Wall clock time and date at job start Mon Mar 8 2021 11:24:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42901 * 113.99953 * 2 1 4 4 C 1.52998 * 112.84889 * 293.95859 * 3 2 1 5 5 F 1.39897 * 109.47114 * 196.21035 * 4 3 2 6 6 F 1.39899 * 109.47052 * 316.21493 * 4 3 2 7 7 F 1.39908 * 109.47119 * 76.21549 * 4 3 2 8 8 C 1.53777 * 113.61550 * 162.65213 * 3 2 1 9 9 C 1.53785 * 87.08174 * 270.88490 * 8 3 2 10 10 H 1.08999 * 113.68873 * 220.00992 * 9 8 3 11 11 C 1.52997 * 113.61590 * 89.11770 * 9 8 3 12 12 S 1.81392 * 109.47350 * 87.50106 * 11 9 8 13 13 O 1.42102 * 110.54187 * 72.37933 * 12 11 9 14 14 O 1.42095 * 110.54450 * 295.62964 * 12 11 9 15 15 O 1.52203 * 104.45021 * 184.00395 * 12 11 9 16 16 C 1.35903 * 113.99756 * 75.62186 * 15 12 11 17 17 C 1.38714 * 120.04879 * 95.46580 * 16 15 12 18 18 C 1.50697 * 120.01288 * 359.97252 * 17 16 15 19 19 O 1.42905 * 109.46970 * 75.11623 * 18 17 16 20 20 Si 1.86302 * 109.47022 * 195.11068 * 18 17 16 21 21 C 1.38175 * 119.97043 * 179.73983 * 17 16 15 22 22 C 1.38271 * 120.05668 * 0.53139 * 21 17 16 23 23 I 2.09502 * 119.95607 * 179.69883 * 22 21 17 24 24 C 1.38428 * 120.09224 * 359.72251 * 22 21 17 25 25 Br 1.89101 * 119.98713 * 180.02562 * 24 22 21 26 26 C 1.38210 * 120.02881 * 0.02562 * 24 22 21 27 27 C 1.53781 * 87.07901 * 334.56617 * 9 8 3 28 28 H 1.09000 * 109.47169 * 65.33421 * 1 2 3 29 29 H 1.08997 * 109.46931 * 185.33678 * 1 2 3 30 30 H 1.09002 * 109.47129 * 305.33254 * 1 2 3 31 31 H 1.09001 * 113.61586 * 156.33298 * 8 3 2 32 32 H 1.09007 * 113.61460 * 25.42944 * 8 3 2 33 33 H 1.09000 * 109.46919 * 327.50111 * 11 9 8 34 34 H 1.08995 * 109.47211 * 207.50466 * 11 9 8 35 35 H 1.09000 * 109.47316 * 315.11315 * 18 17 16 36 36 H 0.96700 * 113.99974 * 175.02218 * 19 18 17 37 37 H 1.48503 * 110.00122 * 299.99988 * 20 18 17 38 38 H 1.48493 * 109.99981 * 61.31968 * 20 18 17 39 39 H 1.07992 * 119.96959 * 180.22802 * 21 17 16 40 40 H 1.07999 * 120.02992 * 180.02562 * 26 24 22 41 41 H 1.09000 * 113.61257 * 139.98341 * 27 9 8 42 42 H 1.09001 * 113.61520 * 270.88487 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7288 2.0811 -1.2884 5 9 2.6076 3.1656 -1.3812 6 9 1.9109 1.2377 -2.3897 7 9 0.4105 2.5492 -1.2725 8 6 3.4894 1.3212 0.4201 9 6 2.9952 1.4831 1.8674 10 1 3.5906 2.1793 2.4581 11 6 2.7510 0.1536 2.5840 12 16 4.2923 -0.4082 3.3579 13 8 4.6016 0.3915 4.4911 14 8 5.2736 -0.6883 2.3691 15 8 3.9490 -1.7709 3.9426 16 6 3.8625 -2.7632 3.0180 17 6 4.9572 -3.5780 2.7691 18 6 6.2439 -3.3631 3.5236 19 8 6.1021 -3.8564 4.8573 20 14 7.6251 -4.2746 2.6680 21 6 4.8658 -4.5898 1.8326 22 6 3.6876 -4.7838 1.1354 23 53 3.5555 -6.3129 -0.2907 24 6 2.5953 -3.9688 1.3780 25 35 0.9852 -4.2372 0.4233 26 6 2.6810 -2.9589 2.3177 27 6 1.7199 2.1090 1.2786 28 1 -0.3633 0.4289 -0.9339 29 1 -0.3633 -1.0232 0.0956 30 1 -0.3633 0.5943 0.8384 31 1 4.0400 2.1850 0.0475 32 1 4.0052 0.3784 0.2378 33 1 2.4140 -0.5912 1.8630 34 1 1.9879 0.2887 3.3504 35 1 6.4746 -2.2982 3.5527 36 1 6.9158 -3.8205 5.3786 37 1 7.3227 -5.7278 2.6220 38 1 7.8038 -3.7491 1.2907 39 1 5.7169 -5.2265 1.6415 40 1 1.8287 -2.3233 2.5073 41 1 0.8071 1.8023 1.7893 42 1 1.7867 3.1882 1.1407 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). I: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_15786362_17541816.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:24:18 Heat of formation + Delta-G solvation = -228.119959 kcal Electronic energy + Delta-G solvation = -41310.323726 eV Core-core repulsion = 35264.275876 eV Total energy + Delta-G solvation = -6046.047849 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 586.890 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -51.23531 -48.78348 -48.66361 -42.80740 -41.69184 -40.01870 -38.48373 -37.96416 -37.56559 -37.34982 -34.38041 -33.54894 -32.06607 -31.47264 -29.30238 -28.64503 -27.98699 -27.06179 -26.95353 -24.93388 -23.71808 -23.27660 -21.75021 -20.86561 -20.10345 -19.72496 -19.51934 -19.39831 -19.05712 -18.84265 -18.45426 -17.59558 -17.35558 -17.18145 -16.80346 -16.69122 -16.10937 -15.95606 -15.75083 -15.68988 -15.57027 -15.48152 -15.34497 -15.15905 -15.13462 -14.97081 -14.85296 -14.79594 -14.72465 -14.43750 -14.14440 -13.95249 -13.59424 -13.52707 -13.45834 -13.37193 -13.33691 -13.21561 -12.95736 -12.62243 -12.48435 -12.42419 -12.33761 -12.15924 -12.09087 -12.04145 -11.72891 -11.60776 -11.00852 -10.80939 -10.56350 -10.50035 -10.16267 -5.17136 -1.43946 -0.73522 -0.61339 -0.47535 0.05029 0.74751 1.01736 1.45905 1.46638 1.60094 1.76393 1.86292 2.23637 2.40583 2.51614 2.59083 2.67996 2.83689 2.89648 2.94601 2.96041 3.21298 3.24247 3.38523 3.42644 3.54410 3.62037 3.78402 3.85436 3.91341 3.95612 4.04403 4.08001 4.13256 4.17131 4.24194 4.27765 4.29548 4.36803 4.49746 4.52863 4.55340 4.60736 4.91535 5.48669 6.42940 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.331 6.331 3 C 0.041 3.959 4 C 0.438 3.562 5 F -0.174 7.174 6 F -0.172 7.172 7 F -0.181 7.181 8 C -0.125 4.125 9 C -0.090 4.090 10 H 0.111 0.889 11 C -0.648 4.648 12 S 2.585 3.415 13 O -0.911 6.911 14 O -0.939 6.939 15 O -0.649 6.649 16 C 0.121 3.879 17 C -0.023 4.023 18 C -0.090 4.090 19 O -0.536 6.536 20 Si 0.689 3.311 21 C -0.067 4.067 22 C -0.069 4.069 23 I 0.017 6.983 24 C -0.042 4.042 25 Br 0.006 6.994 26 C -0.105 4.105 27 C -0.137 4.137 28 H 0.055 0.945 29 H 0.102 0.898 30 H 0.057 0.943 31 H 0.127 0.873 32 H 0.108 0.892 33 H 0.151 0.849 34 H 0.151 0.849 35 H 0.085 0.915 36 H 0.388 0.612 37 H -0.239 1.239 38 H -0.238 1.238 39 H 0.153 0.847 40 H 0.163 0.837 41 H 0.099 0.901 42 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.205 0.080 1.335 1.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 O -0.249 6.249 3 C -0.002 4.002 4 C 0.383 3.617 5 F -0.155 7.155 6 F -0.153 7.153 7 F -0.162 7.162 8 C -0.162 4.162 9 C -0.110 4.110 10 H 0.129 0.871 11 C -0.775 4.775 12 S 2.680 3.320 13 O -0.910 6.910 14 O -0.938 6.938 15 O -0.607 6.607 16 C 0.078 3.922 17 C -0.028 4.028 18 C -0.200 4.200 19 O -0.343 6.343 20 Si 0.587 3.413 21 C -0.088 4.088 22 C -0.212 4.212 23 I 0.166 6.834 24 C -0.125 4.125 25 Br 0.092 6.908 26 C -0.128 4.128 27 C -0.175 4.175 28 H 0.074 0.926 29 H 0.120 0.880 30 H 0.075 0.925 31 H 0.145 0.855 32 H 0.127 0.873 33 H 0.169 0.831 34 H 0.169 0.831 35 H 0.103 0.897 36 H 0.237 0.763 37 H -0.163 1.163 38 H -0.162 1.162 39 H 0.170 0.830 40 H 0.180 0.820 41 H 0.118 0.882 42 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -0.164 -1.871 -0.485 1.940 hybrid contribution -1.240 1.870 0.685 2.346 sum -1.404 -0.001 0.200 1.418 Atomic orbital electron populations 1.23179 0.79390 1.04401 1.01830 1.88054 1.21197 1.21763 1.93846 1.23936 0.99586 0.86519 0.90140 1.21096 0.74369 0.78713 0.87486 1.93185 1.69041 1.56734 1.96577 1.93231 1.94854 1.70638 1.56619 1.93200 1.36715 1.89468 1.96833 1.23478 0.91703 1.06977 0.93992 1.21683 0.99501 0.93863 0.95952 0.87118 1.30950 1.24259 1.08209 1.14037 1.05899 0.77023 0.74054 0.75056 1.93693 1.82177 1.66449 1.48635 1.93667 1.56072 1.81028 1.63014 1.85771 1.90659 1.34423 1.49884 1.17597 0.94047 0.91222 0.89325 1.19548 0.94005 0.93865 0.95383 1.24803 1.00718 1.05156 0.89350 1.86501 1.39274 1.86299 1.22204 0.94710 0.84679 0.79360 0.82508 1.20953 0.97084 0.96331 0.94393 1.24749 0.94900 1.00096 1.01476 1.97077 1.99069 1.39567 1.47681 1.21562 0.94015 0.97914 0.99037 1.96904 1.25591 1.96092 1.72218 1.21353 0.97321 0.98917 0.95212 1.23598 0.99197 1.01139 0.93574 0.92605 0.87955 0.92457 0.85538 0.87321 0.83073 0.83133 0.89739 0.76340 1.16348 1.16175 0.83002 0.81991 0.88238 0.86687 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.29 101.05 1.04 1.02 16 2 O -0.33 0.34 8.36 -35.23 -0.29 0.04 16 3 C 0.04 -0.05 0.85 -89.81 -0.08 -0.12 16 4 C 0.44 0.22 2.52 37.16 0.09 0.31 16 5 F -0.17 -0.11 15.82 2.25 0.04 -0.07 16 6 F -0.17 -0.40 17.10 2.25 0.04 -0.36 16 7 F -0.18 -0.13 15.42 2.25 0.03 -0.10 16 8 C -0.12 0.21 6.89 -25.92 -0.18 0.03 16 9 C -0.09 0.24 3.84 -89.81 -0.35 -0.11 16 10 H 0.11 -0.43 8.13 -51.93 -0.42 -0.85 16 11 C -0.65 1.59 5.05 37.16 0.19 1.78 16 12 S 2.58 2.79 4.98 -107.50 -0.54 2.25 16 13 O -0.91 -3.65 18.09 -67.04 -1.21 -4.86 16 14 O -0.94 -2.17 14.95 -67.04 -1.00 -3.18 16 15 O -0.65 -1.15 9.40 -51.76 -0.49 -1.64 16 16 C 0.12 0.22 4.68 -39.22 -0.18 0.04 16 17 C -0.02 -0.06 4.82 -104.47 -0.50 -0.56 16 18 C -0.09 -0.10 2.32 36.00 0.08 -0.01 16 19 O -0.54 -0.33 12.93 -35.23 -0.46 -0.78 16 20 Si 0.69 -0.73 30.13 -169.99 -5.12 -5.86 16 21 C -0.07 -0.12 8.36 -39.59 -0.33 -0.45 16 22 C -0.07 -0.10 6.20 -39.50 -0.25 -0.34 16 23 I 0.02 0.01 38.57 -73.02 -2.82 -2.80 16 24 C -0.04 -0.03 6.22 -39.52 -0.25 -0.28 16 25 Br 0.01 0.00 31.96 -68.01 -2.17 -2.17 16 26 C -0.10 0.00 8.17 -39.41 -0.32 -0.32 16 27 C -0.14 0.44 6.50 -25.92 -0.17 0.27 16 28 H 0.06 -0.09 6.73 -51.93 -0.35 -0.44 16 29 H 0.10 -0.37 8.14 -51.93 -0.42 -0.80 16 30 H 0.06 -0.23 6.53 -51.93 -0.34 -0.57 16 31 H 0.13 -0.37 7.02 -51.93 -0.36 -0.73 16 32 H 0.11 -0.13 8.02 -51.92 -0.42 -0.55 16 33 H 0.15 -0.44 3.82 -51.92 -0.20 -0.64 16 34 H 0.15 -0.77 8.14 -51.93 -0.42 -1.19 16 35 H 0.08 0.08 6.13 -51.93 -0.32 -0.24 16 36 H 0.39 -1.77 8.62 45.56 0.39 -1.38 16 37 H -0.24 -0.06 6.74 56.52 0.38 0.32 16 38 H -0.24 -0.27 7.11 56.52 0.40 0.13 16 39 H 0.15 0.13 4.90 -52.49 -0.26 -0.13 16 40 H 0.16 -0.50 6.78 -52.49 -0.36 -0.85 16 41 H 0.10 -0.44 6.62 -51.93 -0.34 -0.78 16 42 H 0.11 -0.47 8.06 -51.93 -0.42 -0.89 16 LS Contribution 405.91 15.07 6.12 6.12 Total: 0.00 -9.22 405.91 -12.52 -21.74 By element: Atomic # 1 Polarization: -6.13 SS G_CDS: -3.45 Total: -9.58 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -1.19 Total: 1.25 kcal Atomic # 8 Polarization: -6.96 SS G_CDS: -3.45 Total: -10.41 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.11 Total: -0.53 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.12 Total: -5.86 kcal Atomic # 16 Polarization: 2.79 SS G_CDS: -0.54 Total: 2.25 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -2.17 Total: -2.17 kcal Atomic # 53 Polarization: 0.01 SS G_CDS: -2.82 Total: -2.80 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.22 -12.52 -21.74 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15786362_17541816.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -206.380 kcal (2) G-P(sol) polarization free energy of solvation -9.219 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -215.599 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.740 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds