Wall clock time and date at job start Mon Mar 8 2021 12:05:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.45199 * 109.47228 * 2 1 4 4 C 1.34225 * 116.99744 * 180.02562 * 3 2 1 5 5 O 1.20825 * 120.00043 * 359.97438 * 4 3 2 6 6 C 1.50704 * 120.00024 * 180.27635 * 4 3 2 7 7 H 1.08993 * 112.84902 * 48.52729 * 6 4 3 8 8 C 1.53781 * 113.61393 * 179.72418 * 6 4 3 9 9 C 1.53779 * 87.07796 * 139.98027 * 8 6 4 10 10 F 1.39903 * 113.61466 * 219.92991 * 9 8 6 11 11 C 1.53005 * 113.61711 * 89.11595 * 9 8 6 12 12 S 1.81395 * 109.47182 * 184.99832 * 11 9 8 13 13 O 1.42098 * 110.54200 * 286.45975 * 12 11 9 14 14 O 1.42098 * 110.54447 * 63.21795 * 12 11 9 15 15 O 1.52209 * 104.44554 * 174.83788 * 12 11 9 16 16 C 1.35643 * 113.99832 * 75.50949 * 15 12 11 17 17 C 1.40191 * 120.15842 * 95.71804 * 16 15 12 18 18 C 1.47401 * 120.19678 * 359.97149 * 17 16 15 19 19 O 1.21512 * 119.99954 * 355.28418 * 18 17 16 20 20 O 1.34748 * 120.00237 * 175.28761 * 18 17 16 21 21 C 1.45201 * 117.00432 * 179.97438 * 20 18 17 22 22 C 1.39772 * 119.60666 * 179.70243 * 17 16 15 23 23 C 1.37765 * 119.89701 * 0.60711 * 22 17 16 24 24 C 1.38564 * 120.30952 * 359.66498 * 23 22 17 25 25 C 1.50706 * 119.79643 * 179.97438 * 24 23 22 26 26 O 1.42892 * 109.46967 * 120.01934 * 25 24 23 27 27 Si 1.86306 * 109.47202 * 0.02562 * 25 24 23 28 28 C 1.38041 * 120.40574 * 0.02562 * 24 23 22 29 29 C 1.53773 * 87.08474 * 334.56813 * 9 8 6 30 30 H 1.08999 * 109.46862 * 59.99650 * 1 2 3 31 31 H 1.09001 * 109.47370 * 179.97438 * 1 2 3 32 32 H 1.09004 * 109.46754 * 299.99991 * 1 2 3 33 33 H 1.09004 * 109.46754 * 240.00009 * 2 1 3 34 34 H 1.08999 * 109.46862 * 120.00350 * 2 1 3 35 35 H 1.09003 * 113.61097 * 254.52451 * 8 6 4 36 36 H 1.08995 * 113.61649 * 25.34471 * 8 6 4 37 37 H 1.08997 * 109.46648 * 304.99951 * 11 9 8 38 38 H 1.09000 * 109.47063 * 64.99228 * 11 9 8 39 39 H 1.09001 * 109.47078 * 299.99998 * 21 20 18 40 40 H 1.09002 * 109.46674 * 59.99466 * 21 20 18 41 41 H 1.08992 * 109.47194 * 179.97438 * 21 20 18 42 42 H 1.07993 * 120.05094 * 180.27751 * 22 17 16 43 43 H 1.07997 * 119.84446 * 179.67956 * 23 22 17 44 44 H 1.08997 * 109.46690 * 240.02094 * 25 24 23 45 45 H 0.96696 * 114.00650 * 300.00060 * 26 25 24 46 46 H 1.48498 * 109.99789 * 58.67836 * 27 25 24 47 47 H 1.48492 * 109.99993 * 179.97438 * 27 25 24 48 48 H 1.07999 * 119.95922 * 180.02562 * 28 24 23 49 49 H 1.09006 * 113.61123 * 270.88741 * 29 9 8 50 50 H 1.08994 * 113.62055 * 139.98667 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9209 2.9373 0.0057 7 1 3.4688 3.5789 0.7619 8 6 5.4584 2.9678 0.0110 9 6 5.3600 4.1452 -0.9733 10 9 6.3176 4.1052 -1.9924 11 6 5.2776 5.5112 -0.2888 12 16 5.0176 6.7993 -1.5391 13 8 6.2114 7.0281 -2.2751 14 8 3.7743 6.6088 -2.2004 15 8 4.8225 8.0762 -0.7339 16 6 5.9693 8.5820 -0.2153 17 6 6.6653 9.5907 -0.8961 18 6 6.1555 10.1068 -2.1793 19 8 5.1776 9.6001 -2.6925 20 8 6.7740 11.1405 -2.7832 21 6 6.2174 11.5959 -4.0446 22 6 7.8425 10.1080 -0.3482 23 6 8.3171 9.6162 0.8480 24 6 7.6291 8.6152 1.5148 25 6 8.1591 8.0853 2.8223 26 8 7.1902 8.2989 3.8506 27 14 9.7358 8.9760 3.2601 28 6 6.4619 8.0996 0.9883 29 6 3.9912 3.5811 -1.3890 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3633 0.5139 0.8900 33 1 1.8933 -0.5139 -0.8900 34 1 1.8933 -0.5139 0.8900 35 1 5.8863 3.2400 0.9759 36 1 5.9143 2.0755 -0.4177 37 1 4.4457 5.5150 0.4154 38 1 6.2071 5.7062 0.2460 39 1 6.2383 10.7797 -4.7668 40 1 5.1878 11.9194 -3.8917 41 1 6.8080 12.4306 -4.4220 42 1 8.3820 10.8882 -0.8643 43 1 9.2296 10.0129 1.2680 44 1 8.3590 7.0180 2.7274 45 1 6.9634 9.2285 3.9904 46 1 9.4831 10.4359 3.3609 47 1 10.2682 8.4630 4.5478 48 1 5.9312 7.3198 1.5143 49 1 4.0461 2.8570 -2.2019 50 1 3.2348 4.3481 -1.5546 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16464680_15494190.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:05:28 Heat of formation + Delta-G solvation = -275.406941 kcal Electronic energy + Delta-G solvation = -42563.873536 eV Core-core repulsion = 36760.779694 eV Total energy + Delta-G solvation = -5803.093842 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.116 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -49.03519 -42.81689 -41.87549 -41.06052 -40.11587 -39.64508 -38.30438 -37.86148 -37.50319 -37.45384 -37.14173 -33.52818 -32.82502 -32.23907 -31.54813 -29.18152 -27.59747 -27.42300 -27.13641 -25.15335 -24.19976 -24.05920 -22.75385 -22.39719 -21.52694 -20.47627 -19.75637 -19.48021 -19.14862 -19.00014 -18.65900 -18.24610 -18.05576 -17.91808 -17.63496 -17.38578 -17.11940 -16.91135 -16.63151 -16.52502 -16.34823 -16.19570 -16.10655 -15.59551 -15.45751 -15.26690 -14.90081 -14.67096 -14.56487 -14.50557 -14.34141 -14.24649 -14.03977 -13.81166 -13.78079 -13.65460 -13.42695 -13.33233 -13.23787 -13.13511 -13.09752 -13.03922 -12.95351 -12.81556 -12.59749 -12.58276 -12.51806 -12.10992 -11.98462 -11.81732 -11.66615 -11.55885 -11.52426 -11.43808 -11.05741 -10.56397 -10.43493 -5.19205 -1.40585 -0.80623 -0.35755 0.80916 0.97517 1.05191 1.22304 1.35865 1.46098 1.52154 1.74749 2.09309 2.27044 2.52041 2.64793 2.80835 2.88261 2.92141 3.03860 3.06889 3.08655 3.18540 3.35049 3.45218 3.57025 3.64814 3.69727 3.75593 3.83226 3.93302 3.96762 4.01158 4.08501 4.17214 4.26021 4.26756 4.27808 4.29586 4.36950 4.40067 4.46095 4.48079 4.57532 4.62174 4.63984 4.70021 4.76215 4.78725 4.89464 5.00345 5.15433 5.24021 5.40055 6.06618 6.57595 6.65843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.500 6.500 6 C -0.109 4.109 7 H 0.136 0.864 8 C -0.120 4.120 9 C 0.104 3.896 10 F -0.179 7.179 11 C -0.681 4.681 12 S 2.603 3.397 13 O -0.925 6.925 14 O -0.901 6.901 15 O -0.647 6.647 16 C 0.133 3.867 17 C -0.096 4.096 18 C 0.511 3.489 19 O -0.488 6.488 20 O -0.350 6.350 21 C 0.035 3.965 22 C -0.034 4.034 23 C -0.113 4.113 24 C -0.063 4.063 25 C -0.084 4.084 26 O -0.525 6.525 27 Si 0.691 3.309 28 C -0.129 4.129 29 C -0.152 4.152 30 H 0.069 0.931 31 H 0.082 0.918 32 H 0.068 0.932 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.100 0.900 36 H 0.122 0.878 37 H 0.162 0.838 38 H 0.155 0.845 39 H 0.069 0.931 40 H 0.067 0.933 41 H 0.108 0.892 42 H 0.163 0.837 43 H 0.151 0.849 44 H 0.130 0.870 45 H 0.381 0.619 46 H -0.253 1.253 47 H -0.251 1.251 48 H 0.156 0.844 49 H 0.117 0.883 50 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.393 3.007 4.387 6.309 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.387 6.387 6 C -0.128 4.128 7 H 0.154 0.846 8 C -0.158 4.158 9 C 0.085 3.915 10 F -0.159 7.159 11 C -0.804 4.804 12 S 2.694 3.306 13 O -0.923 6.923 14 O -0.900 6.900 15 O -0.605 6.605 16 C 0.090 3.910 17 C -0.099 4.099 18 C 0.354 3.646 19 O -0.376 6.376 20 O -0.267 6.267 21 C -0.058 4.058 22 C -0.052 4.052 23 C -0.131 4.131 24 C -0.064 4.064 25 C -0.194 4.194 26 O -0.331 6.331 27 Si 0.591 3.409 28 C -0.149 4.149 29 C -0.189 4.189 30 H 0.088 0.912 31 H 0.101 0.899 32 H 0.087 0.913 33 H 0.091 0.909 34 H 0.090 0.910 35 H 0.118 0.882 36 H 0.140 0.860 37 H 0.180 0.820 38 H 0.173 0.827 39 H 0.088 0.912 40 H 0.086 0.914 41 H 0.127 0.873 42 H 0.181 0.819 43 H 0.168 0.832 44 H 0.148 0.852 45 H 0.229 0.771 46 H -0.178 1.178 47 H -0.175 1.175 48 H 0.173 0.827 49 H 0.136 0.864 50 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 3.439 2.791 4.186 6.094 hybrid contribution -1.250 -0.156 0.709 1.445 sum 2.189 2.635 4.895 5.975 Atomic orbital electron populations 1.21832 0.92186 1.03341 1.03779 1.23133 0.95733 0.79564 1.02877 1.86513 1.23945 1.33021 1.83535 1.23105 0.80932 0.91718 0.72448 1.90702 1.60530 1.42645 1.44825 1.22295 0.97264 0.92314 1.00932 0.84648 1.23606 0.93550 0.98024 1.00618 1.21497 0.88953 0.93238 0.87847 1.92999 1.65444 1.97226 1.60272 1.31460 1.14524 1.13724 1.20700 1.05530 0.75457 0.74450 0.75138 1.93664 1.49635 1.81082 1.67929 1.93653 1.43341 1.83844 1.69118 1.85754 1.41249 1.57684 1.75823 1.17966 0.82668 0.96640 0.93686 1.19288 0.97605 0.99021 0.93985 1.20645 0.81177 0.78259 0.84502 1.90877 1.25269 1.57022 1.64417 1.86490 1.55781 1.46805 1.37575 1.23425 1.00164 1.00543 0.81710 1.21509 0.92340 0.97319 0.94027 1.21281 1.00295 0.96148 0.95363 1.20487 0.93885 0.95013 0.96993 1.25245 1.01388 1.08198 0.84543 1.86634 1.59917 1.31696 1.54869 0.94826 0.80132 0.79173 0.86781 1.21229 0.97413 1.02810 0.93403 1.23911 0.96005 1.02265 0.96739 0.91237 0.89918 0.91323 0.90938 0.90972 0.88172 0.86018 0.82001 0.82655 0.91193 0.91392 0.87322 0.81946 0.83189 0.85233 0.77112 1.17758 1.17531 0.82689 0.86421 0.86775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.61 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.35 -0.58 10.22 -39.25 -0.40 -0.98 16 4 C 0.48 0.86 7.48 36.01 0.27 1.13 16 5 O -0.50 -2.21 15.65 -18.75 -0.29 -2.51 16 6 C -0.11 0.10 3.91 -90.96 -0.36 -0.25 16 7 H 0.14 -0.52 7.61 -51.93 -0.40 -0.91 16 8 C -0.12 0.13 6.89 -25.92 -0.18 -0.05 16 9 C 0.10 0.03 1.74 -89.81 -0.16 -0.13 16 10 F -0.18 -0.54 16.76 2.25 0.04 -0.50 16 11 C -0.68 1.02 4.68 37.16 0.17 1.19 16 12 S 2.60 9.69 4.24 -107.50 -0.46 9.24 16 13 O -0.92 -5.59 15.28 -69.03 -1.06 -6.64 16 14 O -0.90 -5.88 16.74 -67.04 -1.12 -7.00 16 15 O -0.65 -2.14 8.45 -54.06 -0.46 -2.60 16 16 C 0.13 0.21 4.71 -38.67 -0.18 0.03 16 17 C -0.10 -0.17 5.42 -104.86 -0.57 -0.74 16 18 C 0.51 2.13 7.55 34.46 0.26 2.40 16 19 O -0.49 -3.58 13.67 -28.54 -0.39 -3.97 16 20 O -0.35 -0.62 9.83 -40.62 -0.40 -1.02 16 21 C 0.03 -0.01 10.57 101.05 1.07 1.06 16 22 C -0.03 0.07 9.61 -39.18 -0.38 -0.31 16 23 C -0.11 0.42 8.64 -39.63 -0.34 0.08 16 24 C -0.06 0.20 5.39 -104.57 -0.56 -0.36 16 25 C -0.08 0.34 2.81 36.01 0.10 0.44 16 26 O -0.52 1.34 12.76 -35.23 -0.45 0.89 16 27 Si 0.69 -2.97 29.77 -169.99 -5.06 -8.03 16 28 C -0.13 0.23 8.01 -39.48 -0.32 -0.08 16 29 C -0.15 -0.02 6.97 -25.92 -0.18 -0.20 16 30 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 33 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 34 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 35 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 36 H 0.12 0.01 7.43 -51.93 -0.39 -0.37 16 37 H 0.16 -0.83 7.31 -51.93 -0.38 -1.21 16 38 H 0.16 -0.66 6.49 -51.92 -0.34 -1.00 16 39 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 41 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 42 H 0.16 -0.70 7.62 -52.49 -0.40 -1.10 16 43 H 0.15 -0.96 4.85 -52.49 -0.25 -1.22 16 44 H 0.13 -0.68 7.96 -51.93 -0.41 -1.10 16 45 H 0.38 -2.00 8.70 45.56 0.40 -1.60 16 46 H -0.25 0.68 7.11 56.52 0.40 1.08 16 47 H -0.25 0.14 7.11 56.52 0.40 0.54 16 48 H 0.16 -0.67 6.93 -52.49 -0.36 -1.04 16 49 H 0.12 0.00 8.09 -51.93 -0.42 -0.42 16 50 H 0.11 -0.01 6.82 -51.93 -0.35 -0.37 16 LS Contribution 431.47 15.07 6.50 6.50 Total: 0.00 -14.56 431.47 -10.59 -25.14 By element: Atomic # 1 Polarization: -7.27 SS G_CDS: -6.31 Total: -13.58 kcal Atomic # 6 Polarization: 5.79 SS G_CDS: -0.74 Total: 5.05 kcal Atomic # 8 Polarization: -19.26 SS G_CDS: -4.57 Total: -23.83 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.04 Total: -0.50 kcal Atomic # 14 Polarization: -2.97 SS G_CDS: -5.06 Total: -8.03 kcal Atomic # 16 Polarization: 9.69 SS G_CDS: -0.46 Total: 9.24 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -14.56 -10.59 -25.14 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16464680_15494190.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -250.262 kcal (2) G-P(sol) polarization free energy of solvation -14.558 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -264.820 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.144 kcal (6) G-S(sol) free energy of system = (1) + (5) -275.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds