Wall clock time and date at job start Mon Mar 8 2021 10:44:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13605 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 H 1.09001 * 109.47503 * 26.11115 * 3 2 1 5 5 C 1.53001 * 109.46990 * 146.11484 * 3 2 1 6 6 C 1.53002 * 109.47211 * 180.02562 * 5 3 2 7 7 C 1.53005 * 109.46592 * 299.99262 * 6 5 3 8 8 H 1.09001 * 109.47158 * 300.00444 * 7 6 5 9 9 C 1.52994 * 109.46997 * 180.02562 * 7 6 5 10 10 N 1.46502 * 109.47540 * 175.00219 * 9 7 6 11 11 S 1.65595 * 120.00682 * 163.99130 * 10 9 7 12 12 O 1.42093 * 106.40444 * 177.82091 * 11 10 9 13 13 O 1.42108 * 106.39974 * 310.74566 * 11 10 9 14 14 C 1.76201 * 107.21596 * 64.28201 * 11 10 9 15 15 C 1.38212 * 119.99908 * 64.16688 * 14 11 10 16 16 C 1.50697 * 119.99860 * 0.02562 * 15 14 11 17 17 O 1.42902 * 109.47061 * 284.11933 * 16 15 14 18 18 Si 1.86298 * 109.46998 * 164.12178 * 16 15 14 19 19 C 1.38260 * 120.00004 * 179.74108 * 15 14 11 20 20 C 1.38221 * 119.99701 * 0.53591 * 19 15 14 21 21 C 1.38260 * 119.99917 * 359.73863 * 20 19 15 22 22 C 1.38213 * 119.99987 * 359.97438 * 21 20 19 23 23 C 1.53001 * 109.46740 * 60.00450 * 7 6 5 24 24 C 1.52998 * 109.47423 * 299.99447 * 23 7 6 25 25 H 1.09008 * 109.46623 * 299.99588 * 5 3 2 26 26 H 1.08992 * 109.47267 * 59.99607 * 5 3 2 27 27 H 1.08992 * 109.47666 * 59.99435 * 6 5 3 28 28 H 1.08995 * 109.47347 * 180.02562 * 6 5 3 29 29 H 1.08999 * 109.47231 * 295.00137 * 9 7 6 30 30 H 1.09001 * 109.47343 * 54.99910 * 9 7 6 31 31 H 0.97005 * 119.99272 * 343.99538 * 10 9 7 32 32 H 1.09000 * 109.47312 * 44.12267 * 16 15 14 33 33 H 0.96697 * 113.99509 * 180.02562 * 17 16 15 34 34 H 1.48503 * 110.00244 * 60.00023 * 18 16 15 35 35 H 1.48503 * 110.00370 * 181.31844 * 18 16 15 36 36 H 1.07996 * 120.00462 * 180.29421 * 19 15 14 37 37 H 1.07997 * 119.99762 * 179.76995 * 20 19 15 38 38 H 1.07995 * 119.99641 * 180.02562 * 21 20 19 39 39 H 1.07999 * 119.99704 * 179.97438 * 22 21 20 40 40 H 1.09008 * 109.46623 * 179.97438 * 23 7 6 41 41 H 1.08992 * 109.47267 * 59.99980 * 23 7 6 42 42 H 1.09001 * 109.47401 * 300.00572 * 24 23 7 43 43 H 1.08991 * 109.47879 * 180.02562 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9718 -0.9220 -0.4523 5 6 3.1174 1.1984 -0.8042 6 6 4.6475 1.1988 -0.8048 7 6 5.1579 1.2966 0.6343 8 1 4.7944 2.2192 1.0868 9 6 6.6878 1.2976 0.6338 10 7 7.1765 1.5110 1.9983 11 16 8.7525 1.1709 2.3761 12 8 8.9240 1.5276 3.7408 13 8 9.0128 -0.1332 1.8749 14 6 9.7621 2.2731 1.4431 15 6 9.6926 3.6345 1.6713 16 6 8.7539 4.1761 2.7184 17 8 7.4149 4.1441 2.2201 18 14 9.2235 5.9326 3.1246 19 6 10.4887 4.4990 0.9429 20 6 11.3459 4.0027 -0.0211 21 6 11.4112 2.6413 -0.2532 22 6 10.6197 1.7766 0.4790 23 6 4.6484 0.0989 1.4385 24 6 3.1184 0.0984 1.4391 25 1 2.7541 1.1285 -1.8296 26 1 2.7537 2.1209 -0.3520 27 1 5.0109 0.2762 -1.2573 28 1 5.0104 2.0523 -1.3774 29 1 7.0517 0.3393 0.2633 30 1 7.0504 2.0979 -0.0113 31 1 6.5768 1.8515 2.6805 32 1 8.8214 3.5646 3.6182 33 1 6.7555 4.4794 2.8428 34 1 9.1354 6.7767 1.9060 35 1 8.3251 6.4677 4.1791 36 1 10.4379 5.5624 1.1244 37 1 11.9650 4.6783 -0.5926 38 1 12.0813 2.2535 -1.0062 39 1 10.6704 0.7132 0.2974 40 1 5.0124 0.1684 2.4637 41 1 5.0119 -0.8237 0.9860 42 1 2.7549 1.0210 1.8916 43 1 2.7555 -0.7545 2.0123 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16496582_2726874.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:44:34 Heat of formation + Delta-G solvation = -55.494034 kcal Electronic energy + Delta-G solvation = -27912.789719 eV Core-core repulsion = 24051.245130 eV Total energy + Delta-G solvation = -3861.544589 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.118 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -40.69337 -40.42084 -38.45491 -37.79903 -37.46040 -36.82556 -35.91368 -33.04953 -32.43962 -32.32100 -31.88830 -27.09568 -26.91398 -24.45913 -23.89141 -23.19981 -22.70688 -21.24081 -20.43675 -19.09691 -18.78072 -18.68884 -18.33055 -17.53628 -17.13478 -16.57614 -16.42340 -15.96952 -15.84482 -15.52337 -15.39231 -15.20445 -15.13230 -14.82908 -14.44381 -14.31551 -14.11547 -13.93815 -13.73135 -13.58003 -13.40630 -13.38345 -13.33347 -13.03978 -12.98364 -12.91610 -12.69813 -12.29055 -12.26951 -12.16419 -12.02684 -11.70252 -11.65795 -11.45482 -11.24538 -10.62429 -10.48141 -10.41188 -10.09800 -5.06874 -0.59463 -0.28826 0.08379 1.10936 1.47556 1.78601 1.80742 1.83750 1.96836 2.30417 2.70671 2.85580 3.06720 3.38086 3.50426 3.52589 3.59511 3.61805 3.76090 3.83620 3.91156 3.99633 4.07579 4.10917 4.19038 4.22749 4.32446 4.33382 4.37804 4.40136 4.52640 4.54578 4.67014 4.73291 4.79156 4.85447 4.90094 4.94585 4.98320 5.01135 5.05518 5.09221 5.18808 5.21806 5.33500 5.66554 5.99770 6.19895 6.61647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.206 3.794 3 C 0.007 3.993 4 H 0.116 0.884 5 C -0.110 4.110 6 C -0.113 4.113 7 C -0.093 4.093 8 H 0.084 0.916 9 C 0.126 3.874 10 N -1.098 6.098 11 S 2.699 3.301 12 O -0.960 6.960 13 O -0.958 6.958 14 C -0.659 4.659 15 C 0.036 3.964 16 C -0.134 4.134 17 O -0.526 6.526 18 Si 0.700 3.300 19 C -0.140 4.140 20 C -0.057 4.057 21 C -0.135 4.135 22 C -0.022 4.022 23 C -0.116 4.116 24 C -0.112 4.112 25 H 0.075 0.925 26 H 0.073 0.927 27 H 0.073 0.927 28 H 0.074 0.926 29 H 0.079 0.921 30 H 0.067 0.933 31 H 0.418 0.582 32 H 0.113 0.887 33 H 0.383 0.617 34 H -0.253 1.253 35 H -0.255 1.255 36 H 0.136 0.864 37 H 0.136 0.864 38 H 0.136 0.864 39 H 0.146 0.854 40 H 0.073 0.927 41 H 0.074 0.926 42 H 0.072 0.928 43 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.874 3.202 -1.684 6.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.109 5.109 2 C -0.112 4.112 3 C -0.015 4.015 4 H 0.133 0.867 5 C -0.149 4.149 6 C -0.151 4.151 7 C -0.113 4.113 8 H 0.102 0.898 9 C 0.000 4.000 10 N -0.859 5.859 11 S 2.788 3.212 12 O -0.950 6.950 13 O -0.948 6.948 14 C -0.746 4.746 15 C 0.035 3.965 16 C -0.243 4.243 17 O -0.334 6.334 18 Si 0.601 3.399 19 C -0.159 4.159 20 C -0.076 4.076 21 C -0.153 4.153 22 C -0.041 4.041 23 C -0.154 4.154 24 C -0.151 4.151 25 H 0.093 0.907 26 H 0.091 0.909 27 H 0.092 0.908 28 H 0.093 0.907 29 H 0.097 0.903 30 H 0.085 0.915 31 H 0.254 0.746 32 H 0.130 0.870 33 H 0.231 0.769 34 H -0.178 1.178 35 H -0.180 1.180 36 H 0.154 0.846 37 H 0.154 0.846 38 H 0.154 0.846 39 H 0.164 0.836 40 H 0.092 0.908 41 H 0.092 0.908 42 H 0.091 0.909 43 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 3.608 3.081 -1.751 5.058 hybrid contribution -0.793 0.570 -0.225 1.002 sum 2.815 3.651 -1.976 5.016 Atomic orbital electron populations 1.81281 1.13042 1.08414 1.08189 1.29264 0.95166 0.93353 0.93407 1.18988 0.81138 1.02205 0.99127 0.86663 1.21549 0.96086 0.96928 1.00335 1.21535 0.94290 1.03350 0.95912 1.21387 0.93531 0.99785 0.96596 0.89791 1.21305 0.95134 1.01625 0.81904 1.55210 1.28177 1.83572 1.18966 1.01733 0.72630 0.73537 0.73332 1.93559 1.85316 1.84222 1.31863 1.93590 1.84460 1.35373 1.81407 1.30770 1.17983 1.09629 1.16194 1.18754 0.93210 0.91461 0.93093 1.25427 0.84952 1.14997 0.98909 1.86594 1.14604 1.86534 1.45635 0.94367 0.91073 0.73616 0.80868 1.21282 0.97667 0.99988 0.96915 1.21483 0.95334 0.95841 0.94897 1.21399 0.99991 0.93533 1.00419 1.21063 0.91367 1.00947 0.90725 1.21632 0.93928 0.98657 1.01177 1.21579 0.96331 1.03508 0.93670 0.90674 0.90862 0.90795 0.90718 0.90308 0.91489 0.74619 0.86963 0.76872 1.17774 1.18010 0.84637 0.84648 0.84570 0.83615 0.90815 0.90776 0.90910 0.90717 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -2.01 18.54 42.16 0.78 -1.23 16 2 C 0.21 0.17 14.65 -20.76 -0.30 -0.13 16 3 C 0.01 -0.02 2.56 -93.41 -0.24 -0.26 16 4 H 0.12 -0.54 8.14 -51.93 -0.42 -0.96 16 5 C -0.11 0.43 5.16 -26.73 -0.14 0.29 16 6 C -0.11 0.52 5.20 -26.73 -0.14 0.38 16 7 C -0.09 0.41 2.22 -90.62 -0.20 0.21 16 8 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 9 C 0.13 -0.39 5.61 -4.04 -0.02 -0.41 16 10 N -1.10 2.46 3.75 -10.61 -0.04 2.42 16 11 S 2.70 2.79 5.07 -107.50 -0.54 2.25 16 12 O -0.96 -3.08 15.54 -57.17 -0.89 -3.96 16 13 O -0.96 -3.42 16.45 -57.17 -0.94 -4.37 16 14 C -0.66 -0.45 5.86 -39.58 -0.23 -0.68 16 15 C 0.04 0.01 5.28 -104.62 -0.55 -0.55 16 16 C -0.13 0.14 2.02 36.00 0.07 0.22 16 17 O -0.53 1.30 10.58 -35.23 -0.37 0.92 16 18 Si 0.70 -1.29 30.22 -169.99 -5.14 -6.43 16 19 C -0.14 0.10 8.66 -39.58 -0.34 -0.25 16 20 C -0.06 0.09 10.05 -39.58 -0.40 -0.31 16 21 C -0.13 0.17 10.05 -39.58 -0.40 -0.23 16 22 C -0.02 0.00 9.55 -39.58 -0.38 -0.38 16 23 C -0.12 0.47 5.09 -26.73 -0.14 0.34 16 24 C -0.11 0.41 5.16 -26.73 -0.14 0.27 16 25 H 0.07 -0.28 8.14 -51.92 -0.42 -0.70 16 26 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 27 H 0.07 -0.37 8.14 -51.93 -0.42 -0.79 16 28 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 29 H 0.08 -0.22 7.75 -51.93 -0.40 -0.62 16 30 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 31 H 0.42 -1.67 7.95 -34.47 -0.27 -1.95 16 32 H 0.11 -0.09 5.38 -51.93 -0.28 -0.37 16 33 H 0.38 -2.26 8.74 45.56 0.40 -1.86 16 34 H -0.25 -0.07 6.73 56.52 0.38 0.31 16 35 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 36 H 0.14 -0.28 4.91 -52.49 -0.26 -0.53 16 37 H 0.14 -0.54 8.06 -52.49 -0.42 -0.96 16 38 H 0.14 -0.47 8.06 -52.49 -0.42 -0.90 16 39 H 0.15 -0.13 7.34 -52.49 -0.39 -0.51 16 40 H 0.07 -0.29 7.56 -51.92 -0.39 -0.68 16 41 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 42 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 43 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 LS Contribution 358.26 15.07 5.40 5.40 Total: 0.00 -10.40 358.26 -11.17 -21.57 By element: Atomic # 1 Polarization: -9.20 SS G_CDS: -5.88 Total: -15.08 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -3.55 Total: -1.49 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: 0.74 Total: 1.19 kcal Atomic # 8 Polarization: -5.21 SS G_CDS: -2.20 Total: -7.41 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.14 Total: -6.43 kcal Atomic # 16 Polarization: 2.79 SS G_CDS: -0.54 Total: 2.25 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -10.40 -11.17 -21.57 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16496582_2726874.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.923 kcal (2) G-P(sol) polarization free energy of solvation -10.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.321 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.571 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.494 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds