Wall clock time and date at job start Mon Mar 8 2021 11:43:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.45197 * 109.47390 * 2 1 4 4 C 1.34228 * 117.00422 * 179.97438 * 3 2 1 5 5 O 1.20832 * 119.99661 * 0.02562 * 4 3 2 6 6 C 1.50697 * 120.00193 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.84782 * 50.33763 * 6 4 3 8 8 C 1.53786 * 113.61519 * 181.53173 * 6 4 3 9 9 C 1.53783 * 87.08050 * 140.06465 * 8 6 4 10 10 F 1.39895 * 113.61426 * 220.01656 * 9 8 6 11 11 C 1.53005 * 113.61139 * 89.20025 * 9 8 6 12 12 N 1.46497 * 109.46839 * 179.97438 * 11 9 8 13 13 S 1.65598 * 119.99528 * 165.00125 * 12 11 9 14 14 O 1.42104 * 106.40088 * 178.53921 * 13 12 11 15 15 O 1.42096 * 106.40491 * 311.46183 * 13 12 11 16 16 C 1.76200 * 107.22126 * 65.00233 * 13 12 11 17 17 C 1.33383 * 125.20587 * 179.71472 * 16 13 12 18 18 C 1.50701 * 122.54239 * 0.02562 * 17 16 13 19 19 O 1.42897 * 109.46963 * 74.99665 * 18 17 16 20 20 Si 1.86298 * 109.47334 * 194.99677 * 18 17 16 21 21 C 1.38427 * 114.92072 * 179.85767 * 17 16 13 22 22 C 1.33393 * 114.92037 * 0.43504 * 21 17 16 23 23 S 1.75879 * 109.59265 * 359.76974 * 22 21 17 24 24 C 1.53781 * 113.61630 * 279.14121 * 6 4 3 25 25 H 1.09000 * 109.46631 * 59.99825 * 1 2 3 26 26 H 1.08996 * 109.46994 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.46790 * 300.00068 * 1 2 3 28 28 H 1.08997 * 109.47217 * 239.99615 * 2 1 3 29 29 H 1.09007 * 109.47021 * 119.99381 * 2 1 3 30 30 H 1.08992 * 113.61675 * 254.61723 * 8 6 4 31 31 H 1.09000 * 113.60973 * 25.52011 * 8 6 4 32 32 H 1.08994 * 109.46944 * 300.00084 * 11 9 8 33 33 H 1.09008 * 109.46845 * 59.99940 * 11 9 8 34 34 H 0.96996 * 120.00078 * 345.00061 * 12 11 9 35 35 H 1.08999 * 109.46416 * 314.99653 * 18 17 16 36 36 H 0.96702 * 114.00524 * 60.00068 * 19 18 17 37 37 H 1.48498 * 109.99827 * 58.67905 * 20 18 17 38 38 H 1.48494 * 109.99929 * 179.97438 * 20 18 17 39 39 H 1.08003 * 122.53983 * 180.20165 * 21 17 16 40 40 H 1.08006 * 125.20250 * 179.78808 * 22 21 17 41 41 H 1.08999 * 113.61567 * 334.48200 * 24 6 4 42 42 H 1.08998 * 113.61196 * 105.38554 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.4898 3.5740 0.7727 8 6 5.4579 2.9682 -0.0370 9 6 5.3324 4.1535 -1.0087 10 9 6.2602 4.1208 -2.0552 11 6 5.2711 5.5139 -0.3113 12 7 5.1533 6.5731 -1.3165 13 16 4.6973 8.0988 -0.8620 14 8 4.7102 8.8898 -2.0425 15 8 3.5474 7.9462 -0.0413 16 6 5.9695 8.7356 0.1775 17 6 5.9691 9.9447 0.7406 18 6 4.8458 10.9300 0.5446 19 8 3.7168 10.5259 1.3218 20 14 5.4017 12.6223 1.0901 21 6 7.0771 10.2246 1.5218 22 6 7.9815 9.2462 1.5857 23 16 7.4379 7.8770 0.6250 24 6 3.9501 3.5914 -1.3915 25 1 -0.3632 0.5139 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 1.8934 -0.5139 -0.8899 29 1 1.8934 -0.5138 0.8901 30 1 5.9124 3.2326 0.9178 31 1 5.9017 2.0800 -0.4867 32 1 4.4063 5.5437 0.3515 33 1 6.1803 5.6652 0.2706 34 1 5.3424 6.3807 -2.2482 35 1 4.5693 10.9606 -0.5093 36 1 3.8905 10.4767 2.2718 37 1 6.5948 13.0406 0.3112 38 1 4.3030 13.6032 0.9012 39 1 7.2017 11.1655 2.0374 40 1 8.9061 9.2883 2.1424 41 1 3.9825 2.8733 -2.2109 42 1 3.1882 4.3585 -1.5295 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16501620_13652106.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:43:43 Heat of formation + Delta-G solvation = -168.029930 kcal Electronic energy + Delta-G solvation = -31188.622206 eV Core-core repulsion = 26498.183633 eV Total energy + Delta-G solvation = -4690.438574 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.069 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -48.85848 -41.84597 -40.13473 -39.70222 -38.20023 -37.55146 -37.14306 -36.85425 -36.00292 -32.74222 -31.55807 -29.27846 -28.09106 -27.29056 -26.40826 -24.43309 -24.00084 -22.30810 -21.73448 -20.53792 -20.02966 -19.79843 -19.18901 -18.59921 -18.21447 -17.98673 -17.69023 -17.44044 -16.82441 -16.71385 -16.49591 -16.31515 -16.01098 -15.92137 -15.54284 -15.42039 -15.23023 -15.00080 -14.64616 -14.29750 -14.14381 -14.01501 -13.88900 -13.76699 -13.74750 -13.43615 -13.11825 -13.04057 -13.01772 -12.80768 -12.67765 -12.63117 -12.59259 -12.51803 -12.26452 -12.16433 -11.82858 -11.63740 -11.55294 -11.39486 -10.98310 -10.60867 -10.51987 -9.76942 -5.16073 -0.78684 -0.75778 0.11465 0.48478 1.08377 1.09669 1.15476 1.54708 1.57737 1.75065 1.90422 2.52616 2.72890 2.80981 2.91818 3.11160 3.29071 3.32872 3.36504 3.57008 3.72425 3.84110 3.90108 3.92450 3.94975 3.96783 3.97642 4.07013 4.21482 4.26722 4.29015 4.34056 4.47662 4.53770 4.56949 4.62134 4.71435 4.73368 4.78691 4.92925 4.95891 5.00715 5.41751 5.62526 6.46241 6.68073 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.354 6.354 4 C 0.475 3.525 5 O -0.502 6.502 6 C -0.112 4.112 7 H 0.138 0.862 8 C -0.130 4.130 9 C 0.090 3.910 10 F -0.186 7.186 11 C 0.111 3.889 12 N -1.118 6.118 13 S 2.717 3.283 14 O -0.946 6.946 15 O -0.921 6.921 16 C -0.770 4.770 17 C 0.007 3.993 18 C -0.099 4.099 19 O -0.518 6.518 20 Si 0.707 3.293 21 C -0.157 4.157 22 C -0.161 4.161 23 S 0.203 5.797 24 C -0.137 4.137 25 H 0.068 0.932 26 H 0.082 0.918 27 H 0.068 0.932 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.099 0.901 31 H 0.118 0.882 32 H 0.110 0.890 33 H 0.083 0.917 34 H 0.427 0.573 35 H 0.123 0.877 36 H 0.382 0.618 37 H -0.251 1.251 38 H -0.245 1.245 39 H 0.159 0.841 40 H 0.181 0.819 41 H 0.107 0.893 42 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.244 -0.642 5.520 5.993 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.317 3.683 5 O -0.389 6.389 6 C -0.131 4.131 7 H 0.155 0.845 8 C -0.168 4.168 9 C 0.071 3.929 10 F -0.166 7.166 11 C -0.016 4.016 12 N -0.880 5.880 13 S 2.801 3.199 14 O -0.936 6.936 15 O -0.911 6.911 16 C -0.970 4.970 17 C -0.010 4.010 18 C -0.211 4.211 19 O -0.323 6.323 20 Si 0.607 3.393 21 C -0.187 4.187 22 C -0.298 4.298 23 S 0.469 5.531 24 C -0.175 4.175 25 H 0.087 0.913 26 H 0.100 0.900 27 H 0.087 0.913 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.117 0.883 31 H 0.137 0.863 32 H 0.128 0.872 33 H 0.101 0.899 34 H 0.264 0.736 35 H 0.141 0.859 36 H 0.229 0.771 37 H -0.175 1.175 38 H -0.169 1.169 39 H 0.176 0.824 40 H 0.198 0.802 41 H 0.125 0.875 42 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 2.182 -1.137 4.314 4.966 hybrid contribution 0.437 0.556 -0.222 0.741 sum 2.619 -0.581 4.091 4.892 Atomic orbital electron populations 1.21828 0.92224 1.03309 1.03766 1.23116 0.95699 0.79645 1.02809 1.86516 1.24058 1.32920 1.83563 1.23187 0.80861 0.91853 0.72350 1.90702 1.60542 1.42746 1.44932 1.22362 0.97138 0.92115 1.01456 0.84468 1.23652 0.93679 0.98488 1.00973 1.22342 0.88705 0.95010 0.86890 1.92893 1.67476 1.97299 1.58943 1.21756 1.04306 0.84902 0.90597 1.55526 1.88256 1.26174 1.18077 1.01586 0.73107 0.71779 0.73399 1.93642 1.86372 1.67311 1.46248 1.93662 1.43034 1.84717 1.69650 1.35708 1.22604 1.10482 1.28185 1.19068 0.96125 0.92875 0.92974 1.25407 0.87766 1.07287 1.00689 1.86689 1.31918 1.91151 1.22580 0.94833 0.80649 0.73584 0.90281 1.20221 0.94145 1.01508 1.02848 1.26186 1.03833 0.96979 1.02804 1.84127 1.09645 1.15931 1.43352 1.23685 0.96627 1.01098 0.96083 0.91307 0.89962 0.91281 0.91049 0.90991 0.88294 0.86349 0.87210 0.89908 0.73639 0.85949 0.77053 1.17518 1.16947 0.82371 0.80214 0.87497 0.87915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.66 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.35 -0.40 10.22 -39.25 -0.40 -0.80 16 4 C 0.48 0.54 7.48 36.00 0.27 0.81 16 5 O -0.50 -1.97 15.66 -18.76 -0.29 -2.26 16 6 C -0.11 0.22 3.90 -90.96 -0.36 -0.14 16 7 H 0.14 -0.57 7.66 -51.93 -0.40 -0.96 16 8 C -0.13 0.29 6.88 -25.92 -0.18 0.12 16 9 C 0.09 -0.18 1.90 -89.66 -0.17 -0.35 16 10 F -0.19 -0.04 16.66 2.25 0.04 0.00 16 11 C 0.11 -0.28 5.55 -4.04 -0.02 -0.30 16 12 N -1.12 0.97 5.77 -10.61 -0.06 0.91 16 13 S 2.72 6.13 5.07 -107.50 -0.55 5.59 16 14 O -0.95 -5.10 17.48 -57.17 -1.00 -6.10 16 15 O -0.92 -3.95 16.93 -59.41 -1.01 -4.95 16 16 C -0.77 -0.73 6.46 29.04 0.19 -0.55 16 17 C 0.01 0.00 5.13 -106.25 -0.55 -0.54 16 18 C -0.10 -0.11 2.33 36.01 0.08 -0.02 16 19 O -0.52 -0.65 12.32 -35.88 -0.44 -1.09 16 20 Si 0.71 -0.85 30.25 -169.99 -5.14 -6.00 16 21 C -0.16 0.31 8.74 -41.21 -0.36 -0.05 16 22 C -0.16 0.43 11.23 29.04 0.33 0.75 16 23 S 0.20 -0.33 21.09 -107.50 -2.27 -2.60 16 24 C -0.14 0.28 7.11 -25.78 -0.18 0.10 16 25 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 26 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 0.00 8.13 -51.93 -0.42 -0.43 16 29 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 30 H 0.10 -0.42 8.10 -51.93 -0.42 -0.84 16 31 H 0.12 -0.09 7.46 -51.93 -0.39 -0.48 16 32 H 0.11 -0.41 6.96 -51.93 -0.36 -0.77 16 33 H 0.08 -0.33 6.25 -51.92 -0.32 -0.65 16 34 H 0.43 -0.75 8.19 -34.47 -0.28 -1.03 16 35 H 0.12 0.33 7.23 -51.93 -0.38 -0.05 16 36 H 0.38 -1.32 8.70 45.56 0.40 -0.93 16 37 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 38 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 39 H 0.16 -0.76 5.73 -52.48 -0.30 -1.06 16 40 H 0.18 -0.99 8.06 -52.48 -0.42 -1.41 16 41 H 0.11 -0.17 8.09 -51.93 -0.42 -0.60 16 42 H 0.10 -0.29 8.11 -51.93 -0.42 -0.71 16 LS Contribution 380.08 15.07 5.73 5.73 Total: 0.00 -12.08 380.08 -10.76 -22.84 By element: Atomic # 1 Polarization: -6.94 SS G_CDS: -5.03 Total: -11.97 kcal Atomic # 6 Polarization: 1.05 SS G_CDS: -0.34 Total: 0.71 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -0.06 Total: 0.91 kcal Atomic # 8 Polarization: -12.07 SS G_CDS: -3.14 Total: -15.21 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.04 Total: 0.00 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.14 Total: -6.00 kcal Atomic # 16 Polarization: 5.80 SS G_CDS: -2.81 Total: 2.99 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -12.08 -10.76 -22.84 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16501620_13652106.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.190 kcal (2) G-P(sol) polarization free energy of solvation -12.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.274 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -168.030 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds