Wall clock time and date at job start Mon Mar 8 2021 11:43:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53011 * 1 3 3 O 1.45200 * 109.47113 * 2 1 4 4 C 1.34226 * 116.99601 * 179.97438 * 3 2 1 5 5 O 1.20823 * 120.00248 * 0.02562 * 4 3 2 6 6 C 1.50704 * 119.99748 * 179.97438 * 4 3 2 7 7 H 1.09004 * 112.90427 * 48.75608 * 6 4 3 8 8 C 1.53783 * 113.61208 * 180.02562 * 6 4 3 9 9 C 1.53777 * 87.17408 * 89.16266 * 8 6 4 10 10 F 1.39897 * 113.61351 * 270.84444 * 9 8 6 11 11 C 1.52995 * 113.61645 * 140.01932 * 9 8 6 12 12 N 1.46497 * 109.47245 * 179.97438 * 11 9 8 13 13 S 1.65601 * 120.00113 * 164.04717 * 12 11 9 14 14 O 1.42096 * 106.40428 * 177.81849 * 13 12 11 15 15 O 1.42104 * 106.40045 * 310.72998 * 13 12 11 16 16 C 1.76192 * 107.21907 * 64.27186 * 13 12 11 17 17 C 1.38218 * 120.00106 * 64.19798 * 16 13 12 18 18 C 1.50699 * 119.99676 * 359.97438 * 17 16 13 19 19 O 1.42900 * 109.47024 * 284.12162 * 18 17 16 20 20 Si 1.86295 * 109.46977 * 164.12188 * 18 17 16 21 21 C 1.38258 * 120.00160 * 179.74178 * 17 16 13 22 22 C 1.38211 * 119.99524 * 0.55352 * 21 17 16 23 23 C 1.38262 * 120.00580 * 359.69622 * 22 21 17 24 24 C 1.38213 * 119.99683 * 0.02731 * 23 22 21 25 25 C 1.53785 * 87.08245 * 25.38718 * 9 8 6 26 26 H 1.09000 * 109.46857 * 300.00189 * 1 2 3 27 27 H 1.09004 * 109.46663 * 59.99649 * 1 2 3 28 28 H 1.09001 * 109.47218 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.46684 * 240.00337 * 2 1 3 30 30 H 1.08995 * 109.46665 * 120.00146 * 2 1 3 31 31 H 1.08997 * 113.61585 * 334.57005 * 8 6 4 32 32 H 1.09008 * 113.61027 * 203.75286 * 8 6 4 33 33 H 1.09001 * 109.47245 * 300.00351 * 11 9 8 34 34 H 1.09008 * 109.46957 * 59.99984 * 11 9 8 35 35 H 0.97004 * 120.00190 * 344.04653 * 12 11 9 36 36 H 1.09000 * 109.47611 * 44.11906 * 18 17 16 37 37 H 0.96699 * 114.00488 * 180.02562 * 19 18 17 38 38 H 1.48498 * 110.00248 * 298.67916 * 20 18 17 39 39 H 1.48499 * 110.00050 * 60.00001 * 20 18 17 40 40 H 1.07993 * 120.00171 * 180.27686 * 21 17 16 41 41 H 1.08006 * 119.99884 * 179.72683 * 22 21 17 42 42 H 1.08001 * 120.00229 * 179.97438 * 23 22 21 43 43 H 1.07993 * 120.00018 * 179.97438 * 24 23 22 44 44 H 1.09006 * 113.61291 * 89.11327 * 25 9 8 45 45 H 1.08992 * 113.61854 * 220.01854 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9209 2.9373 0.0000 7 1 3.4710 3.5828 0.7544 8 6 5.4584 2.9679 0.0001 9 6 5.3831 2.9433 -1.5357 10 9 5.3623 1.6527 -2.0751 11 6 6.4079 3.8545 -2.2142 12 7 6.2572 3.7611 -3.6684 13 16 6.9428 4.9075 -4.6472 14 8 6.6649 4.5123 -5.9836 15 8 6.5625 6.1690 -4.1149 16 6 8.6891 4.7884 -4.4460 17 6 9.3524 3.6388 -4.8319 18 6 8.5819 2.4871 -5.4242 19 8 7.8878 1.7938 -4.3851 20 14 9.7622 1.3194 -6.2690 21 6 10.7235 3.5474 -4.6789 22 6 11.4292 4.6011 -4.1295 23 6 10.7650 5.7491 -3.7387 24 6 9.3952 5.8427 -3.8969 25 6 3.9883 3.5763 -1.3991 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8934 -0.5138 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 5.9129 2.0750 0.4293 32 1 5.8767 3.8908 0.4020 33 1 6.2446 4.8845 -1.8970 34 1 7.4138 3.5428 -1.9328 35 1 5.7557 3.0278 -4.0580 36 1 7.8633 2.8661 -6.1509 37 1 7.3697 1.0382 -4.6944 38 1 10.4672 2.0198 -7.3724 39 1 10.7471 0.7955 -5.2888 40 1 11.2423 2.6509 -4.9845 41 1 12.4997 4.5280 -4.0059 42 1 11.3165 6.5723 -3.3090 43 1 8.8763 6.7391 -3.5913 44 1 4.0033 4.6661 -1.3796 45 1 3.2560 3.1746 -2.0993 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_16501620_2726874.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:43:59 Heat of formation + Delta-G solvation = -169.658173 kcal Electronic energy + Delta-G solvation = -33814.928259 eV Core-core repulsion = 29035.266833 eV Total energy + Delta-G solvation = -4779.661426 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.112 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -48.68754 -41.75747 -40.73358 -39.22970 -38.61077 -37.61328 -37.43693 -37.09450 -35.73647 -33.04150 -32.66727 -32.53604 -29.31819 -26.99850 -26.97316 -25.86939 -24.54220 -23.73866 -22.78578 -22.33312 -20.84357 -20.39587 -19.22453 -18.86824 -18.49194 -18.44203 -17.87825 -17.66228 -17.36047 -17.17247 -16.79061 -16.76165 -16.37016 -16.12298 -15.89503 -15.31104 -15.25102 -15.06067 -14.93986 -14.71150 -14.54208 -14.19195 -13.99174 -13.93450 -13.64350 -13.62469 -13.44702 -13.39163 -13.33807 -13.30427 -13.14283 -12.98398 -12.83730 -12.57243 -12.44806 -12.27627 -12.17087 -11.79022 -11.56355 -11.47415 -11.41318 -11.32556 -10.62520 -10.45869 -10.34427 -10.17689 -5.02841 -0.74799 -0.39867 -0.01046 1.10372 1.16836 1.56510 1.60817 1.82509 1.83909 2.23255 2.58063 3.04664 3.09620 3.13778 3.22799 3.37506 3.42055 3.57912 3.62777 3.72897 3.86681 3.88593 3.96753 4.04303 4.04422 4.14922 4.28689 4.31797 4.36820 4.39040 4.46628 4.55335 4.64500 4.66335 4.69410 4.75838 4.79036 4.87950 4.88860 4.92442 4.96588 5.03229 5.13322 5.14702 5.25888 5.45592 5.61856 6.02271 6.69546 6.73989 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.055 3.945 3 O -0.361 6.361 4 C 0.469 3.531 5 O -0.526 6.526 6 C -0.116 4.116 7 H 0.153 0.847 8 C -0.130 4.130 9 C 0.081 3.919 10 F -0.192 7.192 11 C 0.115 3.885 12 N -1.087 6.087 13 S 2.716 3.284 14 O -0.983 6.983 15 O -0.977 6.977 16 C -0.673 4.673 17 C 0.017 3.983 18 C -0.141 4.141 19 O -0.539 6.539 20 Si 0.783 3.217 21 C -0.167 4.167 22 C -0.059 4.059 23 C -0.135 4.135 24 C -0.030 4.030 25 C -0.131 4.131 26 H 0.069 0.931 27 H 0.068 0.932 28 H 0.095 0.905 29 H 0.065 0.935 30 H 0.067 0.933 31 H 0.079 0.921 32 H 0.152 0.848 33 H 0.118 0.882 34 H 0.080 0.920 35 H 0.427 0.573 36 H 0.107 0.893 37 H 0.403 0.597 38 H -0.292 1.292 39 H -0.277 1.277 40 H 0.130 0.870 41 H 0.160 0.840 42 H 0.166 0.834 43 H 0.160 0.840 44 H 0.149 0.851 45 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.745 0.306 3.052 3.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.018 4.018 3 O -0.278 6.278 4 C 0.313 3.687 5 O -0.415 6.415 6 C -0.135 4.135 7 H 0.170 0.830 8 C -0.168 4.168 9 C 0.061 3.939 10 F -0.173 7.173 11 C -0.012 4.012 12 N -0.850 5.850 13 S 2.806 3.194 14 O -0.973 6.973 15 O -0.967 6.967 16 C -0.760 4.760 17 C 0.015 3.985 18 C -0.250 4.250 19 O -0.348 6.348 20 Si 0.687 3.313 21 C -0.185 4.185 22 C -0.077 4.077 23 C -0.153 4.153 24 C -0.050 4.050 25 C -0.169 4.169 26 H 0.088 0.912 27 H 0.087 0.913 28 H 0.114 0.886 29 H 0.083 0.917 30 H 0.085 0.915 31 H 0.098 0.902 32 H 0.170 0.830 33 H 0.136 0.864 34 H 0.098 0.902 35 H 0.265 0.735 36 H 0.124 0.876 37 H 0.255 0.745 38 H -0.219 1.219 39 H -0.204 1.204 40 H 0.147 0.853 41 H 0.177 0.823 42 H 0.184 0.816 43 H 0.177 0.823 44 H 0.167 0.833 45 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.187 0.956 2.725 2.894 hybrid contribution 0.579 -0.767 0.085 0.964 sum 0.766 0.189 2.810 2.919 Atomic orbital electron populations 1.21825 0.90653 1.04241 1.03753 1.23221 0.96891 0.79361 1.02322 1.86495 1.24216 1.33409 1.83675 1.23682 0.80633 0.92796 0.71588 1.90688 1.61000 1.44052 1.45759 1.22188 0.97937 0.90284 1.03088 0.82978 1.23676 0.93156 1.06662 0.93304 1.22216 0.97654 0.79314 0.94762 1.92876 1.97333 1.39796 1.87246 1.21830 0.99551 1.01307 0.78481 1.54875 1.68576 1.45547 1.16021 1.01054 0.73241 0.72664 0.72474 1.93525 1.84605 1.83126 1.36046 1.93552 1.81706 1.41184 1.80299 1.30774 1.26969 1.02202 1.16065 1.19165 0.94035 0.92645 0.92621 1.25437 1.04931 0.98662 0.95978 1.86490 1.67242 1.48467 1.32625 0.93811 0.77488 0.83522 0.76479 1.21387 0.94025 1.00540 1.02546 1.21830 1.01812 0.91951 0.92082 1.21749 0.94276 0.99142 1.00169 1.21376 0.95529 0.96670 0.91381 1.23780 0.95192 1.04042 0.93865 0.91157 0.91281 0.88598 0.91690 0.91473 0.90228 0.82976 0.86427 0.90194 0.73524 0.87591 0.74531 1.21920 1.20383 0.85306 0.82274 0.81627 0.82291 0.83316 0.89867 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.45 10.29 71.99 0.74 1.19 16 2 C 0.06 0.10 6.19 71.99 0.45 0.55 16 3 O -0.36 -1.47 10.22 -51.38 -0.53 -2.00 16 4 C 0.47 2.21 6.93 71.24 0.49 2.71 16 5 O -0.53 -5.96 14.48 21.97 0.32 -5.64 16 6 C -0.12 0.41 4.46 -10.95 -0.05 0.36 16 7 H 0.15 -1.38 8.14 -2.38 -0.02 -1.40 16 8 C -0.13 0.59 6.92 31.12 0.22 0.80 16 9 C 0.08 -0.18 1.73 -10.27 -0.02 -0.19 16 10 F -0.19 -0.92 14.96 44.97 0.67 -0.25 16 11 C 0.11 -0.41 5.91 86.38 0.51 0.10 16 12 N -1.09 0.87 4.20 -187.49 -0.79 0.08 16 13 S 2.72 12.54 5.06 -56.49 -0.29 12.25 16 14 O -0.98 -9.54 15.54 -128.00 -1.99 -11.53 16 15 O -0.98 -7.65 16.45 -128.00 -2.11 -9.76 16 16 C -0.67 -3.08 5.86 22.27 0.13 -2.95 16 17 C 0.02 0.09 5.28 -19.86 -0.10 -0.02 16 18 C -0.14 -0.25 2.02 71.24 0.14 -0.11 16 19 O -0.54 0.69 10.59 -148.98 -1.58 -0.89 16 20 Si 0.78 -0.28 30.22 68.60 2.07 1.79 16 21 C -0.17 -0.69 8.66 22.27 0.19 -0.50 16 22 C -0.06 -0.01 10.05 22.27 0.22 0.21 16 23 C -0.13 0.14 10.05 22.27 0.22 0.36 16 24 C -0.03 -0.05 9.55 22.27 0.21 0.16 16 25 C -0.13 0.69 7.11 31.18 0.22 0.91 16 26 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 27 H 0.07 -0.21 8.14 -2.38 -0.02 -0.23 16 28 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 29 H 0.06 0.18 8.13 -2.39 -0.02 0.16 16 30 H 0.07 0.15 8.13 -2.39 -0.02 0.13 16 31 H 0.08 0.05 7.43 -2.39 -0.02 0.03 16 32 H 0.15 -1.80 8.10 -2.38 -0.02 -1.82 16 33 H 0.12 -0.90 7.56 -2.39 -0.02 -0.92 16 34 H 0.08 -0.26 8.14 -2.38 -0.02 -0.28 16 35 H 0.43 -0.97 7.72 -96.74 -0.75 -1.72 16 36 H 0.11 0.26 5.37 -2.39 -0.01 0.25 16 37 H 0.40 -3.77 8.74 -74.06 -0.65 -4.42 16 38 H -0.29 -1.72 7.11 99.48 0.71 -1.01 16 39 H -0.28 -1.13 6.73 99.48 0.67 -0.46 16 40 H 0.13 0.43 4.91 -2.91 -0.01 0.41 16 41 H 0.16 -0.88 8.06 -2.91 -0.02 -0.90 16 42 H 0.17 -1.19 8.06 -2.91 -0.02 -1.21 16 43 H 0.16 -0.19 7.34 -2.91 -0.02 -0.22 16 44 H 0.15 -1.60 7.97 -2.38 -0.02 -1.62 16 45 H 0.08 -0.26 8.10 -2.39 -0.02 -0.28 16 Total: 0.00 -27.72 382.91 -0.97 -28.69 By element: Atomic # 1 Polarization: -16.00 SS G_CDS: -0.34 Total: -16.34 kcal Atomic # 6 Polarization: 0.01 SS G_CDS: 3.58 Total: 3.59 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -0.79 Total: 0.08 kcal Atomic # 8 Polarization: -23.93 SS G_CDS: -5.88 Total: -29.81 kcal Atomic # 9 Polarization: -0.92 SS G_CDS: 0.67 Total: -0.25 kcal Atomic # 14 Polarization: -0.28 SS G_CDS: 2.07 Total: 1.79 kcal Atomic # 16 Polarization: 12.54 SS G_CDS: -0.29 Total: 12.25 kcal Total: -27.72 -0.97 -28.69 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16501620_2726874.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.971 kcal (2) G-P(sol) polarization free energy of solvation -27.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.966 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.687 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.658 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds