Wall clock time and date at job start Mon Mar 8 2021 10:55:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45199 * 109.47495 * 2 1 4 4 C 1.34229 * 117.00224 * 179.97438 * 3 2 1 5 5 O 1.20826 * 119.99910 * 0.02562 * 4 3 2 6 6 C 1.50699 * 119.99782 * 179.97438 * 4 3 2 7 7 H 1.08997 * 112.85422 * 48.80786 * 6 4 3 8 8 C 1.53786 * 113.61173 * 180.02562 * 6 4 3 9 9 C 1.53779 * 87.08383 * 140.06459 * 8 6 4 10 10 F 1.39901 * 113.61652 * 89.19636 * 9 8 6 11 11 C 1.52999 * 113.61630 * 220.01758 * 9 8 6 12 12 S 1.81402 * 109.47111 * 178.46738 * 11 9 8 13 13 O 1.42104 * 110.53885 * 68.37728 * 12 11 9 14 14 O 1.42092 * 110.54332 * 291.62450 * 12 11 9 15 15 O 1.52199 * 104.44542 * 179.97438 * 12 11 9 16 16 C 1.35896 * 114.00274 * 75.00475 * 15 12 11 17 17 C 1.38710 * 120.05428 * 89.99306 * 16 15 12 18 18 C 1.50699 * 120.03036 * 359.97438 * 17 16 15 19 19 O 1.42907 * 109.46603 * 74.72869 * 18 17 16 20 20 Si 1.86298 * 109.47032 * 194.72172 * 18 17 16 21 21 C 1.38169 * 119.93902 * 179.72374 * 17 16 15 22 22 C 1.38237 * 120.05945 * 0.28016 * 21 17 16 23 23 C 1.38286 * 120.11340 * 0.02562 * 22 21 17 24 24 N 1.48000 * 119.97530 * 179.97438 * 23 22 21 25 25 O 1.21796 * 120.00242 * 0.02562 * 24 23 22 26 26 O 1.21803 * 120.00167 * 180.02562 * 24 23 22 27 27 C 1.38126 * 120.05469 * 359.97438 * 23 22 21 28 28 C 1.53781 * 87.17102 * 334.60945 * 9 8 6 29 29 H 1.09001 * 109.46932 * 300.00539 * 1 2 3 30 30 H 1.09004 * 109.47182 * 59.99957 * 1 2 3 31 31 H 1.08999 * 109.47406 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.46932 * 239.99461 * 2 1 3 33 33 H 1.08998 * 109.46949 * 119.99706 * 2 1 3 34 34 H 1.08994 * 113.61426 * 25.51325 * 8 6 4 35 35 H 1.09005 * 113.68672 * 254.62845 * 8 6 4 36 36 H 1.08997 * 109.46846 * 58.46949 * 11 9 8 37 37 H 1.09001 * 109.47198 * 298.47213 * 11 9 8 38 38 H 1.08996 * 109.47117 * 314.72782 * 18 17 16 39 39 H 0.96697 * 114.00527 * 59.99993 * 19 18 17 40 40 H 1.48506 * 109.99834 * 58.68765 * 20 18 17 41 41 H 1.48502 * 110.00011 * 180.02562 * 20 18 17 42 42 H 1.08008 * 119.96791 * 180.29748 * 21 17 16 43 43 H 1.08001 * 119.94930 * 179.97438 * 22 21 17 44 44 H 1.08001 * 120.02935 * 179.97438 * 27 23 22 45 45 H 1.09004 * 113.61930 * 139.94158 * 28 9 8 46 46 H 1.08999 * 113.61253 * 270.84107 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.4710 3.5818 0.7552 8 6 5.4583 2.9680 0.0001 9 6 5.3567 4.1433 -0.9863 10 9 5.2853 5.3937 -0.3628 11 6 6.3990 4.0962 -2.1054 12 16 6.1495 5.5026 -3.2236 13 8 6.4718 6.7226 -2.5700 14 8 4.9339 5.3567 -3.9448 15 8 7.2343 5.3452 -4.2795 16 6 6.9879 4.3601 -5.1826 17 6 6.2911 4.6443 -6.3479 18 6 5.8060 6.0460 -6.6137 19 8 6.9114 6.8689 -6.9919 20 14 4.5524 6.0185 -7.9915 21 6 6.0469 3.6420 -7.2671 22 6 6.4911 2.3559 -7.0237 23 6 7.1804 2.0686 -5.8598 24 7 7.6542 0.6904 -5.6019 25 8 7.4373 -0.1903 -6.4149 26 8 8.2610 0.4367 -4.5767 27 6 7.4272 3.0669 -4.9376 28 6 3.9858 3.5807 -1.3972 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 0.5139 -0.8900 31 1 -0.3634 -1.0276 0.0005 32 1 1.8933 -0.5139 -0.8900 33 1 1.8933 -0.5138 0.8900 34 1 5.9128 2.0754 -0.4297 35 1 5.8908 3.2416 0.9625 36 1 6.2919 3.1656 -2.6626 37 1 7.3984 4.1482 -1.6735 38 1 5.3455 6.4483 -5.7114 39 1 7.3699 6.5697 -7.7890 40 1 3.4125 5.1406 -7.6236 41 1 4.0665 7.3951 -8.2638 42 1 5.5086 3.8639 -8.1769 43 1 6.2989 1.5737 -7.7432 44 1 7.9652 2.8420 -4.0286 45 1 3.2298 4.3488 -1.5608 46 1 4.0370 2.8560 -2.2097 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16525092_16464788.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:55:14 Heat of formation + Delta-G solvation = -190.893010 kcal Electronic energy + Delta-G solvation = -40832.000329 eV Core-core repulsion = 35122.682994 eV Total energy + Delta-G solvation = -5709.317335 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.095 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -49.35432 -43.61139 -42.84447 -41.89008 -40.08146 -39.51540 -38.67002 -38.16863 -37.79492 -37.55217 -37.52429 -34.03745 -32.99304 -32.57532 -32.12787 -29.19836 -27.55931 -27.13500 -26.14325 -25.48418 -24.09022 -23.70247 -22.65171 -22.15364 -21.06735 -20.73712 -20.08355 -19.62842 -19.30389 -18.99241 -18.86727 -18.76917 -18.53940 -17.94076 -17.73961 -17.66438 -17.38024 -17.02513 -16.68891 -16.39428 -16.35554 -16.21096 -15.88605 -15.54944 -15.42381 -14.88941 -14.83078 -14.77556 -14.60566 -14.45090 -14.22486 -13.99201 -13.92085 -13.87179 -13.63036 -13.56215 -13.47911 -13.27446 -13.13883 -13.07159 -12.80175 -12.72101 -12.64700 -12.61099 -12.41458 -12.31319 -12.28730 -12.10694 -11.72346 -11.62498 -11.50151 -11.20677 -10.94663 -10.88771 -5.35186 -1.76389 -1.59727 -0.84014 -0.15171 -0.10052 0.51516 0.86510 0.96924 1.38448 1.42269 1.44635 1.76829 2.02901 2.27765 2.41397 2.46989 2.59521 2.66667 2.67178 2.85495 2.93709 2.95148 2.97859 3.08636 3.22391 3.35795 3.51946 3.62880 3.76988 3.78952 3.86715 3.90557 4.00142 4.02265 4.07577 4.08534 4.11232 4.14486 4.20646 4.24863 4.35823 4.47890 4.61798 4.62799 4.72432 4.77889 4.94066 5.04595 5.32949 6.20607 6.34969 6.58232 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.354 6.354 4 C 0.474 3.526 5 O -0.500 6.500 6 C -0.108 4.108 7 H 0.139 0.861 8 C -0.120 4.120 9 C 0.103 3.897 10 F -0.169 7.169 11 C -0.674 4.674 12 S 2.586 3.414 13 O -0.890 6.890 14 O -0.940 6.940 15 O -0.643 6.643 16 C 0.093 3.907 17 C -0.040 4.040 18 C -0.099 4.099 19 O -0.522 6.522 20 Si 0.699 3.301 21 C -0.093 4.093 22 C -0.028 4.028 23 C -0.024 4.024 24 N 0.024 4.976 25 O -0.135 6.135 26 O -0.147 6.147 27 C -0.075 4.075 28 C -0.145 4.145 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.083 0.917 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.123 0.877 35 H 0.105 0.895 36 H 0.153 0.847 37 H 0.164 0.836 38 H 0.132 0.868 39 H 0.382 0.618 40 H -0.242 1.242 41 H -0.241 1.241 42 H 0.171 0.829 43 H 0.175 0.825 44 H 0.173 0.827 45 H 0.111 0.889 46 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.383 -2.135 -4.928 5.875 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.316 3.684 5 O -0.387 6.387 6 C -0.127 4.127 7 H 0.157 0.843 8 C -0.159 4.159 9 C 0.083 3.917 10 F -0.149 7.149 11 C -0.799 4.799 12 S 2.680 3.320 13 O -0.889 6.889 14 O -0.938 6.938 15 O -0.601 6.601 16 C 0.050 3.950 17 C -0.042 4.042 18 C -0.208 4.208 19 O -0.328 6.328 20 Si 0.597 3.403 21 C -0.111 4.111 22 C -0.048 4.048 23 C -0.106 4.106 24 N 0.547 4.453 25 O -0.354 6.354 26 O -0.364 6.364 27 C -0.096 4.096 28 C -0.183 4.183 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.101 0.899 32 H 0.090 0.910 33 H 0.091 0.909 34 H 0.141 0.859 35 H 0.123 0.877 36 H 0.171 0.829 37 H 0.182 0.818 38 H 0.149 0.851 39 H 0.230 0.770 40 H -0.166 1.166 41 H -0.165 1.165 42 H 0.188 0.812 43 H 0.193 0.807 44 H 0.191 0.809 45 H 0.130 0.870 46 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -3.513 -0.485 -4.966 6.102 hybrid contribution 0.709 -0.880 1.547 1.916 sum -2.804 -1.365 -3.420 4.628 Atomic orbital electron populations 1.21831 0.92158 1.03382 1.03752 1.23137 0.95755 0.79530 1.02897 1.86515 1.23959 1.33057 1.83501 1.23175 0.80956 0.91761 0.72466 1.90706 1.60516 1.42641 1.44840 1.22492 0.97192 0.92217 1.00829 0.84273 1.23597 0.93853 0.97540 1.00890 1.21176 0.95190 0.82464 0.92893 1.93027 1.96986 1.41406 1.83442 1.31372 1.10487 1.23806 1.14284 1.05929 0.73853 0.76841 0.75373 1.93730 1.82091 1.38471 1.74567 1.93641 1.45866 1.86856 1.67479 1.85856 1.67983 1.56904 1.49381 1.17348 1.02557 0.84145 0.90967 1.21155 0.92319 0.98872 0.91896 1.25680 0.97769 0.86652 1.10727 1.86665 1.45630 1.50952 1.49527 0.95453 0.78764 0.83772 0.82324 1.21077 0.99742 0.90549 0.99706 1.21344 0.90700 0.98502 0.94216 1.20781 1.07450 0.83253 0.99151 1.43409 0.99107 1.02319 1.00446 1.94606 1.59912 1.39164 1.41742 1.94613 1.38698 1.87472 1.15575 1.21132 0.97320 0.89922 1.01258 1.23819 0.95925 1.01808 0.96714 0.91274 0.91323 0.89867 0.91001 0.90888 0.85892 0.87689 0.82927 0.81835 0.85108 0.77033 1.16635 1.16487 0.81192 0.80717 0.80916 0.87035 0.86806 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.30 10.29 37.16 0.38 0.68 16 2 C 0.06 -0.01 6.19 37.16 0.23 0.22 16 3 O -0.35 -0.41 10.22 -39.26 -0.40 -0.81 16 4 C 0.47 0.59 7.49 36.01 0.27 0.86 16 5 O -0.50 -1.87 15.65 -18.75 -0.29 -2.16 16 6 C -0.11 0.12 4.24 -90.87 -0.38 -0.26 16 7 H 0.14 -0.36 8.14 -51.93 -0.42 -0.78 16 8 C -0.12 0.20 6.86 -25.92 -0.18 0.02 16 9 C 0.10 -0.09 1.60 -89.81 -0.14 -0.23 16 10 F -0.17 -0.26 16.35 2.25 0.04 -0.22 16 11 C -0.67 1.49 5.14 37.16 0.19 1.69 16 12 S 2.59 3.38 4.68 -107.50 -0.50 2.88 16 13 O -0.89 -4.67 17.56 -67.04 -1.18 -5.85 16 14 O -0.94 -1.72 14.24 -67.03 -0.95 -2.68 16 15 O -0.64 -0.45 9.48 -51.74 -0.49 -0.94 16 16 C 0.09 -0.08 4.79 -39.21 -0.19 -0.26 16 17 C -0.04 0.07 4.68 -104.47 -0.49 -0.42 16 18 C -0.10 0.07 2.24 36.01 0.08 0.15 16 19 O -0.52 0.37 12.88 -35.23 -0.45 -0.09 16 20 Si 0.70 -2.05 29.92 -169.99 -5.09 -7.13 16 21 C -0.09 0.44 8.66 -39.61 -0.34 0.10 16 22 C -0.03 0.12 9.55 -39.56 -0.38 -0.26 16 23 C -0.02 0.04 6.85 -79.98 -0.55 -0.51 16 24 N 0.02 0.02 4.45 33.95 0.15 0.17 16 25 O -0.13 -0.24 18.45 -29.46 -0.54 -0.78 16 26 O -0.15 -0.33 18.45 -29.46 -0.54 -0.87 16 27 C -0.08 0.16 7.96 -39.43 -0.31 -0.16 16 28 C -0.15 0.22 7.09 -25.83 -0.18 0.03 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 30 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 32 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 33 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 34 H 0.12 -0.22 7.39 -51.93 -0.38 -0.61 16 35 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 36 H 0.15 -0.73 6.41 -51.93 -0.33 -1.06 16 37 H 0.16 -0.76 8.14 -51.92 -0.42 -1.18 16 38 H 0.13 0.20 5.43 -51.93 -0.28 -0.08 16 39 H 0.38 -2.23 8.70 45.56 0.40 -1.83 16 40 H -0.24 0.24 7.11 56.52 0.40 0.64 16 41 H -0.24 -0.11 7.11 56.52 0.40 0.29 16 42 H 0.17 -1.40 5.13 -52.48 -0.27 -1.67 16 43 H 0.18 -1.11 7.61 -52.49 -0.40 -1.51 16 44 H 0.17 -0.70 7.01 -52.49 -0.37 -1.07 16 45 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 46 H 0.11 -0.30 7.94 -51.93 -0.41 -0.72 16 LS Contribution 409.03 15.07 6.16 6.16 Total: 0.00 -13.08 409.03 -11.14 -24.23 By element: Atomic # 1 Polarization: -8.51 SS G_CDS: -5.05 Total: -13.56 kcal Atomic # 6 Polarization: 3.64 SS G_CDS: -1.99 Total: 1.65 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: 0.15 Total: 0.17 kcal Atomic # 8 Polarization: -9.32 SS G_CDS: -4.86 Total: -14.18 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.04 Total: -0.22 kcal Atomic # 14 Polarization: -2.05 SS G_CDS: -5.09 Total: -7.13 kcal Atomic # 16 Polarization: 3.38 SS G_CDS: -0.50 Total: 2.88 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -13.08 -11.14 -24.23 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16525092_16464788.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.668 kcal (2) G-P(sol) polarization free energy of solvation -13.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.141 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.225 kcal (6) G-S(sol) free energy of system = (1) + (5) -190.893 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds