Wall clock time and date at job start Mon Mar 8 2021 10:33:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 H 1.00904 * 109.47690 * 2 1 4 4 C 1.46903 * 109.47060 * 120.00259 * 2 1 3 5 5 C 1.46900 * 109.46980 * 239.99810 * 2 1 3 6 6 C 1.53003 * 109.46946 * 65.00455 * 5 2 1 7 7 H 1.09004 * 112.85164 * 316.19196 * 6 5 2 8 8 C 1.53778 * 113.61726 * 87.50503 * 6 5 2 9 9 C 1.53778 * 87.08449 * 139.98071 * 8 6 5 10 10 H 1.09000 * 113.61263 * 89.11673 * 9 8 6 11 11 N 1.46502 * 113.61376 * 220.01807 * 9 8 6 12 12 S 1.65600 * 120.00088 * 242.49677 * 11 9 8 13 13 O 1.42092 * 106.40060 * 178.54069 * 12 11 9 14 14 O 1.42103 * 106.40022 * 311.45895 * 12 11 9 15 15 C 1.76196 * 107.21715 * 64.99807 * 12 11 9 16 16 C 1.38241 * 120.00269 * 269.72532 * 15 12 11 17 17 C 1.38231 * 119.99826 * 179.81008 * 16 15 12 18 18 C 1.38237 * 120.00418 * 0.39956 * 17 16 15 19 19 C 1.50692 * 120.00223 * 179.83097 * 18 17 16 20 20 O 1.42903 * 109.47353 * 245.02255 * 19 18 17 21 21 Si 1.86306 * 109.47241 * 5.02547 * 19 18 17 22 22 C 1.38237 * 119.99645 * 359.85453 * 18 17 16 23 23 C 1.38235 * 120.00089 * 359.96167 * 22 18 17 24 24 C 1.53784 * 87.08081 * 334.56700 * 9 8 6 25 25 H 1.09000 * 109.47096 * 59.99779 * 1 2 3 26 26 H 1.08999 * 109.47734 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.47083 * 300.00435 * 1 2 3 28 28 H 1.09001 * 109.47082 * 179.97438 * 4 2 1 29 29 H 1.08993 * 109.46939 * 299.99249 * 4 2 1 30 30 H 1.09002 * 109.46791 * 59.99734 * 4 2 1 31 31 H 1.08996 * 109.47281 * 305.00499 * 5 2 1 32 32 H 1.09005 * 109.47555 * 184.99998 * 5 2 1 33 33 H 1.08999 * 113.61111 * 254.53134 * 8 6 5 34 34 H 1.09004 * 113.61682 * 25.42530 * 8 6 5 35 35 H 0.96997 * 119.99802 * 62.49296 * 11 9 8 36 36 H 1.07998 * 119.99562 * 0.02562 * 16 15 12 37 37 H 1.08001 * 119.99848 * 180.22915 * 17 16 15 38 38 H 1.09004 * 109.47087 * 125.02524 * 19 18 17 39 39 H 0.96700 * 113.99779 * 60.00357 * 20 19 18 40 40 H 1.48498 * 109.99823 * 179.97438 * 21 19 18 41 41 H 1.48494 * 109.99777 * 301.31565 * 21 19 18 42 42 H 1.08000 * 119.99696 * 179.97438 * 22 18 17 43 43 H 1.07998 * 119.99734 * 180.02562 * 23 22 18 44 44 H 1.09004 * 113.61451 * 270.88641 * 24 9 8 45 45 H 1.08994 * 113.61477 * 139.97943 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9586 -0.6926 1.1994 5 6 1.9586 -0.6925 -1.1994 6 6 1.5539 0.0977 -2.4455 7 1 0.5237 0.4517 -2.4062 8 6 2.5664 1.1855 -2.8409 9 6 2.3145 0.7781 -4.3022 10 1 1.4928 1.3195 -4.7710 11 7 3.5274 0.7598 -5.1237 12 16 3.6652 1.7813 -6.4198 13 8 4.9500 1.5478 -6.9798 14 8 2.4595 1.6538 -7.1610 15 6 3.6891 3.4257 -5.7876 16 6 2.5060 4.1237 -5.6317 17 6 2.5246 5.4124 -5.1320 18 6 3.7268 6.0062 -4.7960 19 6 3.7473 7.4125 -4.2549 20 8 4.4230 8.2685 -5.1783 21 14 1.9994 8.0120 -4.0170 22 6 4.9103 5.3102 -4.9568 23 6 4.8914 4.0201 -5.4530 24 6 1.9135 -0.6059 -3.7649 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 3.0487 -0.6930 1.1992 29 1 1.5954 -0.1787 2.0894 30 1 1.5952 -1.7202 1.1993 31 1 1.5239 -1.6910 -1.2454 32 1 3.0450 -0.7708 -1.1559 33 1 2.2345 2.1969 -2.6062 34 1 3.5814 0.9821 -2.4996 35 1 4.2498 0.1494 -4.9084 36 1 1.5671 3.6607 -5.8971 37 1 1.6000 5.9563 -5.0068 38 1 4.2694 7.4261 -3.2981 39 1 4.0124 8.3054 -6.0531 40 1 2.0060 9.3976 -3.4831 41 1 1.2674 7.9682 -5.3083 42 1 5.8496 5.7743 -4.6947 43 1 5.8160 3.4762 -5.5782 44 1 2.7500 -1.2990 -3.6762 45 1 1.0546 -1.0406 -4.2760 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16607758_13421422.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:33:50 Heat of formation + Delta-G solvation = 84.274474 kcal Electronic energy + Delta-G solvation = -26689.760332 eV Core-core repulsion = 22921.535483 eV Total energy + Delta-G solvation = -3768.224849 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.142 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -44.52952 -41.71863 -41.59805 -39.21939 -38.69701 -37.83501 -35.91847 -33.97685 -33.18384 -32.10073 -31.93516 -28.77538 -28.16682 -28.04064 -25.67214 -25.05869 -23.94398 -22.87617 -21.98124 -21.56297 -20.38545 -20.21485 -19.69398 -19.59892 -19.12600 -18.57406 -18.09516 -17.83528 -17.43218 -17.09618 -16.94316 -16.77632 -16.50897 -16.34221 -16.10280 -15.92053 -15.81113 -15.76579 -15.50622 -15.40193 -15.30469 -15.21195 -14.97716 -14.67482 -14.57153 -14.07613 -14.01591 -13.72608 -13.64660 -13.57528 -13.40783 -13.28843 -12.78367 -12.61387 -11.91527 -11.60855 -11.38107 -11.12174 -5.93283 -1.74783 -1.52114 -1.33623 -0.79304 0.31330 0.42306 0.47617 0.66770 0.71224 0.80526 1.13354 1.23488 1.28656 1.37643 1.54870 1.62456 1.64139 1.74479 1.77644 1.84993 1.95703 2.06003 2.11748 2.18105 2.25681 2.27353 2.29517 2.39067 2.53046 2.63065 2.78367 2.81080 2.90250 2.94349 3.00907 3.13854 3.19322 3.30973 3.36595 3.47306 3.63603 3.71799 3.83947 3.95472 4.02303 4.30277 4.62445 4.71927 5.46793 Molecular weight = 328.14amu Principal moments of inertia in cm(-1) A = 0.010149 B = 0.004292 C = 0.003320 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2758.290860 B = 6521.923241 C = 8430.717745 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 N -0.387 5.387 3 H 0.427 0.573 4 C -0.048 4.048 5 C 0.002 3.998 6 C -0.150 4.150 7 H 0.120 0.880 8 C -0.163 4.163 9 C 0.131 3.869 10 H 0.126 0.874 11 N -1.105 6.105 12 S 2.690 3.310 13 O -0.947 6.947 14 O -0.948 6.948 15 C -0.675 4.675 16 C -0.019 4.019 17 C -0.139 4.139 18 C -0.057 4.057 19 C -0.085 4.085 20 O -0.522 6.522 21 Si 0.684 3.316 22 C -0.112 4.112 23 C -0.016 4.016 24 C -0.129 4.129 25 H 0.125 0.875 26 H 0.123 0.877 27 H 0.125 0.875 28 H 0.123 0.877 29 H 0.125 0.875 30 H 0.122 0.878 31 H 0.132 0.868 32 H 0.132 0.868 33 H 0.089 0.911 34 H 0.101 0.899 35 H 0.422 0.578 36 H 0.143 0.857 37 H 0.139 0.861 38 H 0.124 0.876 39 H 0.381 0.619 40 H -0.251 1.251 41 H -0.257 1.257 42 H 0.139 0.861 43 H 0.144 0.856 44 H 0.102 0.898 45 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.988 -15.208 24.587 30.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 N 0.038 4.962 3 H 0.262 0.738 4 C -0.190 4.190 5 C -0.120 4.120 6 C -0.169 4.169 7 H 0.138 0.862 8 C -0.203 4.203 9 C 0.023 3.977 10 H 0.144 0.856 11 N -0.863 5.863 12 S 2.780 3.220 13 O -0.937 6.937 14 O -0.938 6.938 15 C -0.762 4.762 16 C -0.038 4.038 17 C -0.158 4.158 18 C -0.058 4.058 19 C -0.194 4.194 20 O -0.329 6.329 21 Si 0.584 3.416 22 C -0.130 4.130 23 C -0.035 4.035 24 C -0.169 4.169 25 H 0.143 0.857 26 H 0.141 0.859 27 H 0.143 0.857 28 H 0.141 0.859 29 H 0.143 0.857 30 H 0.141 0.859 31 H 0.151 0.849 32 H 0.150 0.850 33 H 0.107 0.893 34 H 0.120 0.880 35 H 0.258 0.742 36 H 0.161 0.839 37 H 0.156 0.844 38 H 0.142 0.858 39 H 0.229 0.771 40 H -0.176 1.176 41 H -0.182 1.182 42 H 0.156 0.844 43 H 0.162 0.838 44 H 0.120 0.880 45 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -9.371 -14.900 23.933 29.708 hybrid contribution 0.990 0.940 -0.510 1.457 sum -8.381 -13.960 23.423 28.526 Atomic orbital electron populations 1.24203 0.75878 1.09782 1.09594 1.45036 1.16447 1.19075 1.15689 0.73814 1.24149 1.05665 1.02493 0.86673 1.24091 1.05063 0.99972 0.82874 1.23077 1.01897 0.98763 0.93131 0.86232 1.23878 0.99626 0.99172 0.97600 1.22165 0.87595 0.98050 0.89905 0.85644 1.55637 1.26077 1.54563 1.49984 1.02156 0.73900 0.73261 0.72720 1.93658 1.40846 1.84666 1.74514 1.93640 1.47479 1.85672 1.66961 1.30929 0.99794 1.25554 1.19956 1.20876 0.96727 0.94115 0.92131 1.21245 0.97771 0.95925 1.00841 1.20750 0.93747 0.96251 0.95065 1.25224 1.10908 0.87475 0.95823 1.86665 1.54194 1.66220 1.25807 0.95466 0.74874 0.84965 0.86251 1.21263 0.98555 0.94061 0.99169 1.21020 0.96457 0.95094 0.90973 1.23375 1.03642 0.97204 0.92637 0.85696 0.85857 0.85688 0.85853 0.85675 0.85921 0.84946 0.85010 0.89266 0.88049 0.74219 0.83895 0.84405 0.85799 0.77123 1.17597 1.18150 0.84354 0.83839 0.88002 0.88691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 25. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.73 8.97 60.06 0.54 2.26 16 2 N -0.39 13.14 0.66 -251.26 -0.17 12.98 16 3 H 0.43 -15.12 8.44 -39.29 -0.33 -15.45 16 4 C -0.05 1.57 9.19 60.07 0.55 2.12 16 5 C 0.00 -0.05 4.48 -3.82 -0.02 -0.07 16 6 C -0.15 4.20 3.58 -89.80 -0.32 3.88 16 7 H 0.12 -3.51 6.10 -51.93 -0.32 -3.83 16 8 C -0.16 4.12 7.43 -25.92 -0.19 3.93 16 9 C 0.13 -2.72 4.42 -67.12 -0.30 -3.02 16 10 H 0.13 -2.54 7.77 -51.93 -0.40 -2.95 16 11 N -1.11 19.07 5.79 -4.20 -0.02 19.05 16 12 S 2.69 -30.83 5.71 -107.50 -0.61 -31.45 16 13 O -0.95 6.76 17.28 -57.17 -0.99 5.77 16 14 O -0.95 7.70 16.80 -57.17 -0.96 6.74 16 15 C -0.68 8.11 5.95 -39.58 -0.24 7.88 16 16 C -0.02 0.25 9.52 -39.58 -0.38 -0.13 16 17 C -0.14 1.76 8.67 -39.58 -0.34 1.42 16 18 C -0.06 0.66 5.35 -104.63 -0.56 0.11 16 19 C -0.08 0.94 2.80 36.00 0.10 1.04 16 20 O -0.52 4.29 12.83 -35.23 -0.45 3.84 16 21 Si 0.68 -7.89 29.88 -169.99 -5.08 -12.97 16 22 C -0.11 1.24 9.69 -39.58 -0.38 0.85 16 23 C -0.02 0.18 9.52 -39.58 -0.38 -0.19 16 24 C -0.13 3.00 7.43 -25.91 -0.19 2.81 16 25 H 0.12 -4.06 6.10 -51.93 -0.32 -4.38 16 26 H 0.12 -3.96 8.11 -51.93 -0.42 -4.38 16 27 H 0.12 -4.07 8.14 -51.93 -0.42 -4.50 16 28 H 0.12 -4.01 8.11 -51.93 -0.42 -4.43 16 29 H 0.12 -4.07 8.14 -51.93 -0.42 -4.49 16 30 H 0.12 -3.94 8.14 -51.93 -0.42 -4.37 16 31 H 0.13 -4.17 8.09 -51.93 -0.42 -4.59 16 32 H 0.13 -4.19 7.79 -51.93 -0.40 -4.60 16 33 H 0.09 -2.27 8.14 -51.93 -0.42 -2.69 16 34 H 0.10 -2.60 7.90 -51.93 -0.41 -3.01 16 35 H 0.42 -7.96 8.94 -34.47 -0.31 -8.27 16 36 H 0.14 -2.08 7.61 -52.49 -0.40 -2.48 16 37 H 0.14 -1.95 4.85 -52.49 -0.25 -2.21 16 38 H 0.12 -1.53 7.96 -51.93 -0.41 -1.94 16 39 H 0.38 -4.04 8.70 45.56 0.40 -3.64 16 40 H -0.25 1.79 7.11 56.52 0.40 2.20 16 41 H -0.26 2.32 7.01 56.52 0.40 2.72 16 42 H 0.14 -1.57 8.06 -52.49 -0.42 -1.99 16 43 H 0.14 -1.74 7.62 -52.49 -0.40 -2.14 16 44 H 0.10 -2.39 8.10 -51.93 -0.42 -2.82 16 45 H 0.09 -2.08 8.14 -51.93 -0.42 -2.50 16 LS Contribution 371.03 15.07 5.59 5.59 Total: 1.00 -42.50 371.03 -11.78 -54.28 By element: Atomic # 1 Polarization: -79.74 SS G_CDS: -6.98 Total: -86.72 kcal Atomic # 6 Polarization: 24.99 SS G_CDS: -2.10 Total: 22.89 kcal Atomic # 7 Polarization: 32.21 SS G_CDS: -0.19 Total: 32.02 kcal Atomic # 8 Polarization: 18.74 SS G_CDS: -2.40 Total: 16.34 kcal Atomic # 14 Polarization: -7.89 SS G_CDS: -5.08 Total: -12.97 kcal Atomic # 16 Polarization: -30.83 SS G_CDS: -0.61 Total: -31.45 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -42.50 -11.78 -54.28 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16607758_13421422.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 138.559 kcal (2) G-P(sol) polarization free energy of solvation -42.504 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 96.056 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.285 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds