Wall clock time and date at job start Mon Mar 8 2021 10:33:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 H 1.00902 * 109.46901 * 2 1 4 4 C 1.46909 * 109.47166 * 119.99665 * 2 1 3 5 5 C 1.46894 * 109.47088 * 239.99662 * 2 1 3 6 6 C 1.53001 * 109.47096 * 174.99830 * 5 2 1 7 7 H 1.09000 * 112.85399 * 316.20237 * 6 5 2 8 8 C 1.53962 * 113.74125 * 87.40097 * 6 5 2 9 9 C 1.53786 * 87.01837 * 139.94572 * 8 6 5 10 10 H 1.09002 * 113.61587 * 89.23103 * 9 8 6 11 11 N 1.46498 * 113.61223 * 220.04986 * 9 8 6 12 12 S 1.65602 * 119.99612 * 243.85742 * 11 9 8 13 13 O 1.42104 * 106.40175 * 178.81816 * 12 11 9 14 14 O 1.42095 * 106.40656 * 311.73868 * 12 11 9 15 15 C 1.76203 * 107.21635 * 65.28001 * 12 11 9 16 16 C 1.33389 * 125.19928 * 90.00084 * 15 12 11 17 17 C 1.50699 * 122.54345 * 359.94813 * 16 15 12 18 18 O 1.42893 * 109.47532 * 285.00527 * 17 16 15 19 19 Si 1.86308 * 109.47002 * 165.00445 * 17 16 15 20 20 C 1.38433 * 114.91730 * 179.97438 * 16 15 12 21 21 C 1.33389 * 114.91849 * 359.97438 * 20 16 15 22 22 S 1.75879 * 125.20439 * 269.68817 * 15 12 11 23 23 C 1.53776 * 87.17168 * 334.64076 * 9 8 6 24 24 H 1.09006 * 109.47166 * 180.02562 * 1 2 3 25 25 H 1.09003 * 109.47369 * 300.00406 * 1 2 3 26 26 H 1.08999 * 109.47491 * 60.00511 * 1 2 3 27 27 H 1.08993 * 109.46935 * 59.99728 * 4 2 1 28 28 H 1.08994 * 109.46954 * 179.97438 * 4 2 1 29 29 H 1.09003 * 109.46918 * 300.00205 * 4 2 1 30 30 H 1.08996 * 109.47382 * 55.00057 * 5 2 1 31 31 H 1.08999 * 109.47285 * 294.99437 * 5 2 1 32 32 H 1.08996 * 113.61350 * 25.42747 * 8 6 5 33 33 H 1.08992 * 113.66987 * 254.47029 * 8 6 5 34 34 H 0.97001 * 120.00384 * 64.14220 * 11 9 8 35 35 H 1.08998 * 109.46945 * 45.00758 * 17 16 15 36 36 H 0.96703 * 114.00236 * 300.00406 * 18 17 16 37 37 H 1.48500 * 110.00006 * 180.02562 * 19 17 16 38 38 H 1.48502 * 109.99920 * 301.32134 * 19 17 16 39 39 H 1.07998 * 122.54095 * 179.97438 * 20 16 15 40 40 H 1.07999 * 125.19809 * 180.02562 * 21 20 16 41 41 H 1.09006 * 113.61692 * 139.93923 * 23 9 8 42 42 H 1.09006 * 113.61630 * 270.75324 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6925 1.1995 5 6 1.9586 -0.6925 -1.1993 6 6 3.4834 -0.5845 -1.2638 7 1 3.8473 0.4156 -1.0284 8 6 4.2168 -1.7014 -0.4988 9 6 5.2172 -1.7340 -1.6664 10 1 6.0556 -1.0486 -1.5423 11 7 5.6384 -3.0863 -2.0406 12 16 7.2228 -3.5369 -1.8700 13 8 7.3011 -4.8936 -2.2856 14 8 8.0000 -2.4996 -2.4524 15 6 7.5862 -3.5229 -0.1460 16 6 7.4401 -4.5608 0.6791 17 6 6.9313 -5.9008 0.2139 18 8 5.5209 -5.8259 -0.0028 19 14 7.2927 -7.1872 1.5122 20 6 7.7906 -4.3135 1.9953 21 6 8.2219 -3.0749 2.2388 22 16 8.2045 -2.1407 0.7487 23 6 4.0891 -1.1739 -2.5486 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8900 26 1 -0.3634 0.5137 -0.8900 27 1 1.5953 -1.7200 1.1996 28 1 3.0486 -0.6928 1.1993 29 1 1.5953 -0.1786 2.0895 30 1 1.5240 -0.2331 -2.0871 31 1 1.6703 -1.7428 -1.1556 32 1 3.6339 -2.6168 -0.3976 33 1 4.6555 -1.3715 0.4428 34 1 4.9901 -3.7164 -2.3922 35 1 7.4278 -6.1747 -0.7170 36 1 5.0141 -5.5862 0.7852 37 1 6.7964 -8.5135 1.0652 38 1 8.7538 -7.2525 1.7696 39 1 7.7203 -5.0662 2.7665 40 1 8.5375 -2.7039 3.2027 41 1 4.4246 -0.4186 -3.2594 42 1 3.4719 -1.9448 -3.0101 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16607758_13652106.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:33:53 Heat of formation + Delta-G solvation = 95.601398 kcal Electronic energy + Delta-G solvation = -26170.359719 eV Core-core repulsion = 22491.778288 eV Total energy + Delta-G solvation = -3678.581430 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.098 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -44.54635 -41.57264 -41.06434 -39.11034 -38.04017 -37.81974 -35.84961 -32.41358 -32.14087 -31.95610 -28.92332 -28.51979 -28.09806 -25.66132 -25.26990 -23.03988 -22.46242 -21.63748 -21.14023 -20.49468 -20.23235 -19.80861 -19.48649 -19.27876 -18.43660 -17.95104 -17.53727 -17.25630 -16.97285 -16.84360 -16.66489 -16.36392 -16.06279 -16.03789 -15.93471 -15.63755 -15.53694 -15.28395 -15.18330 -15.09425 -14.82536 -14.78446 -14.68892 -14.04595 -14.03678 -13.76740 -13.70661 -13.55666 -13.39372 -13.25130 -12.90237 -12.59231 -11.88187 -11.45469 -11.41760 -10.64361 -5.89318 -1.81153 -1.54981 -1.48468 -0.68349 -0.33900 0.23330 0.38595 0.45223 0.50115 0.67046 0.86640 0.91647 1.24623 1.25911 1.36032 1.55475 1.63129 1.69542 1.76146 1.79601 1.91825 1.97056 2.01884 2.16039 2.23373 2.27280 2.29090 2.44501 2.49783 2.56951 2.67762 2.91558 2.95869 3.02040 3.03769 3.11375 3.23155 3.34515 3.58408 3.74775 3.76286 3.95336 4.09260 4.72574 5.49266 Molecular weight = 334.10amu Principal moments of inertia in cm(-1) A = 0.012871 B = 0.004766 C = 0.004435 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2174.840292 B = 5873.171210 C = 6312.093446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.386 5.386 3 H 0.427 0.573 4 C -0.056 4.056 5 C 0.002 3.998 6 C -0.146 4.146 7 H 0.118 0.882 8 C -0.163 4.163 9 C 0.129 3.871 10 H 0.122 0.878 11 N -1.096 6.096 12 S 2.715 3.285 13 O -0.936 6.936 14 O -0.948 6.948 15 C -0.782 4.782 16 C 0.015 3.985 17 C -0.089 4.089 18 O -0.526 6.526 19 Si 0.688 3.312 20 C -0.162 4.162 21 C -0.159 4.159 22 S 0.218 5.782 23 C -0.127 4.127 24 H 0.122 0.878 25 H 0.124 0.876 26 H 0.123 0.877 27 H 0.122 0.878 28 H 0.127 0.873 29 H 0.123 0.877 30 H 0.134 0.866 31 H 0.132 0.868 32 H 0.105 0.895 33 H 0.087 0.913 34 H 0.426 0.574 35 H 0.153 0.847 36 H 0.373 0.627 37 H -0.245 1.245 38 H -0.252 1.252 39 H 0.159 0.841 40 H 0.181 0.819 41 H 0.094 0.906 42 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -23.708 15.833 7.512 29.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.038 4.962 3 H 0.262 0.738 4 C -0.198 4.198 5 C -0.120 4.120 6 C -0.165 4.165 7 H 0.136 0.864 8 C -0.203 4.203 9 C 0.021 3.979 10 H 0.140 0.860 11 N -0.854 5.854 12 S 2.801 3.199 13 O -0.926 6.926 14 O -0.938 6.938 15 C -0.983 4.983 16 C -0.004 4.004 17 C -0.202 4.202 18 O -0.330 6.330 19 Si 0.588 3.412 20 C -0.192 4.192 21 C -0.296 4.296 22 S 0.485 5.515 23 C -0.167 4.167 24 H 0.140 0.860 25 H 0.143 0.857 26 H 0.142 0.858 27 H 0.141 0.859 28 H 0.145 0.855 29 H 0.141 0.859 30 H 0.152 0.848 31 H 0.150 0.850 32 H 0.123 0.877 33 H 0.106 0.894 34 H 0.262 0.738 35 H 0.170 0.830 36 H 0.219 0.781 37 H -0.170 1.170 38 H -0.176 1.176 39 H 0.176 0.824 40 H 0.198 0.802 41 H 0.113 0.887 42 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -22.061 16.087 6.136 27.985 hybrid contribution -0.292 -0.984 0.625 1.202 sum -22.354 15.104 6.761 27.812 Atomic orbital electron populations 1.24141 0.75612 1.09632 1.09604 1.45087 1.16227 1.18923 1.15917 0.73795 1.24317 1.06308 1.02438 0.86725 1.24087 0.98066 1.02555 0.87261 1.23015 0.90153 1.01644 1.01700 0.86389 1.24014 0.98750 0.98447 0.99052 1.22171 0.97175 0.83756 0.94805 0.85989 1.55498 1.29859 1.20315 1.79738 1.01453 0.72514 0.73703 0.72209 1.93600 1.85139 1.34200 1.79693 1.93652 1.67633 1.58608 1.73879 1.35703 1.26056 1.06095 1.30446 1.19238 0.93383 0.95371 0.92373 1.25543 0.85089 0.98077 1.11473 1.86597 1.15116 1.92671 1.38614 0.95437 0.83913 0.78711 0.83154 1.20325 1.04613 0.97818 0.96438 1.26289 1.02260 0.98069 1.03023 1.84346 1.60072 1.09785 0.97293 1.23347 0.96649 1.01322 0.95427 0.85980 0.85735 0.85816 0.85943 0.85510 0.85867 0.84841 0.85015 0.87682 0.89408 0.73813 0.82979 0.78097 1.16963 1.17627 0.82371 0.80172 0.88699 0.87897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.56 9.19 60.06 0.55 2.12 16 2 N -0.39 13.00 0.66 -251.26 -0.17 12.83 16 3 H 0.43 -15.09 8.41 -39.29 -0.33 -15.42 16 4 C -0.06 1.81 8.57 60.07 0.52 2.32 16 5 C 0.00 -0.06 4.57 -3.83 -0.02 -0.07 16 6 C -0.15 4.00 3.30 -89.71 -0.30 3.71 16 7 H 0.12 -3.37 8.09 -51.93 -0.42 -3.79 16 8 C -0.16 4.05 5.70 -25.82 -0.15 3.90 16 9 C 0.13 -2.53 4.42 -67.12 -0.30 -2.83 16 10 H 0.12 -2.25 7.75 -51.93 -0.40 -2.65 16 11 N -1.10 17.28 5.79 -4.20 -0.02 17.26 16 12 S 2.72 -26.57 5.73 -107.50 -0.62 -27.19 16 13 O -0.94 5.66 14.92 -57.17 -0.85 4.81 16 14 O -0.95 6.08 17.41 -57.17 -1.00 5.09 16 15 C -0.78 8.73 6.55 29.04 0.19 8.92 16 16 C 0.01 -0.17 5.13 -106.25 -0.55 -0.71 16 17 C -0.09 0.94 1.97 36.01 0.07 1.01 16 18 O -0.53 6.81 12.88 -35.23 -0.45 6.36 16 19 Si 0.69 -7.21 30.25 -169.99 -5.14 -12.35 16 20 C -0.16 2.12 8.74 -41.20 -0.36 1.75 16 21 C -0.16 2.15 11.23 29.04 0.33 2.48 16 22 S 0.22 -2.74 23.21 -107.50 -2.50 -5.23 16 23 C -0.13 2.86 7.42 -25.92 -0.19 2.67 16 24 H 0.12 -3.90 8.14 -51.93 -0.42 -4.32 16 25 H 0.12 -4.02 8.14 -51.93 -0.42 -4.44 16 26 H 0.12 -3.98 8.11 -51.93 -0.42 -4.40 16 27 H 0.12 -3.92 8.11 -51.93 -0.42 -4.34 16 28 H 0.13 -4.01 5.13 -51.93 -0.27 -4.27 16 29 H 0.12 -3.98 8.14 -51.93 -0.42 -4.40 16 30 H 0.13 -4.19 8.09 -51.93 -0.42 -4.61 16 31 H 0.13 -4.11 7.80 -51.93 -0.41 -4.52 16 32 H 0.10 -2.68 7.91 -51.93 -0.41 -3.09 16 33 H 0.09 -2.22 7.19 -51.93 -0.37 -2.59 16 34 H 0.43 -7.27 8.93 -34.47 -0.31 -7.58 16 35 H 0.15 -1.14 5.65 -51.93 -0.29 -1.43 16 36 H 0.37 -6.73 8.70 45.56 0.40 -6.33 16 37 H -0.25 1.62 7.11 56.52 0.40 2.02 16 38 H -0.25 1.79 7.11 56.52 0.40 2.19 16 39 H 0.16 -2.38 5.73 -52.49 -0.30 -2.68 16 40 H 0.18 -2.85 8.06 -52.49 -0.42 -3.27 16 41 H 0.09 -1.99 8.14 -51.93 -0.42 -2.41 16 42 H 0.10 -2.34 8.10 -51.93 -0.42 -2.76 16 LS Contribution 356.21 15.07 5.37 5.37 Total: 1.00 -41.21 356.21 -11.69 -52.90 By element: Atomic # 1 Polarization: -79.00 SS G_CDS: -6.11 Total: -85.11 kcal Atomic # 6 Polarization: 25.47 SS G_CDS: -0.20 Total: 25.27 kcal Atomic # 7 Polarization: 30.28 SS G_CDS: -0.19 Total: 30.09 kcal Atomic # 8 Polarization: 18.56 SS G_CDS: -2.30 Total: 16.26 kcal Atomic # 14 Polarization: -7.21 SS G_CDS: -5.14 Total: -12.35 kcal Atomic # 16 Polarization: -29.31 SS G_CDS: -3.11 Total: -32.42 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -41.21 -11.69 -52.90 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16607758_13652106.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 148.499 kcal (2) G-P(sol) polarization free energy of solvation -41.210 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 107.289 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.688 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -52.898 kcal (6) G-S(sol) free energy of system = (1) + (5) 95.601 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds