Wall clock time and date at job start Mon Mar 8 2021 10:34:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.33390 * 125.20083 * 2 1 4 4 C 1.50709 * 122.53976 * 0.02668 * 3 2 1 5 5 O 1.42896 * 109.46833 * 315.09129 * 4 3 2 6 6 Si 1.86300 * 109.46802 * 75.08968 * 4 3 2 7 7 C 1.38427 * 114.92245 * 179.75582 * 3 2 1 8 8 S 1.76194 * 122.54022 * 180.27027 * 7 3 2 9 9 O 1.42105 * 106.40701 * 23.21483 * 8 7 3 10 10 O 1.42102 * 106.40576 * 156.13720 * 8 7 3 11 11 N 1.65601 * 107.21833 * 269.67676 * 8 7 3 12 12 C 1.46502 * 120.00151 * 66.42629 * 11 8 7 13 13 H 1.08997 * 112.84692 * 12.74219 * 12 11 8 14 14 C 1.53776 * 113.61463 * 143.94839 * 12 11 8 15 15 C 1.53783 * 87.08239 * 139.97978 * 14 12 11 16 16 H 1.09003 * 113.61434 * 89.11154 * 15 14 12 17 17 C 1.53002 * 113.61148 * 219.93163 * 15 14 12 18 18 N 1.46904 * 109.46872 * 184.99796 * 17 15 14 19 19 H 1.00902 * 109.47329 * 55.00044 * 18 17 15 20 20 C 1.46896 * 109.46828 * 175.00092 * 18 17 15 21 21 C 1.46902 * 109.46966 * 295.00386 * 18 17 15 22 22 C 1.53783 * 87.07890 * 334.56541 * 15 14 12 23 23 C 1.33388 * 114.91690 * 0.24977 * 7 3 2 24 24 C 1.50698 * 125.19770 * 179.97438 * 23 7 3 25 25 S 1.75877 * 109.59743 * 359.97438 * 23 7 3 26 26 H 1.09003 * 109.47588 * 90.94599 * 1 2 3 27 27 H 1.09009 * 109.47253 * 210.93997 * 1 2 3 28 28 H 1.08994 * 109.47715 * 330.94510 * 1 2 3 29 29 H 1.08992 * 109.47150 * 195.09175 * 4 3 2 30 30 H 0.96700 * 113.99687 * 179.97438 * 5 4 3 31 31 H 1.48492 * 110.00280 * 305.16891 * 6 4 3 32 32 H 1.48500 * 109.99910 * 66.49601 * 6 4 3 33 33 H 0.97001 * 119.99826 * 246.42292 * 11 8 7 34 34 H 1.09007 * 113.61257 * 254.52542 * 14 12 11 35 35 H 1.09001 * 113.61851 * 25.34352 * 14 12 11 36 36 H 1.08991 * 109.47176 * 304.99778 * 17 15 14 37 37 H 1.08993 * 109.47077 * 64.99886 * 17 15 14 38 38 H 1.09001 * 109.47078 * 60.00133 * 20 18 17 39 39 H 1.09004 * 109.47138 * 179.97438 * 20 18 17 40 40 H 1.08992 * 109.47347 * 299.99578 * 20 18 17 41 41 H 1.09002 * 109.46704 * 299.99580 * 21 18 17 42 42 H 1.08995 * 109.47667 * 59.99836 * 21 18 17 43 43 H 1.09004 * 109.46972 * 180.02562 * 21 18 17 44 44 H 1.09003 * 113.61146 * 270.88493 * 22 15 14 45 45 H 1.09002 * 113.61477 * 139.98354 * 22 15 14 46 46 H 1.08999 * 109.47895 * 84.31058 * 24 23 7 47 47 H 1.09007 * 109.46931 * 204.31194 * 24 23 7 48 48 H 1.09005 * 109.47505 * 324.30307 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2759 1.0900 0.0000 4 6 1.7050 2.4848 0.0006 5 8 0.6411 2.5643 -0.9501 6 14 1.0521 2.8877 1.6983 7 6 3.6379 0.8430 0.0054 8 16 4.8354 2.1354 0.0134 9 8 4.1870 3.2801 0.5504 10 8 6.0202 1.5813 0.5687 11 7 5.1820 2.4923 -1.5662 12 6 4.1542 3.0849 -2.4258 13 1 3.2901 3.4435 -1.8666 14 6 4.7070 4.1098 -3.4301 15 6 3.7303 3.5128 -4.4570 16 1 2.7494 3.9881 -4.4542 17 6 4.3228 3.3810 -5.8616 18 7 3.2831 2.9171 -6.7899 19 1 2.4898 3.5390 -6.7446 20 6 3.8182 2.9050 -8.1579 21 6 2.8632 1.5599 -6.4162 22 6 3.7872 2.2125 -3.6379 23 6 3.9750 -0.4476 0.0044 24 6 5.3860 -0.9768 0.0089 25 16 2.5210 -1.4371 -0.0028 26 1 -0.3634 -0.0170 -1.0275 27 1 -0.3634 -0.8815 0.5284 28 1 -0.3634 0.8983 0.4990 29 1 2.4855 3.1969 -0.2671 30 1 0.2257 3.4359 -1.0033 31 1 0.0773 1.8527 2.1265 32 1 2.1734 2.9622 2.6691 33 1 6.0655 2.3092 -1.9222 34 1 4.4847 5.1437 -3.1659 35 1 5.7562 3.9533 -3.6810 36 1 4.6972 4.3504 -6.1903 37 1 5.1417 2.6620 -5.8444 38 1 4.6752 2.2331 -8.2068 39 1 3.0470 2.5603 -8.8467 40 1 4.1297 3.9120 -8.4351 41 1 3.7201 0.8881 -6.4653 42 1 2.4661 1.5689 -5.4012 43 1 2.0920 1.2155 -7.1054 44 1 4.5845 1.5364 -3.9468 45 1 2.8223 1.7147 -3.5415 46 1 5.7582 -1.0108 1.0328 47 1 5.3989 -1.9806 -0.4159 48 1 6.0217 -0.3219 -0.5872 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16607758_15065288.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:34:04 Heat of formation + Delta-G solvation = 92.703862 kcal Electronic energy + Delta-G solvation = -31031.726385 eV Core-core repulsion = 27041.944070 eV Total energy + Delta-G solvation = -3989.782315 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.129 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -44.53999 -41.64915 -41.07858 -39.46782 -38.17023 -37.90695 -35.92763 -35.11635 -32.14313 -31.95463 -31.78153 -29.02153 -28.53042 -28.08801 -26.79529 -25.67235 -24.05778 -23.00781 -21.92694 -21.42436 -20.91016 -20.26368 -20.15706 -19.82759 -19.55682 -18.81972 -18.61305 -18.07524 -17.93785 -17.16224 -16.98738 -16.82713 -16.42703 -16.34946 -16.07838 -16.03607 -15.90942 -15.61868 -15.55646 -15.36282 -15.29276 -15.17847 -15.14186 -15.09002 -14.86698 -14.74274 -14.50161 -14.27781 -14.12585 -13.94359 -13.75144 -13.73455 -13.56703 -13.46736 -13.26830 -12.93533 -12.61647 -12.22395 -11.89282 -11.48258 -10.90366 -10.27062 -5.75138 -1.79464 -1.47690 -1.33606 -0.53555 -0.17197 -0.09747 0.46189 0.51374 0.63467 0.69197 0.95524 0.99161 1.27727 1.36854 1.37426 1.55948 1.64062 1.67679 1.76371 1.82306 1.92529 1.97781 2.03017 2.15974 2.16909 2.23448 2.27438 2.28340 2.32521 2.62442 2.72523 2.86705 2.91458 2.98753 3.02771 3.15486 3.16726 3.25767 3.32699 3.33565 3.53747 3.62471 3.73701 3.79610 3.80555 3.99126 4.15200 4.20093 4.37158 4.60970 5.59062 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.010164 B = 0.004453 C = 0.004275 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2754.196655 B = 6286.508577 C = 6548.027858 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 C -0.163 4.163 3 C -0.043 4.043 4 C -0.069 4.069 5 O -0.547 6.547 6 Si 0.686 3.314 7 C -0.690 4.690 8 S 2.700 3.300 9 O -0.942 6.942 10 O -0.943 6.943 11 N -1.104 6.104 12 C 0.130 3.870 13 H 0.128 0.872 14 C -0.129 4.129 15 C -0.144 4.144 16 H 0.120 0.880 17 C 0.002 3.998 18 N -0.386 5.386 19 H 0.427 0.573 20 C -0.048 4.048 21 C -0.056 4.056 22 C -0.163 4.163 23 C -0.050 4.050 24 C -0.110 4.110 25 S 0.166 5.834 26 H 0.083 0.917 27 H 0.066 0.934 28 H 0.087 0.913 29 H 0.100 0.900 30 H 0.384 0.616 31 H -0.249 1.249 32 H -0.251 1.251 33 H 0.421 0.579 34 H 0.095 0.905 35 H 0.101 0.899 36 H 0.134 0.866 37 H 0.130 0.870 38 H 0.121 0.879 39 H 0.124 0.876 40 H 0.124 0.876 41 H 0.121 0.879 42 H 0.128 0.872 43 H 0.123 0.877 44 H 0.099 0.901 45 H 0.091 0.909 46 H 0.105 0.895 47 H 0.084 0.916 48 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.079 5.829 -28.131 28.749 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.281 4.281 3 C -0.053 4.053 4 C -0.181 4.181 5 O -0.354 6.354 6 Si 0.585 3.415 7 C -0.790 4.790 8 S 2.788 3.212 9 O -0.932 6.932 10 O -0.933 6.933 11 N -0.861 5.861 12 C 0.022 3.978 13 H 0.145 0.855 14 C -0.169 4.169 15 C -0.164 4.164 16 H 0.138 0.862 17 C -0.120 4.120 18 N 0.039 4.961 19 H 0.262 0.738 20 C -0.190 4.190 21 C -0.198 4.198 22 C -0.202 4.202 23 C -0.171 4.171 24 C -0.169 4.169 25 S 0.432 5.568 26 H 0.102 0.898 27 H 0.085 0.915 28 H 0.105 0.895 29 H 0.117 0.883 30 H 0.232 0.768 31 H -0.174 1.174 32 H -0.174 1.174 33 H 0.257 0.743 34 H 0.114 0.886 35 H 0.120 0.880 36 H 0.152 0.848 37 H 0.148 0.852 38 H 0.139 0.861 39 H 0.143 0.857 40 H 0.142 0.858 41 H 0.139 0.861 42 H 0.146 0.854 43 H 0.142 0.858 44 H 0.118 0.882 45 H 0.109 0.891 46 H 0.123 0.877 47 H 0.102 0.898 48 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -0.887 3.581 -26.569 26.824 hybrid contribution 0.354 0.611 -0.649 0.959 sum -0.534 4.193 -27.218 27.544 Atomic orbital electron populations 1.20491 0.86523 1.03633 1.03521 1.24516 1.00836 0.94636 1.08086 1.17492 0.89709 0.94757 1.03355 1.24873 0.93511 0.94407 1.05295 1.86412 1.50170 1.37731 1.61044 0.95531 0.83011 0.87628 0.75337 1.29345 1.11399 1.13412 1.24807 1.01853 0.73281 0.73668 0.72385 1.93535 1.76106 1.47782 1.75787 1.93651 1.45222 1.79434 1.75002 1.55623 1.21475 1.77499 1.31541 1.22284 0.91572 0.93620 0.90346 0.85455 1.23379 0.99479 1.00933 0.93091 1.22978 1.02122 1.00838 0.90435 0.86217 1.24087 0.91387 1.06216 0.90302 1.45081 1.18017 1.17330 1.15675 0.73761 1.24139 1.05380 1.09565 0.79908 1.24325 1.06645 0.80929 1.07931 1.23936 1.04098 0.95892 0.96276 1.24594 1.00987 0.94966 0.96554 1.20888 0.87852 1.02196 1.05922 1.84660 0.94916 1.08358 1.68854 0.89811 0.91471 0.89452 0.88278 0.76782 1.17437 1.17447 0.74311 0.88618 0.88046 0.84800 0.85182 0.86051 0.85718 0.85785 0.86078 0.85395 0.85827 0.88245 0.89053 0.87667 0.89768 0.89095 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.80 9.04 36.00 0.33 1.13 16 2 C -0.16 1.45 6.16 -36.01 -0.22 1.23 16 3 C -0.04 0.41 4.23 -106.24 -0.45 -0.04 16 4 C -0.07 0.77 2.06 36.01 0.07 0.84 16 5 O -0.55 7.76 11.06 -35.23 -0.39 7.37 16 6 Si 0.69 -5.76 30.48 -169.99 -5.18 -10.94 16 7 C -0.69 6.63 5.88 -41.21 -0.24 6.39 16 8 S 2.70 -27.19 5.29 -107.50 -0.57 -27.76 16 9 O -0.94 7.27 13.55 -57.17 -0.77 6.49 16 10 O -0.94 6.52 15.24 -57.17 -0.87 5.65 16 11 N -1.10 17.84 5.78 -4.20 -0.02 17.82 16 12 C 0.13 -2.52 4.44 -67.12 -0.30 -2.82 16 13 H 0.13 -2.34 5.55 -51.93 -0.29 -2.62 16 14 C -0.13 2.91 7.43 -25.92 -0.19 2.72 16 15 C -0.14 3.91 3.30 -89.80 -0.30 3.61 16 16 H 0.12 -3.38 8.10 -51.93 -0.42 -3.80 16 17 C 0.00 -0.05 4.57 -3.82 -0.02 -0.07 16 18 N -0.39 12.76 0.66 -251.27 -0.17 12.60 16 19 H 0.43 -14.88 8.41 -39.29 -0.33 -15.21 16 20 C -0.05 1.54 9.19 60.06 0.55 2.10 16 21 C -0.06 1.76 8.57 60.07 0.51 2.28 16 22 C -0.16 3.86 5.69 -25.92 -0.15 3.72 16 23 C -0.05 0.48 6.49 -36.00 -0.23 0.25 16 24 C -0.11 1.20 8.86 36.00 0.32 1.52 16 25 S 0.17 -1.57 23.31 -107.50 -2.51 -4.07 16 26 H 0.08 -0.93 8.14 -51.93 -0.42 -1.35 16 27 H 0.07 -0.62 8.14 -51.92 -0.42 -1.05 16 28 H 0.09 -0.79 4.51 -51.93 -0.23 -1.03 16 29 H 0.10 -1.23 2.85 -51.93 -0.15 -1.38 16 30 H 0.38 -7.08 8.74 45.56 0.40 -6.68 16 31 H -0.25 1.53 6.20 56.52 0.35 1.88 16 32 H -0.25 0.98 7.11 56.52 0.40 1.38 16 33 H 0.42 -7.67 8.95 -34.47 -0.31 -7.98 16 34 H 0.10 -2.05 8.14 -51.92 -0.42 -2.47 16 35 H 0.10 -2.33 8.10 -51.93 -0.42 -2.75 16 36 H 0.13 -4.19 8.09 -51.93 -0.42 -4.61 16 37 H 0.13 -4.01 7.79 -51.93 -0.40 -4.41 16 38 H 0.12 -3.82 8.14 -51.93 -0.42 -4.25 16 39 H 0.12 -3.97 8.14 -51.93 -0.42 -4.39 16 40 H 0.12 -3.96 8.11 -51.93 -0.42 -4.38 16 41 H 0.12 -3.74 8.11 -51.93 -0.42 -4.16 16 42 H 0.13 -3.85 5.13 -51.93 -0.27 -4.12 16 43 H 0.12 -3.86 8.14 -51.93 -0.42 -4.29 16 44 H 0.10 -2.44 7.90 -51.93 -0.41 -2.85 16 45 H 0.09 -2.11 7.19 -51.93 -0.37 -2.48 16 46 H 0.11 -1.01 8.14 -51.93 -0.42 -1.44 16 47 H 0.08 -1.05 8.14 -51.92 -0.42 -1.47 16 48 H 0.09 -1.11 6.70 -51.93 -0.35 -1.46 16 LS Contribution 383.96 15.07 5.79 5.79 Total: 1.00 -39.10 383.96 -12.46 -51.56 By element: Atomic # 1 Polarization: -79.91 SS G_CDS: -7.45 Total: -87.36 kcal Atomic # 6 Polarization: 23.17 SS G_CDS: -0.31 Total: 22.86 kcal Atomic # 7 Polarization: 30.61 SS G_CDS: -0.19 Total: 30.42 kcal Atomic # 8 Polarization: 21.54 SS G_CDS: -2.04 Total: 19.51 kcal Atomic # 14 Polarization: -5.76 SS G_CDS: -5.18 Total: -10.94 kcal Atomic # 16 Polarization: -28.76 SS G_CDS: -3.07 Total: -31.83 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -39.10 -12.46 -51.56 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16607758_15065288.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 144.262 kcal (2) G-P(sol) polarization free energy of solvation -39.103 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 105.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.558 kcal (6) G-S(sol) free energy of system = (1) + (5) 92.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds