Wall clock time and date at job start Mon Mar 8 2021 10:34:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46907 * 1 3 3 H 1.00895 * 109.47296 * 2 1 4 4 C 1.46905 * 109.47008 * 120.00634 * 2 1 3 5 5 C 1.46896 * 109.46583 * 240.00282 * 2 1 3 6 6 C 1.53001 * 109.47327 * 65.00104 * 5 2 1 7 7 H 1.09000 * 112.90589 * 43.74212 * 6 5 2 8 8 C 1.53782 * 113.61516 * 174.99714 * 6 5 2 9 9 C 1.53787 * 87.08084 * 139.98306 * 8 6 5 10 10 H 1.08993 * 113.61504 * 89.19516 * 9 8 6 11 11 N 1.46499 * 113.61369 * 220.02172 * 9 8 6 12 12 S 1.65596 * 119.99758 * 214.75395 * 11 9 8 13 13 O 1.42102 * 106.40303 * 311.60496 * 12 11 9 14 14 O 1.42109 * 106.40058 * 178.68764 * 12 11 9 15 15 C 1.76197 * 107.22084 * 65.14775 * 12 11 9 16 16 C 1.38212 * 119.99859 * 64.23834 * 15 12 11 17 17 C 1.50696 * 120.00305 * 359.97438 * 16 15 12 18 18 O 1.42904 * 109.47214 * 284.36548 * 17 16 15 19 19 Si 1.86297 * 109.47219 * 164.36431 * 17 16 15 20 20 C 1.38255 * 119.99726 * 180.02562 * 16 15 12 21 21 C 1.38217 * 120.00416 * 359.95592 * 20 16 15 22 22 C 1.38262 * 119.99348 * 359.97438 * 21 20 16 23 23 C 1.38202 * 120.00177 * 0.09603 * 22 21 20 24 24 C 1.53784 * 113.61383 * 272.49763 * 6 5 2 25 25 H 1.08994 * 109.47147 * 180.02562 * 1 2 3 26 26 H 1.09008 * 109.46664 * 299.99780 * 1 2 3 27 27 H 1.08999 * 109.47019 * 59.99341 * 1 2 3 28 28 H 1.09000 * 109.46350 * 179.97438 * 4 2 1 29 29 H 1.08999 * 109.46949 * 299.99350 * 4 2 1 30 30 H 1.08995 * 109.47049 * 59.99678 * 4 2 1 31 31 H 1.09002 * 109.47767 * 304.99984 * 5 2 1 32 32 H 1.09003 * 109.47207 * 184.99608 * 5 2 1 33 33 H 1.08995 * 113.61499 * 25.43607 * 8 6 5 34 34 H 1.09005 * 113.69001 * 254.53881 * 8 6 5 35 35 H 0.97001 * 120.00032 * 34.74843 * 11 9 8 36 36 H 1.08999 * 109.47182 * 44.36531 * 17 16 15 37 37 H 0.96696 * 113.99887 * 180.02562 * 18 17 16 38 38 H 1.48497 * 110.00235 * 60.00100 * 19 17 16 39 39 H 1.48503 * 109.99775 * 181.32092 * 19 17 16 40 40 H 1.08009 * 120.00197 * 179.97438 * 20 16 15 41 41 H 1.07997 * 120.00232 * 179.72174 * 21 20 16 42 42 H 1.07999 * 119.99287 * 180.02562 * 22 21 20 43 43 H 1.08005 * 119.99795 * 179.97438 * 23 22 21 44 44 H 1.08997 * 113.61534 * 105.46680 * 24 6 5 45 45 H 1.09001 * 113.61210 * 334.55844 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 1 1.8054 0.9512 0.0000 4 6 1.9587 -0.6927 1.1994 5 6 1.9586 -0.6924 -1.1995 6 6 1.5538 0.0978 -2.4455 7 1 1.7105 1.1710 -2.3368 8 6 2.1233 -0.4787 -3.7525 9 6 0.7620 -0.1609 -4.3936 10 1 0.7028 0.8410 -4.8187 11 7 0.2905 -1.1983 -5.3143 12 16 -0.5692 -0.7775 -6.6656 13 8 -1.5805 0.1225 -6.2337 14 8 -0.8490 -1.9876 -7.3561 15 6 0.5114 0.1493 -7.7037 16 6 1.6323 -0.4508 -8.2455 17 6 1.9307 -1.8977 -7.9480 18 8 2.4466 -2.0144 -6.6205 19 14 3.1917 -2.5343 -9.1625 20 6 2.4805 0.2766 -9.0597 21 6 2.2071 1.6037 -9.3326 22 6 1.0849 2.2036 -8.7917 23 6 0.2379 1.4768 -7.9766 24 6 0.1605 -0.2699 -2.9825 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3633 0.5139 0.8901 27 1 -0.3633 0.5139 -0.8899 28 1 3.0487 -0.6930 1.1991 29 1 1.5955 -0.1788 2.0894 30 1 1.5953 -1.7202 1.1993 31 1 1.5240 -1.6910 -1.2455 32 1 3.0449 -0.7707 -1.1560 33 1 2.3430 -1.5450 -3.7003 34 1 2.9470 0.1035 -4.1657 35 1 0.4819 -2.1317 -5.1324 36 1 1.0151 -2.4827 -8.0347 37 1 2.6617 -2.9206 -6.3604 38 1 4.4448 -1.7449 -9.0543 39 1 3.4709 -3.9690 -8.8997 40 1 3.3568 -0.1922 -9.4828 41 1 2.8721 2.1731 -9.9649 42 1 0.8711 3.2404 -9.0052 43 1 -0.6385 1.9456 -7.5538 44 1 -0.6006 0.4817 -2.7730 45 1 -0.1563 -1.2792 -2.7197 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16607758_2726874.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:34:07 Heat of formation + Delta-G solvation = 91.728061 kcal Electronic energy + Delta-G solvation = -27765.553569 eV Core-core repulsion = 23997.651931 eV Total energy + Delta-G solvation = -3767.901637 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.142 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -44.49137 -41.57519 -41.41358 -39.37695 -38.54450 -37.77203 -35.72887 -33.86661 -33.26338 -32.07094 -31.90023 -28.43141 -28.03306 -27.83228 -25.59549 -25.26700 -23.58757 -22.84702 -21.79317 -21.32716 -20.27434 -20.07681 -19.70021 -19.54915 -19.31918 -18.56228 -17.99404 -17.83714 -17.66435 -16.88106 -16.84975 -16.58646 -16.32881 -16.05117 -16.00689 -15.96493 -15.88282 -15.57512 -15.47025 -15.20634 -15.06037 -14.92349 -14.77396 -14.65153 -14.38695 -14.19724 -13.99379 -13.86302 -13.67222 -13.45738 -13.18896 -13.07930 -12.81409 -12.48218 -11.67605 -11.44861 -11.29748 -10.91056 -5.76748 -1.57329 -1.43827 -1.13808 -0.72546 0.34833 0.50238 0.55241 0.71756 0.75567 0.93659 1.05263 1.32810 1.42589 1.47713 1.66888 1.67819 1.73293 1.80282 1.86561 1.99063 2.03861 2.16793 2.19865 2.23042 2.28699 2.31226 2.37105 2.48369 2.70116 2.76120 2.90597 3.02227 3.07018 3.09126 3.14915 3.25945 3.29380 3.42752 3.47180 3.56766 3.72553 3.86682 3.93606 4.12498 4.30596 4.44350 4.82839 4.86076 5.28768 Molecular weight = 328.14amu Principal moments of inertia in cm(-1) A = 0.015273 B = 0.004334 C = 0.004048 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1832.854012 B = 6459.626318 C = 6915.528215 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 N -0.386 5.386 3 H 0.427 0.573 4 C -0.048 4.048 5 C 0.003 3.997 6 C -0.150 4.150 7 H 0.116 0.884 8 C -0.120 4.120 9 C 0.145 3.855 10 H 0.116 0.884 11 N -1.088 6.088 12 S 2.695 3.305 13 O -0.956 6.956 14 O -0.952 6.952 15 C -0.663 4.663 16 C 0.036 3.964 17 C -0.131 4.131 18 O -0.532 6.532 19 Si 0.701 3.299 20 C -0.138 4.138 21 C -0.053 4.053 22 C -0.132 4.132 23 C -0.024 4.024 24 C -0.161 4.161 25 H 0.122 0.878 26 H 0.123 0.877 27 H 0.128 0.872 28 H 0.123 0.877 29 H 0.124 0.876 30 H 0.121 0.879 31 H 0.130 0.870 32 H 0.132 0.868 33 H 0.101 0.899 34 H 0.089 0.911 35 H 0.420 0.580 36 H 0.113 0.887 37 H 0.382 0.618 38 H -0.252 1.252 39 H -0.254 1.254 40 H 0.138 0.862 41 H 0.138 0.862 42 H 0.138 0.862 43 H 0.146 0.854 44 H 0.089 0.911 45 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.043 2.440 24.782 25.407 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 N 0.038 4.962 3 H 0.262 0.738 4 C -0.190 4.190 5 C -0.119 4.119 6 C -0.169 4.169 7 H 0.134 0.866 8 C -0.160 4.160 9 C 0.036 3.964 10 H 0.133 0.867 11 N -0.846 5.846 12 S 2.785 3.215 13 O -0.946 6.946 14 O -0.942 6.942 15 C -0.750 4.750 16 C 0.035 3.965 17 C -0.240 4.240 18 O -0.340 6.340 19 Si 0.601 3.399 20 C -0.157 4.157 21 C -0.071 4.071 22 C -0.151 4.151 23 C -0.044 4.044 24 C -0.200 4.200 25 H 0.140 0.860 26 H 0.141 0.859 27 H 0.146 0.854 28 H 0.141 0.859 29 H 0.143 0.857 30 H 0.140 0.860 31 H 0.148 0.852 32 H 0.150 0.850 33 H 0.119 0.881 34 H 0.108 0.892 35 H 0.256 0.744 36 H 0.131 0.869 37 H 0.230 0.770 38 H -0.176 1.176 39 H -0.178 1.178 40 H 0.155 0.845 41 H 0.156 0.844 42 H 0.156 0.844 43 H 0.164 0.836 44 H 0.108 0.892 45 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 4.734 2.420 24.432 25.004 hybrid contribution 0.981 -0.161 0.780 1.264 sum 5.716 2.259 25.212 25.950 Atomic orbital electron populations 1.24330 0.75884 1.09744 1.09841 1.45095 1.16485 1.18956 1.15622 0.73831 1.24132 1.05605 1.02453 0.86774 1.24083 1.05023 0.99800 0.82971 1.23044 0.99925 1.00969 0.92987 0.86605 1.23296 0.98272 1.02950 0.91435 1.21937 0.93946 0.92103 0.88437 0.86663 1.55356 1.74470 1.15539 1.39185 1.01918 0.73034 0.73668 0.72858 1.93607 1.53474 1.66311 1.81193 1.93597 1.83148 1.44772 1.72650 1.30636 1.15101 1.08389 1.20903 1.18736 0.91789 0.92803 0.93174 1.25385 1.08896 0.97042 0.92671 1.86516 1.85999 1.33416 1.28043 0.93866 0.78405 0.79539 0.88071 1.21337 0.99828 0.95045 0.99463 1.21559 0.95880 0.94325 0.95372 1.21444 0.94940 1.01003 0.97744 1.21058 0.98032 0.91312 0.93963 1.23937 0.95136 1.03798 0.97172 0.85994 0.85854 0.85371 0.85885 0.85738 0.86033 0.85154 0.85009 0.88097 0.89240 0.74396 0.86899 0.76958 1.17636 1.17819 0.84453 0.84368 0.84367 0.83649 0.89241 0.88133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 1.73 8.57 60.07 0.51 2.25 16 2 N -0.39 12.57 0.66 -251.25 -0.17 12.41 16 3 H 0.43 -14.62 8.41 -39.29 -0.33 -14.95 16 4 C -0.05 1.51 9.19 60.07 0.55 2.06 16 5 C 0.00 -0.08 4.57 -3.83 -0.02 -0.10 16 6 C -0.15 3.95 3.31 -89.80 -0.30 3.65 16 7 H 0.12 -3.16 8.10 -51.93 -0.42 -3.58 16 8 C -0.12 2.62 7.43 -25.92 -0.19 2.43 16 9 C 0.14 -2.73 4.35 -67.11 -0.29 -3.02 16 10 H 0.12 -2.07 8.05 -51.93 -0.42 -2.49 16 11 N -1.09 17.19 4.05 -4.19 -0.02 17.18 16 12 S 2.70 -27.51 5.01 -107.50 -0.54 -28.05 16 13 O -0.96 7.31 16.73 -57.17 -0.96 6.35 16 14 O -0.95 6.58 15.54 -57.17 -0.89 5.69 16 15 C -0.66 6.48 5.88 -39.58 -0.23 6.25 16 16 C 0.04 -0.36 5.28 -104.63 -0.55 -0.91 16 17 C -0.13 1.46 2.02 36.00 0.07 1.54 16 18 O -0.53 7.58 10.54 -35.23 -0.37 7.21 16 19 Si 0.70 -7.41 30.22 -169.99 -5.14 -12.55 16 20 C -0.14 1.37 8.66 -39.58 -0.34 1.03 16 21 C -0.05 0.55 10.05 -39.58 -0.40 0.16 16 22 C -0.13 1.38 10.05 -39.59 -0.40 0.98 16 23 C -0.02 0.24 9.55 -39.59 -0.38 -0.14 16 24 C -0.16 3.70 5.69 -25.91 -0.15 3.56 16 25 H 0.12 -3.71 8.11 -51.93 -0.42 -4.13 16 26 H 0.12 -3.81 8.14 -51.92 -0.42 -4.23 16 27 H 0.13 -3.81 5.13 -51.93 -0.27 -4.08 16 28 H 0.12 -3.87 8.11 -51.93 -0.42 -4.29 16 29 H 0.12 -3.91 8.14 -51.93 -0.42 -4.33 16 30 H 0.12 -3.78 8.14 -51.93 -0.42 -4.20 16 31 H 0.13 -3.94 7.79 -51.93 -0.40 -4.35 16 32 H 0.13 -4.03 8.09 -51.93 -0.42 -4.45 16 33 H 0.10 -2.26 8.10 -51.93 -0.42 -2.68 16 34 H 0.09 -1.79 8.14 -51.93 -0.42 -2.21 16 35 H 0.42 -7.43 8.42 -34.47 -0.29 -7.72 16 36 H 0.11 -1.20 5.39 -51.93 -0.28 -1.48 16 37 H 0.38 -6.69 8.74 45.56 0.40 -6.29 16 38 H -0.25 2.13 6.73 56.52 0.38 2.51 16 39 H -0.25 2.14 7.11 56.52 0.40 2.54 16 40 H 0.14 -1.49 4.91 -52.48 -0.26 -1.75 16 41 H 0.14 -1.69 8.06 -52.49 -0.42 -2.12 16 42 H 0.14 -1.68 8.06 -52.49 -0.42 -2.11 16 43 H 0.15 -1.58 7.34 -52.48 -0.39 -1.97 16 44 H 0.09 -2.03 7.18 -51.93 -0.37 -2.40 16 45 H 0.10 -2.38 7.90 -51.93 -0.41 -2.79 16 LS Contribution 359.60 15.07 5.42 5.42 Total: 1.00 -38.51 359.60 -11.64 -50.15 By element: Atomic # 1 Polarization: -76.66 SS G_CDS: -6.88 Total: -83.54 kcal Atomic # 6 Polarization: 21.84 SS G_CDS: -2.11 Total: 19.74 kcal Atomic # 7 Polarization: 29.77 SS G_CDS: -0.18 Total: 29.58 kcal Atomic # 8 Polarization: 21.47 SS G_CDS: -2.22 Total: 19.25 kcal Atomic # 14 Polarization: -7.41 SS G_CDS: -5.14 Total: -12.55 kcal Atomic # 16 Polarization: -27.51 SS G_CDS: -0.54 Total: -28.05 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -38.51 -11.64 -50.15 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16607758_2726874.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 141.876 kcal (2) G-P(sol) polarization free energy of solvation -38.510 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 103.367 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -50.148 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.74 seconds