Wall clock time and date at job start Mon Mar 8 2021 10:34:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33392 * 125.20142 * 2 1 4 4 C 1.50699 * 122.54143 * 359.97273 * 3 2 1 5 5 O 1.42897 * 109.47181 * 76.21983 * 4 3 2 6 6 Si 1.86298 * 109.47372 * 316.21697 * 4 3 2 7 7 C 1.38428 * 114.91476 * 180.21493 * 3 2 1 8 8 S 1.76201 * 122.53656 * 179.75983 * 7 3 2 9 9 O 1.42111 * 106.40155 * 25.17508 * 8 7 3 10 10 O 1.42093 * 106.40313 * 158.09266 * 8 7 3 11 11 N 1.65600 * 107.21870 * 271.63475 * 8 7 3 12 12 C 1.46500 * 119.99811 * 65.00194 * 11 8 7 13 13 H 1.08999 * 112.85170 * 344.66159 * 12 11 8 14 14 C 1.53778 * 113.61854 * 115.86590 * 12 11 8 15 15 C 1.54055 * 86.98533 * 89.15531 * 14 12 11 16 16 H 1.08995 * 113.61282 * 270.88541 * 15 14 12 17 17 C 1.53008 * 113.61438 * 139.98176 * 15 14 12 18 18 N 1.46904 * 109.47061 * 87.50733 * 17 15 14 19 19 H 1.00904 * 109.46712 * 304.99687 * 18 17 15 20 20 C 1.46896 * 109.46909 * 64.99766 * 18 17 15 21 21 C 1.46894 * 109.46868 * 184.99709 * 18 17 15 22 22 C 1.53773 * 87.07482 * 25.43603 * 15 14 12 23 23 C 1.33385 * 114.92229 * 359.48687 * 7 3 2 24 24 C 1.50700 * 125.19972 * 180.25468 * 23 7 3 25 25 S 1.75880 * 109.59459 * 0.27511 * 23 7 3 26 26 H 1.09003 * 109.47165 * 184.89165 * 1 2 3 27 27 H 1.09004 * 109.46619 * 304.89061 * 1 2 3 28 28 H 1.08998 * 109.47268 * 64.88616 * 1 2 3 29 29 H 1.09010 * 109.46630 * 196.21664 * 4 3 2 30 30 H 0.96700 * 114.00112 * 65.81920 * 5 4 3 31 31 H 1.48493 * 110.00055 * 174.76397 * 6 4 3 32 32 H 1.48508 * 109.99885 * 296.08476 * 6 4 3 33 33 H 0.96998 * 119.99912 * 244.99882 * 11 8 7 34 34 H 1.08998 * 113.62010 * 203.66118 * 14 12 11 35 35 H 1.09002 * 113.60902 * 334.56283 * 14 12 11 36 36 H 1.08995 * 109.46872 * 207.50482 * 17 15 14 37 37 H 1.08993 * 109.47218 * 327.50228 * 17 15 14 38 38 H 1.08996 * 109.47539 * 299.99734 * 20 18 17 39 39 H 1.09000 * 109.47570 * 60.00020 * 20 18 17 40 40 H 1.09002 * 109.46910 * 180.02562 * 20 18 17 41 41 H 1.08997 * 109.47437 * 60.00056 * 21 18 17 42 42 H 1.09002 * 109.47143 * 179.97438 * 21 18 17 43 43 H 1.08996 * 109.47451 * 299.99996 * 21 18 17 44 44 H 1.09006 * 113.61369 * 220.01659 * 22 15 14 45 45 H 1.09000 * 113.62046 * 89.11943 * 22 15 14 46 46 H 1.09001 * 109.47293 * 90.00350 * 24 23 7 47 47 H 1.08999 * 109.46969 * 209.99890 * 24 23 7 48 48 H 1.09000 * 109.47438 * 329.99692 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2759 1.0900 0.0000 4 6 1.7051 2.4847 -0.0006 5 8 1.2272 2.8044 1.3076 6 14 0.2968 2.5789 -1.2165 7 6 3.6380 0.8428 -0.0047 8 16 4.8356 2.1352 -0.0118 9 8 4.2057 3.2693 0.5683 10 8 6.0379 1.5708 0.4933 11 7 5.1297 2.5223 -1.5948 12 6 4.0648 3.1020 -2.4171 13 1 3.0762 2.9856 -1.9731 14 6 4.3627 4.5344 -2.8906 15 6 5.0401 3.9001 -4.1203 16 1 6.0990 3.6871 -3.9740 17 6 4.7571 4.6433 -5.4274 18 7 5.7494 5.7113 -5.6083 19 1 5.7500 6.3108 -4.7966 20 6 7.0821 5.1175 -5.7794 21 6 5.4082 6.5002 -6.7995 22 6 4.1297 2.6816 -3.8949 23 6 3.9750 -0.4477 0.0023 24 6 5.3860 -0.9770 0.0047 25 16 2.5209 -1.4371 0.0077 26 1 -0.3633 -1.0239 0.0876 27 1 -0.3633 0.5879 0.8430 28 1 -0.3634 0.4361 -0.9305 29 1 2.4810 3.1946 -0.2875 30 1 1.9225 2.8623 1.9771 31 1 -0.3555 3.9104 -1.1360 32 1 0.7983 2.3414 -2.5940 33 1 6.0070 2.3652 -1.9776 34 1 3.4687 5.1092 -3.1326 35 1 5.0515 5.0746 -2.2410 36 1 4.8180 3.9456 -6.2626 37 1 3.7583 5.0780 -5.3893 38 1 7.3354 4.5322 -4.8956 39 1 7.0815 4.4699 -6.6562 40 1 7.8185 5.9100 -5.9131 41 1 4.4193 6.9408 -6.6725 42 1 6.1442 7.2929 -6.9334 43 1 5.4075 5.8526 -7.6762 44 1 4.6303 1.7267 -4.0557 45 1 3.1720 2.7505 -4.4110 46 1 5.7266 -1.0990 1.0329 47 1 5.4134 -1.9408 -0.5038 48 1 6.0386 -0.2743 -0.5133 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16607760_15065288.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:34:26 Heat of formation + Delta-G solvation = 91.999918 kcal Electronic energy + Delta-G solvation = -30694.640843 eV Core-core repulsion = 26704.828003 eV Total energy + Delta-G solvation = -3989.812840 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.129 amu Computer time = 1.98 seconds Orbital eigenvalues (eV) -44.54361 -41.83847 -41.07584 -39.52632 -37.98347 -37.72715 -35.79784 -35.20960 -32.14350 -31.91656 -31.73429 -28.95511 -28.76461 -28.11432 -26.84433 -25.92477 -24.11657 -22.73712 -22.12556 -21.62989 -20.96127 -20.34572 -20.02343 -19.65131 -19.41510 -19.00333 -18.74712 -17.96854 -17.47472 -17.37824 -17.04803 -16.97933 -16.35935 -16.34687 -16.23571 -16.06496 -15.92730 -15.79429 -15.68371 -15.61080 -15.43542 -15.25140 -15.10687 -15.06157 -14.91161 -14.63562 -14.35332 -14.29598 -14.18559 -13.89592 -13.79357 -13.61210 -13.59710 -13.34656 -13.23811 -12.93496 -12.61825 -12.07000 -12.01894 -11.77533 -10.87250 -10.38365 -5.63845 -1.84301 -1.51984 -1.29211 -0.47430 -0.15923 -0.00518 0.43549 0.47728 0.48064 0.59791 0.67307 0.81817 1.12319 1.21678 1.28225 1.51785 1.56652 1.63127 1.63202 1.74691 1.83898 1.96116 2.03882 2.09364 2.16537 2.20754 2.26531 2.33059 2.54555 2.59156 2.80342 2.86049 2.87685 3.00200 3.05868 3.13149 3.15383 3.24289 3.31892 3.34914 3.52568 3.59160 3.61437 3.69155 3.76537 4.02029 4.13543 4.19191 4.38049 4.48916 5.84734 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.012101 B = 0.004066 C = 0.003620 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2313.366482 B = 6885.266150 C = 7733.598468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C -0.168 4.168 3 C -0.086 4.086 4 C -0.079 4.079 5 O -0.525 6.525 6 Si 0.697 3.303 7 C -0.690 4.690 8 S 2.704 3.296 9 O -0.944 6.944 10 O -0.943 6.943 11 N -1.100 6.100 12 C 0.124 3.876 13 H 0.107 0.893 14 C -0.160 4.160 15 C -0.150 4.150 16 H 0.117 0.883 17 C -0.001 4.001 18 N -0.388 5.388 19 H 0.428 0.572 20 C -0.052 4.052 21 C -0.048 4.048 22 C -0.131 4.131 23 C -0.052 4.052 24 C -0.114 4.114 25 S 0.180 5.820 26 H 0.088 0.912 27 H 0.102 0.898 28 H 0.091 0.909 29 H 0.090 0.910 30 H 0.373 0.627 31 H -0.241 1.241 32 H -0.246 1.246 33 H 0.419 0.581 34 H 0.106 0.894 35 H 0.093 0.907 36 H 0.133 0.867 37 H 0.133 0.867 38 H 0.123 0.877 39 H 0.123 0.877 40 H 0.125 0.875 41 H 0.124 0.876 42 H 0.125 0.875 43 H 0.122 0.878 44 H 0.095 0.905 45 H 0.107 0.893 46 H 0.102 0.898 47 H 0.084 0.916 48 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.152 11.609 -23.214 27.205 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.286 4.286 3 C -0.097 4.097 4 C -0.191 4.191 5 O -0.331 6.331 6 Si 0.594 3.406 7 C -0.790 4.790 8 S 2.793 3.207 9 O -0.934 6.934 10 O -0.933 6.933 11 N -0.858 5.858 12 C 0.015 3.985 13 H 0.125 0.875 14 C -0.199 4.199 15 C -0.169 4.169 16 H 0.134 0.866 17 C -0.122 4.122 18 N 0.037 4.963 19 H 0.263 0.737 20 C -0.194 4.194 21 C -0.190 4.190 22 C -0.171 4.171 23 C -0.173 4.173 24 C -0.172 4.172 25 S 0.447 5.553 26 H 0.107 0.893 27 H 0.120 0.880 28 H 0.108 0.892 29 H 0.107 0.893 30 H 0.221 0.779 31 H -0.165 1.165 32 H -0.170 1.170 33 H 0.254 0.746 34 H 0.124 0.876 35 H 0.112 0.888 36 H 0.151 0.849 37 H 0.151 0.849 38 H 0.141 0.859 39 H 0.142 0.858 40 H 0.144 0.856 41 H 0.142 0.858 42 H 0.143 0.857 43 H 0.141 0.859 44 H 0.114 0.886 45 H 0.126 0.874 46 H 0.121 0.879 47 H 0.103 0.897 48 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 7.153 10.679 -23.617 26.888 hybrid contribution 1.834 1.365 0.452 2.330 sum 8.987 12.044 -23.165 27.612 Atomic orbital electron populations 1.20449 0.86889 1.04026 1.03430 1.24487 1.00593 0.95044 1.08476 1.18627 0.90100 0.97346 1.03582 1.25659 1.08383 0.90853 0.94167 1.86667 1.37139 1.92389 1.16900 0.92257 0.86015 0.87720 0.74591 1.29331 1.11681 1.13066 1.24970 1.01745 0.73336 0.73653 0.72015 1.93579 1.76902 1.48687 1.74234 1.93648 1.44302 1.78974 1.76371 1.55542 1.20259 1.78117 1.31872 1.21624 0.91213 0.93424 0.92216 0.87517 1.23825 1.02233 0.97807 0.96063 1.23346 1.02520 0.99035 0.91994 0.86553 1.24129 0.93895 0.90885 1.03333 1.45034 1.15950 1.17059 1.18250 0.73725 1.24192 0.81630 1.04483 1.09130 1.24149 1.07823 0.99421 0.87566 1.23364 1.00549 0.97576 0.95561 1.24632 1.01083 0.95155 0.96459 1.20941 0.88047 1.02525 1.05696 1.84653 0.94573 1.07879 1.68163 0.89310 0.87992 0.89170 0.89285 0.77863 1.16456 1.17047 0.74580 0.87562 0.88796 0.84904 0.84856 0.85880 0.85836 0.85630 0.85795 0.85659 0.85917 0.88635 0.87446 0.87927 0.89732 0.88766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 26. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 1.04 8.36 36.01 0.30 1.34 16 2 C -0.17 1.62 6.11 -36.00 -0.22 1.40 16 3 C -0.09 0.81 4.68 -106.25 -0.50 0.31 16 4 C -0.08 0.73 1.51 36.01 0.05 0.78 16 5 O -0.53 3.76 12.63 -35.23 -0.45 3.31 16 6 Si 0.70 -7.41 26.45 -169.99 -4.50 -11.90 16 7 C -0.69 6.75 5.86 -41.21 -0.24 6.51 16 8 S 2.70 -29.19 5.26 -107.50 -0.57 -29.76 16 9 O -0.94 7.84 14.51 -57.17 -0.83 7.01 16 10 O -0.94 7.64 14.95 -57.17 -0.85 6.79 16 11 N -1.10 18.21 5.73 -4.20 -0.02 18.18 16 12 C 0.12 -2.26 4.34 -67.12 -0.29 -2.55 16 13 H 0.11 -1.70 4.05 -51.93 -0.21 -1.91 16 14 C -0.16 3.58 7.45 -25.78 -0.19 3.39 16 15 C -0.15 3.95 3.41 -89.66 -0.31 3.65 16 16 H 0.12 -3.22 6.09 -51.93 -0.32 -3.54 16 17 C 0.00 0.03 4.48 -3.82 -0.02 0.01 16 18 N -0.39 12.65 0.66 -251.27 -0.17 12.48 16 19 H 0.43 -14.47 8.44 -39.29 -0.33 -14.80 16 20 C -0.05 1.66 8.98 60.06 0.54 2.19 16 21 C -0.05 1.52 9.19 60.06 0.55 2.07 16 22 C -0.13 2.87 7.42 -25.92 -0.19 2.68 16 23 C -0.05 0.51 6.50 -36.00 -0.23 0.27 16 24 C -0.11 1.24 9.11 36.01 0.33 1.56 16 25 S 0.18 -1.77 23.31 -107.50 -2.51 -4.28 16 26 H 0.09 -1.09 8.14 -51.93 -0.42 -1.51 16 27 H 0.10 -1.13 7.84 -51.93 -0.41 -1.54 16 28 H 0.09 -1.20 4.68 -51.93 -0.24 -1.45 16 29 H 0.09 -0.91 3.27 -51.92 -0.17 -1.08 16 30 H 0.37 -3.08 9.09 45.56 0.41 -2.67 16 31 H -0.24 1.89 7.11 56.52 0.40 2.29 16 32 H -0.25 2.98 7.11 56.52 0.40 3.39 16 33 H 0.42 -8.12 8.81 -34.47 -0.30 -8.42 16 34 H 0.11 -2.48 7.90 -51.93 -0.41 -2.89 16 35 H 0.09 -2.04 8.14 -51.93 -0.42 -2.46 16 36 H 0.13 -4.07 8.09 -51.93 -0.42 -4.49 16 37 H 0.13 -4.07 7.79 -51.93 -0.40 -4.48 16 38 H 0.12 -3.83 6.10 -51.93 -0.32 -4.15 16 39 H 0.12 -3.86 8.11 -51.93 -0.42 -4.28 16 40 H 0.13 -3.95 8.14 -51.93 -0.42 -4.37 16 41 H 0.12 -3.91 8.11 -51.93 -0.42 -4.33 16 42 H 0.12 -3.95 8.14 -51.93 -0.42 -4.38 16 43 H 0.12 -3.85 8.14 -51.93 -0.42 -4.27 16 44 H 0.10 -2.04 8.14 -51.93 -0.42 -2.46 16 45 H 0.11 -2.38 8.10 -51.93 -0.42 -2.80 16 46 H 0.10 -1.04 8.14 -51.93 -0.42 -1.46 16 47 H 0.08 -1.04 8.14 -51.93 -0.42 -1.46 16 48 H 0.09 -1.12 6.18 -51.93 -0.32 -1.44 16 LS Contribution 382.90 15.07 5.77 5.77 Total: 1.00 -37.92 382.90 -11.81 -49.73 By element: Atomic # 1 Polarization: -73.69 SS G_CDS: -7.28 Total: -80.97 kcal Atomic # 6 Polarization: 24.05 SS G_CDS: -0.42 Total: 23.64 kcal Atomic # 7 Polarization: 30.85 SS G_CDS: -0.19 Total: 30.67 kcal Atomic # 8 Polarization: 19.24 SS G_CDS: -2.13 Total: 17.11 kcal Atomic # 14 Polarization: -7.41 SS G_CDS: -4.50 Total: -11.90 kcal Atomic # 16 Polarization: -30.96 SS G_CDS: -3.07 Total: -34.04 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -37.92 -11.81 -49.73 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16607760_15065288.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 141.732 kcal (2) G-P(sol) polarization free energy of solvation -37.917 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 103.815 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.732 kcal (6) G-S(sol) free energy of system = (1) + (5) 92.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.98 seconds