Wall clock time and date at job start Mon Mar 8 2021 11:00:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42901 * 113.99601 * 2 1 4 4 C 1.53004 * 112.84870 * 65.99265 * 3 2 1 5 5 F 1.39906 * 109.46955 * 283.51815 * 4 3 2 6 6 F 1.39896 * 109.47210 * 43.51975 * 4 3 2 7 7 F 1.39898 * 109.47143 * 163.52258 * 4 3 2 8 8 C 1.53784 * 113.61793 * 294.79623 * 3 2 1 9 9 C 1.53785 * 87.07795 * 270.80064 * 8 3 2 10 10 H 1.09001 * 113.60857 * 219.92999 * 9 8 3 11 11 C 1.52998 * 113.61377 * 89.11476 * 9 8 3 12 12 S 1.81407 * 109.46973 * 176.52663 * 11 9 8 13 13 O 1.42094 * 110.54227 * 291.62353 * 12 11 9 14 14 O 1.42103 * 110.53896 * 68.37391 * 12 11 9 15 15 O 1.52202 * 104.44841 * 179.97438 * 12 11 9 16 16 C 1.35894 * 113.99851 * 75.00089 * 15 12 11 17 17 C 1.38763 * 120.02254 * 89.99646 * 16 15 12 18 18 C 1.50697 * 119.96170 * 0.02562 * 17 16 15 19 19 O 1.42901 * 109.47093 * 74.99449 * 18 17 16 20 20 Si 1.86297 * 109.47270 * 194.99689 * 18 17 16 21 21 C 1.38212 * 120.07854 * 179.97438 * 17 16 15 22 22 C 1.38136 * 120.11931 * 0.02609 * 21 17 16 23 23 C 1.38890 * 120.04632 * 359.97438 * 22 21 17 24 24 N 1.40177 * 120.03722 * 179.97438 * 23 22 21 25 25 C 1.35224 * 126.05885 * 4.99414 * 24 23 22 26 26 C 1.35311 * 107.71746 * 179.97438 * 25 24 23 27 27 C 1.39928 * 107.93073 * 0.02562 * 26 25 24 28 28 N 1.30868 * 108.24452 * 359.75315 * 27 26 25 29 29 C 1.38644 * 120.02365 * 269.72367 * 16 15 12 30 30 C 1.53780 * 87.17329 * 334.52240 * 9 8 3 31 31 H 1.09002 * 109.46775 * 182.53245 * 1 2 3 32 32 H 1.09004 * 109.47114 * 302.52496 * 1 2 3 33 33 H 1.08994 * 109.47241 * 62.52930 * 1 2 3 34 34 H 1.08998 * 113.61767 * 156.24794 * 8 3 2 35 35 H 1.08998 * 113.60902 * 25.34704 * 8 3 2 36 36 H 1.09005 * 109.47146 * 56.52707 * 11 9 8 37 37 H 1.09003 * 109.47008 * 296.52509 * 11 9 8 38 38 H 1.09003 * 109.46995 * 314.99812 * 18 17 16 39 39 H 0.96703 * 113.99856 * 60.00397 * 19 18 17 40 40 H 1.48496 * 109.99955 * 58.67722 * 20 18 17 41 41 H 1.48493 * 109.99991 * 180.02562 * 20 18 17 42 42 H 1.07996 * 119.94270 * 180.02562 * 21 17 16 43 43 H 1.07996 * 119.97405 * 179.97438 * 22 21 17 44 44 H 1.08008 * 126.14026 * 359.97438 * 25 24 23 45 45 H 1.08003 * 126.04090 * 180.02562 * 26 25 24 46 46 H 1.07998 * 125.87695 * 180.02562 * 27 26 25 47 47 H 1.08000 * 120.05777 * 359.97438 * 29 16 15 48 48 H 1.09005 * 113.61271 * 140.02352 * 30 9 8 49 49 H 1.09004 * 113.61295 * 270.92631 * 30 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7277 2.0816 1.2880 5 9 0.4113 2.5548 1.2681 6 9 1.9031 1.2370 2.3893 7 9 2.6104 3.1627 1.3841 8 6 1.7209 2.1087 -1.2791 9 6 2.9980 1.4843 -1.8658 10 1 3.5934 2.1812 -2.4557 11 6 2.7565 0.1544 -2.5827 12 16 4.3101 -0.4281 -3.3159 13 8 4.7041 0.4184 -4.3870 14 8 5.2313 -0.8020 -2.3005 15 8 3.9425 -1.7419 -3.9907 16 6 3.2490 -1.5928 -5.1499 17 6 3.9271 -1.4900 -6.3562 18 6 5.4329 -1.5443 -6.3802 19 8 5.8641 -2.8917 -6.1787 20 14 6.0501 -0.9347 -8.0289 21 6 3.2229 -1.3388 -7.5359 22 6 1.8426 -1.2891 -7.5177 23 6 1.1588 -1.3915 -6.3132 24 7 -0.2419 -1.3404 -6.2949 25 6 -1.0507 -1.2904 -7.3774 26 6 -2.3289 -1.2524 -6.9350 27 6 -2.3017 -1.2796 -5.5363 28 7 -1.0520 -1.3373 -5.1519 29 6 1.8635 -1.5489 -5.1286 30 6 3.4926 1.3231 -0.4187 31 1 -0.3633 -1.0267 0.0454 32 1 -0.3633 0.5526 0.8665 33 1 -0.3633 0.4740 -0.9117 34 1 1.7860 3.1879 -1.1412 35 1 0.8093 1.8007 -1.7912 36 1 2.0140 0.2947 -3.3683 37 1 2.3933 -0.5834 -1.8671 38 1 5.8319 -0.9126 -5.5866 39 1 5.5455 -3.5112 -6.8495 40 1 5.5815 0.4545 -8.2645 41 1 7.5337 -0.9840 -8.0655 42 1 3.7528 -1.2594 -8.4735 43 1 1.2948 -1.1705 -8.4409 44 1 -0.7335 -1.2821 -8.4098 45 1 -3.2140 -1.2088 -7.5525 46 1 -3.1637 -1.2609 -4.8860 47 1 1.3339 -1.6336 -4.1912 48 1 4.0104 0.3814 -0.2366 49 1 4.0414 2.1881 -0.0459 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16772190_17541816.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:00:27 Heat of formation + Delta-G solvation = -161.149150 kcal Electronic energy + Delta-G solvation = -45764.385866 eV Core-core repulsion = 39568.769657 eV Total energy + Delta-G solvation = -6195.616209 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 449.104 amu Computer time = 2.38 seconds Orbital eigenvalues (eV) -51.20077 -48.74939 -48.62448 -42.97898 -42.30314 -41.59074 -39.67245 -38.37831 -37.89552 -37.49104 -37.23789 -34.77229 -32.62260 -31.84785 -31.23562 -30.99014 -28.54886 -27.91416 -27.00522 -26.95803 -25.23646 -23.96742 -23.69793 -22.90236 -22.04037 -21.37107 -20.79099 -20.12768 -19.76096 -19.51268 -19.30204 -19.09904 -18.64999 -18.39418 -18.16890 -17.44396 -17.13496 -16.79803 -16.59904 -16.51932 -16.41368 -16.02418 -15.85480 -15.77514 -15.66948 -15.54326 -15.42443 -15.29008 -15.10543 -15.07619 -14.93269 -14.87009 -14.80545 -14.72588 -14.45176 -14.32644 -14.06097 -13.98028 -13.71875 -13.57348 -13.47004 -13.37593 -13.29035 -13.23198 -13.13729 -12.98034 -12.52033 -12.38090 -12.33319 -12.18013 -12.03259 -11.98024 -11.61713 -11.49913 -10.93225 -10.55537 -10.52186 -10.36736 -9.41252 -5.14279 -1.26714 -0.66742 -0.34056 0.74426 0.81237 1.09748 1.15997 1.50581 1.59515 1.61140 1.93186 1.96944 2.03817 2.34783 2.47574 2.56158 2.71893 2.73387 2.92761 3.04569 3.12743 3.20751 3.28512 3.30235 3.36721 3.44815 3.49880 3.57231 3.62271 3.75595 3.84242 3.92371 4.03696 4.06172 4.13575 4.21186 4.21951 4.25497 4.35638 4.38936 4.43054 4.43399 4.51756 4.56321 4.58073 4.62890 4.66894 4.70815 4.77429 4.78704 5.14545 5.38104 5.56227 5.78433 6.34778 6.50529 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.332 6.332 3 C 0.042 3.958 4 C 0.438 3.562 5 F -0.181 7.181 6 F -0.172 7.172 7 F -0.174 7.174 8 C -0.136 4.136 9 C -0.092 4.092 10 H 0.110 0.890 11 C -0.642 4.642 12 S 2.588 3.412 13 O -0.949 6.949 14 O -0.911 6.911 15 O -0.649 6.649 16 C 0.117 3.883 17 C -0.099 4.099 18 C -0.089 4.089 19 O -0.529 6.529 20 Si 0.694 3.306 21 C -0.067 4.067 22 C -0.119 4.119 23 C 0.190 3.810 24 N -0.331 5.331 25 C 0.056 3.944 26 C -0.253 4.253 27 C 0.065 3.935 28 N -0.292 5.292 29 C -0.138 4.138 30 C -0.128 4.128 31 H 0.103 0.897 32 H 0.055 0.945 33 H 0.056 0.944 34 H 0.114 0.886 35 H 0.098 0.902 36 H 0.141 0.859 37 H 0.158 0.842 38 H 0.125 0.875 39 H 0.379 0.621 40 H -0.246 1.246 41 H -0.247 1.247 42 H 0.157 0.843 43 H 0.150 0.850 44 H 0.183 0.817 45 H 0.159 0.841 46 H 0.193 0.807 47 H 0.158 0.842 48 H 0.110 0.890 49 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.743 -0.199 -8.726 11.030 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.250 6.250 3 C -0.001 4.001 4 C 0.383 3.617 5 F -0.162 7.162 6 F -0.153 7.153 7 F -0.155 7.155 8 C -0.175 4.175 9 C -0.111 4.111 10 H 0.128 0.872 11 C -0.768 4.768 12 S 2.683 3.317 13 O -0.947 6.947 14 O -0.909 6.909 15 O -0.607 6.607 16 C 0.074 3.926 17 C -0.103 4.103 18 C -0.198 4.198 19 O -0.334 6.334 20 Si 0.593 3.407 21 C -0.085 4.085 22 C -0.140 4.140 23 C 0.096 3.904 24 N -0.107 5.107 25 C -0.085 4.085 26 C -0.281 4.281 27 C -0.122 4.122 28 N -0.111 5.111 29 C -0.160 4.160 30 C -0.165 4.165 31 H 0.121 0.879 32 H 0.074 0.926 33 H 0.075 0.925 34 H 0.132 0.868 35 H 0.117 0.883 36 H 0.160 0.840 37 H 0.176 0.824 38 H 0.142 0.858 39 H 0.226 0.774 40 H -0.170 1.170 41 H -0.171 1.171 42 H 0.174 0.826 43 H 0.168 0.832 44 H 0.200 0.800 45 H 0.177 0.823 46 H 0.210 0.790 47 H 0.175 0.825 48 H 0.128 0.872 49 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -4.276 0.225 -7.667 8.782 hybrid contribution -1.920 0.529 0.837 2.160 sum -6.196 0.754 -6.830 9.252 Atomic orbital electron populations 1.23177 0.79291 1.04567 1.01653 1.88054 1.21310 1.21799 1.93823 1.23970 0.99531 0.86487 0.90061 1.21116 0.74332 0.78715 0.87499 1.93189 1.36894 1.89296 1.96829 1.93228 1.94937 1.70571 1.56601 1.93183 1.68799 1.56983 1.96561 1.23577 0.99254 1.00996 0.93629 1.21704 0.99424 0.94088 0.95906 0.87154 1.30848 1.24134 1.08214 1.13645 1.05784 0.77082 0.73401 0.75401 1.93630 1.80804 1.68321 1.51963 1.93680 1.57976 1.79888 1.59342 1.85768 1.74874 1.58372 1.41718 1.17444 0.88574 1.04459 0.82088 1.20624 0.97989 0.99777 0.91900 1.25451 0.90654 0.89194 1.14511 1.86620 1.75096 1.16629 1.55081 0.95543 0.82280 0.83680 0.79187 1.20771 0.92965 0.97578 0.97160 1.21012 0.94425 1.01885 0.96686 1.17067 0.79152 1.00185 0.93962 1.45817 1.03391 1.56196 1.05265 1.22724 0.90693 1.01337 0.93741 1.21734 0.97277 1.14071 0.95048 1.24206 0.94989 0.97332 0.95693 1.77481 1.02390 1.24597 1.06588 1.20939 0.91663 1.03502 0.99885 1.23566 0.91755 1.07039 0.94125 0.87855 0.92610 0.92543 0.86817 0.88331 0.84036 0.82434 0.85834 0.77393 1.17044 1.17139 0.82614 0.83199 0.79976 0.82334 0.78976 0.82463 0.87162 0.85536 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 25. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.43 101.05 1.05 1.04 16 2 O -0.33 -0.27 8.34 -35.23 -0.29 -0.56 16 3 C 0.04 0.01 0.85 -89.66 -0.08 -0.06 16 4 C 0.44 0.70 2.51 37.16 0.09 0.79 16 5 F -0.18 -0.29 15.24 2.25 0.03 -0.26 16 6 F -0.17 -0.57 17.09 2.25 0.04 -0.53 16 7 F -0.17 -0.27 15.82 2.25 0.04 -0.24 16 8 C -0.14 0.23 6.52 -25.91 -0.17 0.06 16 9 C -0.09 0.09 3.83 -89.81 -0.34 -0.25 16 10 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 11 C -0.64 0.40 5.07 37.16 0.19 0.59 16 12 S 2.59 7.08 4.92 -107.50 -0.53 6.55 16 13 O -0.95 -3.63 14.24 -67.03 -0.95 -4.59 16 14 O -0.91 -5.38 17.90 -67.04 -1.20 -6.58 16 15 O -0.65 -1.93 9.47 -51.73 -0.49 -2.42 16 16 C 0.12 0.18 4.78 -39.24 -0.19 -0.01 16 17 C -0.10 -0.04 4.68 -104.44 -0.49 -0.53 16 18 C -0.09 -0.14 2.23 36.00 0.08 -0.06 16 19 O -0.53 -0.77 12.88 -35.23 -0.45 -1.23 16 20 Si 0.69 -0.68 29.91 -169.99 -5.08 -5.77 16 21 C -0.07 0.19 8.65 -39.63 -0.34 -0.15 16 22 C -0.12 0.39 9.45 -39.38 -0.37 0.01 16 23 C 0.19 -0.15 6.68 -83.62 -0.56 -0.71 16 24 N -0.33 0.14 3.80 -10.71 -0.04 0.10 16 25 C 0.06 -0.14 10.79 -17.10 -0.18 -0.33 16 26 C -0.25 0.62 10.81 -39.99 -0.43 0.18 16 27 C 0.07 -0.09 12.03 -17.33 -0.21 -0.30 16 28 N -0.29 -0.20 11.88 30.64 0.36 0.17 16 29 C -0.14 -0.02 8.08 -39.25 -0.32 -0.34 16 30 C -0.13 0.01 6.92 -25.78 -0.18 -0.17 16 31 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 32 H 0.06 -0.03 6.25 -51.93 -0.32 -0.36 16 33 H 0.06 -0.13 6.76 -51.93 -0.35 -0.48 16 34 H 0.11 -0.32 8.06 -51.93 -0.42 -0.74 16 35 H 0.10 -0.25 6.70 -51.93 -0.35 -0.60 16 36 H 0.14 -0.34 6.63 -51.92 -0.34 -0.69 16 37 H 0.16 -0.15 6.09 -51.92 -0.32 -0.47 16 38 H 0.12 0.49 5.42 -51.93 -0.28 0.21 16 39 H 0.38 -1.38 8.70 45.56 0.40 -0.98 16 40 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 41 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 42 H 0.16 -0.96 5.12 -52.49 -0.27 -1.23 16 43 H 0.15 -0.99 6.76 -52.49 -0.35 -1.34 16 44 H 0.18 -1.15 7.06 -52.48 -0.37 -1.52 16 45 H 0.16 -0.72 8.06 -52.48 -0.42 -1.14 16 46 H 0.19 -0.83 8.06 -52.49 -0.42 -1.25 16 47 H 0.16 -0.08 7.17 -52.49 -0.38 -0.45 16 48 H 0.11 0.07 7.91 -51.93 -0.41 -0.34 16 49 H 0.13 -0.20 7.01 -51.93 -0.36 -0.57 16 LS Contribution 418.04 15.07 6.30 6.30 Total: 0.00 -12.86 418.04 -9.74 -22.60 By element: Atomic # 1 Polarization: -8.28 SS G_CDS: -5.02 Total: -13.30 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -2.44 Total: -0.23 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: 0.32 Total: 0.26 kcal Atomic # 8 Polarization: -11.98 SS G_CDS: -3.39 Total: -15.37 kcal Atomic # 9 Polarization: -1.14 SS G_CDS: 0.11 Total: -1.03 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.08 Total: -5.77 kcal Atomic # 16 Polarization: 7.08 SS G_CDS: -0.53 Total: 6.55 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -12.86 -9.74 -22.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16772190_17541816.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -138.554 kcal (2) G-P(sol) polarization free energy of solvation -12.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.411 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.738 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.596 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.149 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.38 seconds