Wall clock time and date at job start Mon Mar 8 2021 09:58:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42905 * 114.00078 * 2 1 4 4 C 1.52996 * 112.84897 * 294.12575 * 3 2 1 5 5 F 1.39899 * 109.46819 * 195.74378 * 4 3 2 6 6 F 1.39900 * 109.47037 * 315.74312 * 4 3 2 7 7 F 1.39899 * 109.47166 * 75.74633 * 4 3 2 8 8 C 1.53781 * 113.61192 * 162.81544 * 3 2 1 9 9 C 1.53775 * 87.08347 * 270.88343 * 8 3 2 10 10 H 1.09000 * 113.61852 * 220.01519 * 9 8 3 11 11 C 1.53000 * 113.61179 * 89.12141 * 9 8 3 12 12 S 1.81396 * 109.47520 * 87.50146 * 11 9 8 13 13 O 1.42102 * 110.54218 * 291.62481 * 12 11 9 14 14 O 1.42100 * 110.54201 * 68.37382 * 12 11 9 15 15 O 1.52195 * 104.45307 * 180.02562 * 12 11 9 16 16 C 1.35940 * 114.00402 * 74.99779 * 15 12 11 17 17 C 1.38730 * 119.98876 * 89.99769 * 16 15 12 18 18 C 1.50696 * 119.99178 * 359.97438 * 17 16 15 19 19 O 1.42898 * 109.47355 * 74.99820 * 18 17 16 20 20 Si 1.86297 * 109.46745 * 194.99763 * 18 17 16 21 21 C 1.38081 * 120.00872 * 179.97438 * 17 16 15 22 22 C 1.38815 * 119.99211 * 0.02562 * 21 17 16 23 23 N 1.40295 * 120.01165 * 179.97438 * 22 21 17 24 24 C 1.35196 * 126.05253 * 179.71224 * 23 22 21 25 25 C 1.35339 * 107.71632 * 179.89889 * 24 23 22 26 26 C 1.39892 * 107.93167 * 0.36811 * 25 24 23 27 27 N 1.30897 * 108.23831 * 359.77030 * 26 25 24 28 28 C 1.38858 * 119.97921 * 359.97438 * 22 21 17 29 29 C 1.38049 * 119.98382 * 359.72406 * 28 22 21 30 30 C 1.53773 * 87.08494 * 334.57128 * 9 8 3 31 31 H 1.08999 * 109.46498 * 63.09858 * 1 2 3 32 32 H 1.08996 * 109.46688 * 183.09090 * 1 2 3 33 33 H 1.08992 * 109.47095 * 303.09843 * 1 2 3 34 34 H 1.09000 * 113.61451 * 25.43785 * 8 3 2 35 35 H 1.09006 * 113.60977 * 156.25041 * 8 3 2 36 36 H 1.09002 * 109.47362 * 207.50078 * 11 9 8 37 37 H 1.09004 * 109.47449 * 327.49867 * 11 9 8 38 38 H 1.08998 * 109.47331 * 314.99303 * 18 17 16 39 39 H 0.96703 * 114.00042 * 299.99914 * 19 18 17 40 40 H 1.48501 * 110.00470 * 60.00166 * 20 18 17 41 41 H 1.48508 * 110.00055 * 181.31887 * 20 18 17 42 42 H 1.07998 * 120.00534 * 179.97438 * 21 17 16 43 43 H 1.08005 * 126.13746 * 0.03901 * 24 23 22 44 44 H 1.08000 * 126.03447 * 180.14052 * 25 24 23 45 45 H 1.08003 * 125.88113 * 179.75387 * 26 25 24 46 46 H 1.07997 * 120.00774 * 180.02562 * 28 22 21 47 47 H 1.07998 * 119.99266 * 180.27540 * 29 28 22 48 48 H 1.09005 * 113.61592 * 270.88594 * 30 9 8 49 49 H 1.08999 * 113.61902 * 139.98031 * 30 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 1.7255 2.0826 -1.2868 5 9 2.5970 3.1734 -1.3753 6 9 1.9150 1.2435 -2.3900 7 9 0.4040 2.5416 -1.2715 8 6 3.4906 1.3206 0.4163 9 6 3.0003 1.4809 1.8650 10 1 3.5980 2.1766 2.4539 11 6 2.7579 0.1505 2.5806 12 16 4.3013 -0.4123 3.3499 13 8 5.2488 -0.7789 2.3564 14 8 4.6620 0.4418 4.4267 15 8 3.9336 -1.7281 4.0206 16 6 3.7823 -2.7662 3.1561 17 6 4.8710 -3.5623 2.8311 18 6 6.2210 -3.2757 3.4362 19 8 6.2329 -3.7045 4.7993 20 14 7.5348 -4.1925 2.4854 21 6 4.7177 -4.6172 1.9534 22 6 3.4741 -4.8807 1.3957 23 7 3.3180 -5.9521 0.5035 24 6 2.1677 -6.3205 -0.1039 25 6 2.4388 -7.3933 -0.8832 26 6 3.7972 -7.6962 -0.7417 27 7 4.3250 -6.8332 0.0890 28 6 2.3847 -4.0836 1.7212 29 6 2.5376 -3.0330 2.6037 30 6 1.7234 2.1075 1.2804 31 1 -0.3632 0.4650 -0.9165 32 1 -0.3632 -1.0262 0.0554 33 1 -0.3633 0.5611 0.8608 34 1 4.0058 0.3781 0.2314 35 1 4.0405 2.1842 0.0420 36 1 1.9968 0.2847 3.3493 37 1 2.4189 -0.5935 1.8597 38 1 6.4199 -2.2050 3.3904 39 1 5.5727 -3.2677 5.3548 40 1 7.5329 -3.7556 1.0661 41 1 8.8675 -3.9436 3.0916 42 1 5.5653 -5.2366 1.7002 43 1 1.2058 -5.8429 0.0103 44 1 1.7306 -7.9243 -1.5019 45 1 4.3203 -8.5033 -1.2331 46 1 1.4169 -4.2885 1.2880 47 1 1.6895 -2.4157 2.8604 48 1 1.7898 3.1869 1.1436 49 1 0.8120 1.8001 1.7932 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_16951044_17541816.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:58:18 Heat of formation + Delta-G solvation = -165.154561 kcal Electronic energy + Delta-G solvation = -46077.807714 eV Core-core repulsion = 39882.017818 eV Total energy + Delta-G solvation = -6195.789897 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 449.104 amu Computer time = 1.98 seconds Orbital eigenvalues (eV) -51.28207 -48.82851 -48.71170 -42.94017 -42.32138 -41.72258 -39.63808 -38.45569 -37.81037 -37.61274 -37.30431 -34.42728 -33.30565 -31.98708 -31.38643 -29.99386 -28.69197 -28.01923 -27.24796 -27.09203 -25.28286 -24.03288 -23.73411 -22.65204 -21.93630 -21.42466 -20.87228 -20.11923 -19.75351 -19.57773 -19.50015 -19.36836 -18.88265 -18.59925 -18.09289 -17.52642 -17.10030 -16.88667 -16.72315 -16.50890 -16.36889 -16.03445 -15.81309 -15.68832 -15.63514 -15.52688 -15.43981 -15.38153 -15.18684 -15.04186 -14.99772 -14.89684 -14.83896 -14.62851 -14.50599 -14.29440 -14.04614 -13.97545 -13.86211 -13.57184 -13.56483 -13.40889 -13.37284 -13.30316 -13.25356 -13.05663 -12.64275 -12.49553 -12.34220 -11.99466 -11.86258 -11.72604 -11.50631 -11.41722 -11.21059 -11.04748 -10.48014 -10.29138 -9.34013 -4.82863 -1.36095 -0.58046 -0.30310 0.72509 0.86989 1.11991 1.36100 1.41378 1.69513 1.74880 1.80726 2.04754 2.11219 2.27196 2.36943 2.47485 2.63592 2.65558 2.87445 2.97106 2.99062 3.16844 3.19020 3.33938 3.38365 3.48168 3.49406 3.66484 3.70962 3.76332 3.87514 3.90980 3.91723 4.00411 4.04713 4.11895 4.14616 4.19722 4.24522 4.32491 4.35412 4.42514 4.43402 4.51769 4.52160 4.58791 4.59703 4.77831 4.78357 4.85837 5.12256 5.42234 5.47421 5.86467 6.45048 6.46275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.333 6.333 3 C 0.042 3.958 4 C 0.438 3.562 5 F -0.173 7.173 6 F -0.173 7.173 7 F -0.181 7.181 8 C -0.126 4.126 9 C -0.092 4.092 10 H 0.111 0.889 11 C -0.643 4.643 12 S 2.584 3.416 13 O -0.941 6.941 14 O -0.919 6.919 15 O -0.659 6.659 16 C 0.055 3.945 17 C -0.050 4.050 18 C -0.099 4.099 19 O -0.527 6.527 20 Si 0.746 3.254 21 C -0.099 4.099 22 C 0.198 3.802 23 N -0.332 5.332 24 C 0.053 3.947 25 C -0.252 4.252 26 C 0.067 3.933 27 N -0.285 5.285 28 C -0.123 4.123 29 C -0.090 4.090 30 C -0.136 4.136 31 H 0.055 0.945 32 H 0.102 0.898 33 H 0.056 0.944 34 H 0.109 0.891 35 H 0.126 0.874 36 H 0.147 0.853 37 H 0.153 0.847 38 H 0.090 0.910 39 H 0.368 0.632 40 H -0.241 1.241 41 H -0.247 1.247 42 H 0.160 0.840 43 H 0.181 0.819 44 H 0.159 0.841 45 H 0.195 0.805 46 H 0.151 0.849 47 H 0.153 0.847 48 H 0.114 0.886 49 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.539 -2.465 -1.492 8.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 O -0.250 6.250 3 C 0.000 4.000 4 C 0.383 3.617 5 F -0.155 7.155 6 F -0.154 7.154 7 F -0.162 7.162 8 C -0.163 4.163 9 C -0.112 4.112 10 H 0.129 0.871 11 C -0.769 4.769 12 S 2.680 3.320 13 O -0.939 6.939 14 O -0.917 6.917 15 O -0.618 6.618 16 C 0.013 3.987 17 C -0.053 4.053 18 C -0.206 4.206 19 O -0.332 6.332 20 Si 0.642 3.358 21 C -0.119 4.119 22 C 0.104 3.896 23 N -0.108 5.108 24 C -0.088 4.088 25 C -0.280 4.280 26 C -0.121 4.121 27 N -0.103 5.103 28 C -0.144 4.144 29 C -0.110 4.110 30 C -0.175 4.175 31 H 0.074 0.926 32 H 0.121 0.879 33 H 0.075 0.925 34 H 0.127 0.873 35 H 0.144 0.856 36 H 0.166 0.834 37 H 0.171 0.829 38 H 0.107 0.893 39 H 0.216 0.784 40 H -0.165 1.165 41 H -0.171 1.171 42 H 0.177 0.823 43 H 0.198 0.802 44 H 0.176 0.824 45 H 0.212 0.788 46 H 0.168 0.832 47 H 0.171 0.829 48 H 0.133 0.867 49 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -4.529 -2.520 -1.148 5.309 hybrid contribution -2.875 1.862 -0.398 3.449 sum -7.404 -0.658 -1.547 7.593 Atomic orbital electron populations 1.23171 0.79419 1.04353 1.01847 1.88040 1.21179 1.21952 1.93875 1.23927 0.99565 0.86390 0.90153 1.21103 0.74383 0.78763 0.87432 1.93189 1.69467 1.56245 1.96589 1.93229 1.94759 1.70905 1.56499 1.93195 1.36427 1.89749 1.96834 1.23489 0.91680 1.06999 0.94145 1.21704 0.99427 0.94117 0.95920 0.87134 1.30834 1.24239 1.07927 1.13875 1.05917 0.76972 0.74234 0.74876 1.93657 1.57983 1.79357 1.62950 1.93685 1.81045 1.64637 1.52298 1.85735 1.90345 1.33721 1.52029 1.17821 0.94733 0.90993 0.95195 1.20319 0.95967 0.93520 0.95504 1.25822 1.00612 1.05988 0.88221 1.86789 1.60921 1.68053 1.17483 0.93222 0.75481 0.89872 0.77178 1.20611 0.96930 0.97372 0.96949 1.17548 0.94700 0.86805 0.90557 1.45905 1.07457 1.22980 1.34435 1.22693 0.91811 0.98114 0.96204 1.21735 0.97259 1.01517 1.07468 1.24245 0.94265 0.97948 0.95663 1.77554 1.11714 1.03670 1.17361 1.20652 0.98476 0.95378 0.99930 1.21080 0.95664 0.98403 0.95886 1.23593 0.99209 1.01143 0.93531 0.92613 0.87939 0.92498 0.87271 0.85607 0.83440 0.82899 0.89268 0.78369 1.16521 1.17119 0.82278 0.80232 0.82385 0.78786 0.83182 0.82896 0.86735 0.88280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 10.33 101.05 1.04 1.02 16 2 O -0.33 0.58 8.36 -35.23 -0.29 0.28 16 3 C 0.04 -0.06 0.84 -89.81 -0.08 -0.14 16 4 C 0.44 0.12 2.52 37.16 0.09 0.21 16 5 F -0.17 -0.10 15.81 2.25 0.04 -0.06 16 6 F -0.17 -0.36 17.11 2.25 0.04 -0.32 16 7 F -0.18 -0.07 15.34 2.25 0.03 -0.03 16 8 C -0.13 0.21 6.89 -25.92 -0.18 0.03 16 9 C -0.09 0.25 3.84 -89.82 -0.35 -0.10 16 10 H 0.11 -0.40 8.13 -51.93 -0.42 -0.82 16 11 C -0.64 1.95 5.05 37.16 0.19 2.14 16 12 S 2.58 2.06 4.92 -107.50 -0.53 1.53 16 13 O -0.94 -2.65 14.23 -67.04 -0.95 -3.61 16 14 O -0.92 -3.73 18.09 -67.03 -1.21 -4.94 16 15 O -0.66 -0.25 9.03 -51.88 -0.47 -0.71 16 16 C 0.05 0.01 4.74 -39.21 -0.19 -0.17 16 17 C -0.05 -0.09 4.68 -104.50 -0.49 -0.58 16 18 C -0.10 -0.30 2.18 36.00 0.08 -0.22 16 19 O -0.53 -1.50 12.65 -35.23 -0.45 -1.95 16 20 Si 0.75 1.68 30.17 -169.99 -5.13 -3.45 16 21 C -0.10 -0.13 8.27 -39.43 -0.33 -0.45 16 22 C 0.20 0.03 6.69 -83.54 -0.56 -0.53 16 23 N -0.33 -0.19 3.80 -10.67 -0.04 -0.23 16 24 C 0.05 -0.09 10.80 -17.10 -0.18 -0.28 16 25 C -0.25 0.44 10.80 -40.00 -0.43 0.01 16 26 C 0.07 -0.04 12.03 -17.33 -0.21 -0.25 16 27 N -0.29 -0.50 11.87 30.64 0.36 -0.14 16 28 C -0.12 0.32 9.45 -39.42 -0.37 -0.05 16 29 C -0.09 0.23 8.46 -39.46 -0.33 -0.10 16 30 C -0.14 0.46 6.52 -25.92 -0.17 0.29 16 31 H 0.06 -0.14 6.56 -51.93 -0.34 -0.48 16 32 H 0.10 -0.57 8.14 -51.93 -0.42 -0.99 16 33 H 0.06 -0.28 6.60 -51.93 -0.34 -0.62 16 34 H 0.11 -0.12 8.10 -51.93 -0.42 -0.54 16 35 H 0.13 -0.34 7.03 -51.93 -0.36 -0.71 16 36 H 0.15 -0.85 8.14 -51.92 -0.42 -1.27 16 37 H 0.15 -0.59 4.60 -51.92 -0.24 -0.83 16 38 H 0.09 0.33 5.42 -51.93 -0.28 0.05 16 39 H 0.37 0.21 8.60 45.56 0.39 0.61 16 40 H -0.24 -0.87 7.11 56.52 0.40 -0.47 16 41 H -0.25 -1.07 7.11 56.52 0.40 -0.67 16 42 H 0.16 0.14 4.76 -52.49 -0.25 -0.11 16 43 H 0.18 -0.99 7.04 -52.48 -0.37 -1.36 16 44 H 0.16 -0.62 8.06 -52.49 -0.42 -1.05 16 45 H 0.20 -0.72 8.06 -52.48 -0.42 -1.14 16 46 H 0.15 -0.88 6.74 -52.49 -0.35 -1.23 16 47 H 0.15 -0.93 7.52 -52.49 -0.39 -1.32 16 48 H 0.11 -0.47 8.04 -51.93 -0.42 -0.89 16 49 H 0.10 -0.47 6.64 -51.93 -0.34 -0.81 16 LS Contribution 417.87 15.07 6.30 6.30 Total: 0.00 -11.38 417.87 -9.80 -21.18 By element: Atomic # 1 Polarization: -9.64 SS G_CDS: -5.04 Total: -14.68 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: -2.46 Total: 0.83 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: 0.32 Total: -0.37 kcal Atomic # 8 Polarization: -7.55 SS G_CDS: -3.38 Total: -10.93 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.11 Total: -0.41 kcal Atomic # 14 Polarization: 1.68 SS G_CDS: -5.13 Total: -3.45 kcal Atomic # 16 Polarization: 2.06 SS G_CDS: -0.53 Total: 1.53 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -11.38 -9.80 -21.18 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_16951044_17541816.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.976 kcal (2) G-P(sol) polarization free energy of solvation -11.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -155.357 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.798 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.179 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.98 seconds