Wall clock time and date at job start Mon Mar 8 2021 10:10:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 H 1.00901 * 109.46729 * 2 1 4 4 C 1.46893 * 109.47283 * 119.99563 * 2 1 3 5 5 C 1.46900 * 109.47238 * 240.00264 * 2 1 3 6 6 C 1.53004 * 109.47258 * 66.05522 * 5 2 1 7 7 H 1.09000 * 109.46790 * 304.72317 * 6 5 2 8 8 C 1.53002 * 109.46997 * 64.71800 * 6 5 2 9 9 C 1.53001 * 109.47178 * 180.02562 * 8 6 5 10 10 C 1.53004 * 109.46775 * 299.99603 * 9 8 6 11 11 H 1.08994 * 109.47045 * 180.02562 * 10 9 8 12 12 N 1.46496 * 109.47295 * 300.00416 * 10 9 8 13 13 S 1.65600 * 119.99914 * 215.05454 * 12 10 9 14 14 O 1.42092 * 106.40366 * 178.75254 * 13 12 10 15 15 O 1.42097 * 106.40305 * 311.67638 * 13 12 10 16 16 C 1.76202 * 107.21995 * 65.21338 * 13 12 10 17 17 C 1.38215 * 119.99821 * 63.43341 * 16 13 12 18 18 C 1.50702 * 120.00070 * 0.02562 * 17 16 13 19 19 O 1.42891 * 109.47272 * 75.71301 * 18 17 16 20 20 Si 1.86307 * 109.47069 * 195.71458 * 18 17 16 21 21 C 1.38262 * 119.99770 * 179.74720 * 17 16 13 22 22 C 1.38207 * 120.00062 * 0.53060 * 21 17 16 23 23 C 1.38264 * 119.99973 * 359.74595 * 22 21 17 24 24 C 1.38209 * 120.00079 * 359.97438 * 23 22 21 25 25 C 1.53002 * 109.46944 * 60.00254 * 10 9 8 26 26 C 1.52994 * 109.47158 * 184.71511 * 6 5 2 27 27 H 1.09000 * 109.46953 * 174.48097 * 1 2 3 28 28 H 1.08997 * 109.47484 * 294.47752 * 1 2 3 29 29 H 1.09001 * 109.47364 * 54.47926 * 1 2 3 30 30 H 1.09001 * 109.47400 * 180.02562 * 4 2 1 31 31 H 1.08997 * 109.47934 * 300.00628 * 4 2 1 32 32 H 1.09007 * 109.47045 * 60.00671 * 4 2 1 33 33 H 1.08991 * 109.47019 * 306.05550 * 5 2 1 34 34 H 1.08996 * 109.46784 * 186.05499 * 5 2 1 35 35 H 1.09004 * 109.47040 * 59.99858 * 8 6 5 36 36 H 1.09003 * 109.47000 * 300.00198 * 8 6 5 37 37 H 1.09002 * 109.47164 * 180.02562 * 9 8 6 38 38 H 1.08996 * 109.47190 * 59.99832 * 9 8 6 39 39 H 0.96995 * 120.00366 * 35.05377 * 12 10 9 40 40 H 1.09003 * 109.47014 * 315.71148 * 18 17 16 41 41 H 0.96700 * 114.00384 * 184.97074 * 19 18 17 42 42 H 1.48498 * 109.99652 * 178.68026 * 20 18 17 43 43 H 1.48494 * 109.99650 * 300.00032 * 20 18 17 44 44 H 1.07998 * 119.99720 * 180.30179 * 21 17 16 45 45 H 1.07997 * 120.00354 * 179.76909 * 22 21 17 46 46 H 1.07993 * 119.99938 * 179.97438 * 23 22 21 47 47 H 1.08001 * 120.00105 * 179.97438 * 24 23 22 48 48 H 1.08996 * 109.47197 * 59.99663 * 25 10 9 49 49 H 1.09002 * 109.47547 * 180.02562 * 25 10 9 50 50 H 1.08996 * 109.47438 * 300.00079 * 26 6 5 51 51 H 1.09006 * 109.47067 * 60.00452 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6924 1.1994 5 6 1.9587 -0.6924 -1.1995 6 6 1.5767 0.1114 -2.4441 7 1 0.4996 0.2780 -2.4525 8 6 2.3011 1.4589 -2.4231 9 6 1.9187 2.2629 -3.6673 10 6 2.3240 1.4855 -4.9213 11 1 2.0521 2.0585 -5.8077 12 7 3.7717 1.2615 -4.9104 13 16 4.6224 1.2750 -6.3311 14 8 5.9839 1.0604 -5.9857 15 8 3.9089 0.4414 -7.2340 16 6 4.5258 2.9098 -6.9814 17 6 5.0797 3.9655 -6.2822 18 6 5.7668 3.7183 -4.9639 19 8 7.0500 3.1347 -5.1975 20 14 5.9747 5.3338 -4.0594 21 6 5.0085 5.2475 -6.7949 22 6 4.3739 5.4750 -8.0014 23 6 3.8147 4.4197 -8.6981 24 6 3.8909 3.1373 -8.1884 25 6 1.5996 0.1380 -4.9423 26 6 1.9824 -0.6662 -3.6977 27 1 -0.3633 -1.0229 -0.0988 28 1 -0.3634 0.4258 0.9353 29 1 -0.3634 0.5971 -0.8364 30 1 3.0487 -0.6920 1.1997 31 1 1.5953 -0.1786 2.0894 32 1 1.5954 -1.7201 1.1994 33 1 1.5096 -1.6839 -1.2553 34 1 3.0432 -0.7872 -1.1468 35 1 3.3783 1.2922 -2.4146 36 1 2.0122 2.0128 -1.5299 37 1 2.4352 3.2227 -3.6526 38 1 0.8416 2.4295 -3.6754 39 1 4.2320 1.1053 -4.0710 40 1 5.1632 3.0396 -4.3612 41 1 7.5182 2.8782 -4.3913 42 1 6.6224 5.0995 -2.7438 43 1 6.7959 6.2679 -4.8707 44 1 5.4457 6.0717 -6.2509 45 1 4.3150 6.4769 -8.4002 46 1 3.3184 4.5975 -9.6407 47 1 3.4538 2.3131 -8.7324 48 1 0.5225 0.3047 -4.9504 49 1 1.8886 -0.4161 -5.8354 50 1 3.0595 -0.8328 -3.6892 51 1 1.4663 -1.6262 -3.7127 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_17509452_2726874.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:10:33 Heat of formation + Delta-G solvation = 58.328357 kcal Electronic energy + Delta-G solvation = -32495.275106 eV Core-core repulsion = 28414.849911 eV Total energy + Delta-G solvation = -4080.425195 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.173 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -44.58152 -41.58595 -41.38648 -39.22838 -38.33372 -37.62020 -36.77909 -33.82929 -33.51980 -33.20590 -33.04457 -31.94424 -29.85376 -27.87662 -27.74737 -25.35309 -25.22064 -24.47168 -23.50681 -22.59340 -21.76295 -21.39845 -20.07770 -19.99863 -19.69689 -19.50473 -19.32869 -18.50895 -18.00588 -17.70594 -17.53091 -17.18116 -16.91651 -16.67153 -16.54707 -16.40962 -16.28120 -15.97554 -15.96900 -15.89791 -15.84422 -15.69113 -15.21292 -14.93875 -14.89313 -14.80135 -14.72090 -14.66598 -14.33612 -14.00319 -13.93685 -13.83491 -13.73357 -13.67670 -13.33214 -13.15541 -13.04731 -12.85432 -12.78936 -12.45313 -11.79107 -11.34360 -11.25255 -10.87217 -5.94134 -1.53524 -1.48773 -1.07726 -0.68120 0.24132 0.46056 0.51948 0.63079 0.67926 0.96859 1.07840 1.32731 1.41154 1.55044 1.63979 1.71302 1.78549 1.81462 1.85759 1.95724 2.14125 2.16891 2.23292 2.27991 2.29907 2.32697 2.44597 2.54667 2.59546 2.66847 2.74633 2.78153 2.81722 2.86952 2.94142 3.03279 3.12457 3.18243 3.23219 3.38103 3.41945 3.46933 3.50758 3.61594 3.68106 3.76514 3.90740 3.95138 4.01591 4.16827 4.34638 4.49619 4.73747 4.91304 5.62332 Molecular weight = 356.17amu Principal moments of inertia in cm(-1) A = 0.012694 B = 0.003953 C = 0.003558 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2205.190562 B = 7081.757009 C = 7866.735657 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 N -0.389 5.389 3 H 0.424 0.576 4 C -0.048 4.048 5 C -0.010 4.010 6 C -0.117 4.117 7 H 0.099 0.901 8 C -0.132 4.132 9 C -0.126 4.126 10 C 0.152 3.848 11 H 0.095 0.905 12 N -1.116 6.116 13 S 2.686 3.314 14 O -0.928 6.928 15 O -0.954 6.954 16 C -0.659 4.659 17 C 0.026 3.974 18 C -0.103 4.103 19 O -0.501 6.501 20 Si 0.685 3.315 21 C -0.137 4.137 22 C -0.054 4.054 23 C -0.130 4.130 24 C -0.023 4.023 25 C -0.141 4.141 26 C -0.111 4.111 27 H 0.123 0.877 28 H 0.124 0.876 29 H 0.124 0.876 30 H 0.123 0.877 31 H 0.124 0.876 32 H 0.123 0.877 33 H 0.132 0.868 34 H 0.131 0.869 35 H 0.078 0.922 36 H 0.063 0.937 37 H 0.086 0.914 38 H 0.086 0.914 39 H 0.412 0.588 40 H 0.070 0.930 41 H 0.382 0.618 42 H -0.256 1.256 43 H -0.249 1.249 44 H 0.137 0.863 45 H 0.139 0.861 46 H 0.139 0.861 47 H 0.147 0.853 48 H 0.081 0.919 49 H 0.092 0.908 50 H 0.075 0.925 51 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.769 -5.894 23.968 29.290 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 N 0.035 4.965 3 H 0.260 0.740 4 C -0.190 4.190 5 C -0.132 4.132 6 C -0.136 4.136 7 H 0.117 0.883 8 C -0.170 4.170 9 C -0.165 4.165 10 C 0.045 3.955 11 H 0.113 0.887 12 N -0.876 5.876 13 S 2.775 3.225 14 O -0.918 6.918 15 O -0.943 6.943 16 C -0.746 4.746 17 C 0.025 3.975 18 C -0.213 4.213 19 O -0.308 6.308 20 Si 0.585 3.415 21 C -0.155 4.155 22 C -0.072 4.072 23 C -0.149 4.149 24 C -0.043 4.043 25 C -0.180 4.180 26 C -0.149 4.149 27 H 0.142 0.858 28 H 0.143 0.857 29 H 0.143 0.857 30 H 0.142 0.858 31 H 0.143 0.857 32 H 0.141 0.859 33 H 0.150 0.850 34 H 0.149 0.851 35 H 0.097 0.903 36 H 0.082 0.918 37 H 0.105 0.895 38 H 0.104 0.896 39 H 0.248 0.752 40 H 0.087 0.913 41 H 0.231 0.769 42 H -0.181 1.181 43 H -0.173 1.173 44 H 0.155 0.845 45 H 0.157 0.843 46 H 0.157 0.843 47 H 0.164 0.836 48 H 0.100 0.900 49 H 0.110 0.890 50 H 0.094 0.906 51 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -15.117 -6.161 23.164 28.339 hybrid contribution 1.104 0.220 0.428 1.204 sum -14.013 -5.941 23.592 28.076 Atomic orbital electron populations 1.24184 0.75912 1.09777 1.09521 1.45128 1.16467 1.19140 1.15795 0.73966 1.24148 1.05679 1.02561 0.86619 1.24215 1.05386 1.00014 0.83535 1.21858 1.02673 0.95707 0.93334 0.88298 1.21818 1.01429 0.94440 0.99275 1.21816 1.03038 0.99104 0.92528 1.20800 0.78837 0.96229 0.99683 0.88684 1.55953 1.16878 1.89221 1.25591 1.02343 0.73453 0.73810 0.72907 1.93707 1.31301 1.84366 1.82414 1.93607 1.74182 1.63545 1.63012 1.30682 1.13632 1.22918 1.07345 1.18778 0.92577 0.92806 0.93333 1.25139 0.88194 1.09327 0.98616 1.86814 1.28413 1.80297 1.35246 0.95537 0.91141 0.76622 0.78248 1.21288 1.00598 0.96449 0.97183 1.21550 0.92470 1.00049 0.93152 1.21463 1.00213 0.92534 1.00699 1.21085 0.92515 0.98415 0.92256 1.22092 1.00930 0.95977 0.98975 1.21483 1.02793 0.98599 0.92021 0.85849 0.85735 0.85737 0.85848 0.85718 0.85888 0.84968 0.85095 0.90299 0.91838 0.89515 0.89592 0.75219 0.91264 0.76941 1.18097 1.17335 0.84536 0.84336 0.84300 0.83554 0.90049 0.88964 0.90593 0.90389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.66 8.88 60.06 0.53 2.19 16 2 N -0.39 12.81 0.66 -251.27 -0.16 12.64 16 3 H 0.42 -14.52 6.57 -39.29 -0.26 -14.77 16 4 C -0.05 1.54 9.18 60.06 0.55 2.09 16 5 C -0.01 0.31 4.12 -3.82 -0.02 0.29 16 6 C -0.12 3.15 2.08 -90.62 -0.19 2.96 16 7 H 0.10 -2.75 6.34 -51.93 -0.33 -3.08 16 8 C -0.13 3.41 4.77 -26.73 -0.13 3.28 16 9 C -0.13 2.76 5.63 -26.73 -0.15 2.61 16 10 C 0.15 -2.76 2.98 -67.93 -0.20 -2.97 16 11 H 0.10 -1.61 7.86 -51.93 -0.41 -2.02 16 12 N -1.12 18.27 3.46 -4.89 -0.02 18.25 16 13 S 2.69 -26.38 4.90 -107.50 -0.53 -26.90 16 14 O -0.93 5.86 15.04 -66.40 -1.00 4.86 16 15 O -0.95 6.64 16.23 -57.18 -0.93 5.71 16 16 C -0.66 5.94 5.75 -39.58 -0.23 5.71 16 17 C 0.03 -0.25 5.28 -104.62 -0.55 -0.80 16 18 C -0.10 1.15 1.84 36.01 0.07 1.22 16 19 O -0.50 3.99 10.46 -57.70 -0.60 3.38 16 20 Si 0.68 -8.10 30.31 -169.99 -5.15 -13.25 16 21 C -0.14 1.28 8.66 -39.58 -0.34 0.93 16 22 C -0.05 0.52 10.05 -39.58 -0.40 0.13 16 23 C -0.13 1.24 10.05 -39.58 -0.40 0.84 16 24 C -0.02 0.21 9.55 -39.58 -0.38 -0.17 16 25 C -0.14 2.58 5.64 -26.70 -0.15 2.43 16 26 C -0.11 2.43 5.05 -26.71 -0.13 2.29 16 27 H 0.12 -3.87 8.00 -51.93 -0.42 -4.29 16 28 H 0.12 -3.97 8.08 -51.93 -0.42 -4.39 16 29 H 0.12 -3.94 6.50 -51.93 -0.34 -4.28 16 30 H 0.12 -3.91 8.10 -51.93 -0.42 -4.33 16 31 H 0.12 -3.98 8.11 -51.93 -0.42 -4.40 16 32 H 0.12 -3.86 8.14 -51.92 -0.42 -4.28 16 33 H 0.13 -4.02 7.99 -51.93 -0.42 -4.44 16 34 H 0.13 -4.01 8.07 -51.93 -0.42 -4.43 16 35 H 0.08 -2.01 6.51 -51.93 -0.34 -2.35 16 36 H 0.06 -1.82 6.60 -51.93 -0.34 -2.16 16 37 H 0.09 -1.84 8.14 -51.93 -0.42 -2.27 16 38 H 0.09 -1.92 8.14 -51.93 -0.42 -2.34 16 39 H 0.41 -7.91 6.45 -34.47 -0.22 -8.13 16 40 H 0.07 -1.06 5.76 -51.93 -0.30 -1.36 16 41 H 0.38 -4.54 8.86 45.56 0.40 -4.14 16 42 H -0.26 2.63 7.11 56.52 0.40 3.03 16 43 H -0.25 1.89 6.71 56.52 0.38 2.27 16 44 H 0.14 -1.43 4.91 -52.49 -0.26 -1.68 16 45 H 0.14 -1.61 8.06 -52.49 -0.42 -2.04 16 46 H 0.14 -1.56 8.06 -52.49 -0.42 -1.98 16 47 H 0.15 -1.41 7.34 -52.49 -0.39 -1.80 16 48 H 0.08 -1.57 8.14 -51.93 -0.42 -1.99 16 49 H 0.09 -1.35 7.64 -51.93 -0.40 -1.75 16 50 H 0.08 -1.59 7.44 -51.93 -0.39 -1.98 16 51 H 0.08 -1.68 8.14 -51.93 -0.42 -2.11 16 LS Contribution 388.35 15.07 5.85 5.85 Total: 1.00 -41.00 388.35 -12.90 -53.90 By element: Atomic # 1 Polarization: -79.25 SS G_CDS: -8.25 Total: -87.50 kcal Atomic # 6 Polarization: 25.17 SS G_CDS: -2.12 Total: 23.05 kcal Atomic # 7 Polarization: 31.08 SS G_CDS: -0.18 Total: 30.90 kcal Atomic # 8 Polarization: 16.48 SS G_CDS: -2.53 Total: 13.95 kcal Atomic # 14 Polarization: -8.10 SS G_CDS: -5.15 Total: -13.25 kcal Atomic # 16 Polarization: -26.38 SS G_CDS: -0.53 Total: -26.90 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -41.00 -12.90 -53.90 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_17509452_2726874.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 112.228 kcal (2) G-P(sol) polarization free energy of solvation -40.997 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.232 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.903 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.900 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.328 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.82 seconds