Wall clock time and date at job start Mon Mar 8 2021 12:20:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.47015 * 2 1 4 4 C 1.50705 * 109.47355 * 240.00288 * 2 1 3 5 5 C 1.38208 * 119.99556 * 284.34029 * 4 2 1 6 6 S 1.76204 * 120.00215 * 0.02562 * 5 4 2 7 7 O 1.42104 * 106.40044 * 311.11655 * 6 5 4 8 8 O 1.42100 * 106.40211 * 178.19504 * 6 5 4 9 9 N 1.65593 * 107.21826 * 64.65794 * 6 5 4 10 10 C 1.46499 * 120.00530 * 64.54388 * 9 6 5 11 11 C 1.52995 * 109.47815 * 163.94644 * 10 9 6 12 12 H 1.09000 * 112.90460 * 316.25285 * 11 10 9 13 13 C 1.53950 * 113.53871 * 87.50071 * 11 10 9 14 14 C 1.53786 * 87.01991 * 89.19360 * 13 11 10 15 15 O 1.42900 * 113.61297 * 270.77708 * 14 13 11 16 16 C 1.52993 * 113.61466 * 139.94906 * 14 13 11 17 17 F 1.39905 * 109.47184 * 200.86441 * 16 14 13 18 18 F 1.39897 * 109.47667 * 320.86407 * 16 14 13 19 19 F 1.39907 * 109.47023 * 80.86987 * 16 14 13 20 20 C 1.53774 * 113.61792 * 185.00347 * 11 10 9 21 21 C 1.38260 * 119.99795 * 180.27583 * 5 4 2 22 22 C 1.38211 * 119.99722 * 359.46897 * 21 5 4 23 23 C 1.38252 * 119.99982 * 0.53294 * 22 21 5 24 24 C 1.38214 * 120.00326 * 359.74066 * 23 22 21 25 25 H 0.96705 * 113.99631 * 60.00017 * 1 2 3 26 26 H 1.09000 * 109.47011 * 119.99735 * 2 1 3 27 27 H 1.48504 * 110.00097 * 59.99782 * 3 2 1 28 28 H 1.48501 * 110.00216 * 181.31900 * 3 2 1 29 29 H 0.97002 * 120.00089 * 244.54692 * 9 6 5 30 30 H 1.09000 * 109.46554 * 43.94386 * 10 9 6 31 31 H 1.09005 * 109.47109 * 283.95049 * 10 9 6 32 32 H 1.09000 * 113.66810 * 334.66888 * 13 11 10 33 33 H 1.09000 * 113.61709 * 203.70945 * 13 11 10 34 34 H 0.96705 * 113.99604 * 279.12743 * 15 14 13 35 35 H 1.09005 * 113.61506 * 156.33506 * 20 11 10 36 36 H 1.09000 * 113.61881 * 25.42901 * 20 11 10 37 37 H 1.07997 * 120.00051 * 179.72611 * 21 5 4 38 38 H 1.08007 * 119.99677 * 180.29405 * 22 21 5 39 39 H 1.08005 * 120.00039 * 179.76799 * 23 22 21 40 40 H 1.07997 * 120.00281 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.8823 -2.0898 -1.3005 6 16 1.2316 -3.0178 0.0487 7 8 1.8670 -2.5230 1.2195 8 8 1.2787 -4.3828 -0.3435 9 7 -0.3714 -2.6258 0.1854 10 6 -1.3030 -2.9640 -0.8935 11 6 -2.7394 -2.8706 -0.3753 12 1 -2.8649 -3.3192 0.6101 13 6 -3.3453 -1.4603 -0.4938 14 6 -3.8231 -1.8707 -1.8968 15 8 -2.8710 -1.6002 -2.9275 16 6 -5.2271 -1.3676 -2.2377 17 9 -5.7628 -2.1442 -3.2707 18 9 -6.0454 -1.4669 -1.1073 19 9 -5.1571 -0.0315 -2.6469 20 6 -3.7941 -3.3251 -1.3979 21 6 2.3484 -2.7418 -2.4270 22 6 2.8534 -2.0136 -3.4876 23 6 2.9026 -0.6337 -3.4176 24 6 2.4418 0.0178 -2.2891 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8900 27 1 1.5614 2.4679 1.2085 28 1 3.5346 1.7704 -0.0321 29 1 -0.6937 -2.1721 0.9799 30 1 -1.1064 -3.9791 -1.2383 31 1 -1.1692 -2.2670 -1.7209 32 1 -2.6014 -0.6637 -0.5016 33 1 -4.1589 -1.2742 0.2073 34 1 -2.8684 -0.6814 -3.2292 35 1 -4.7306 -3.6499 -0.9443 36 1 -3.4120 -4.0319 -2.1345 37 1 2.3141 -3.8200 -2.4799 38 1 3.2132 -2.5228 -4.3696 39 1 3.3007 -0.0649 -4.2448 40 1 2.4799 1.0958 -2.2345 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_17664670_2726874.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:20:18 Heat of formation + Delta-G solvation = -236.615505 kcal Electronic energy + Delta-G solvation = -33686.401353 eV Core-core repulsion = 28567.374439 eV Total energy + Delta-G solvation = -5119.026913 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.078 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -51.21431 -48.76735 -48.66854 -41.28392 -40.77846 -38.43086 -37.66232 -36.87191 -36.81973 -35.14898 -32.91906 -32.47753 -29.70988 -27.28878 -27.05530 -26.60152 -24.49245 -23.51925 -22.87542 -20.91769 -20.48536 -20.07474 -19.52502 -19.38742 -19.24579 -18.29673 -18.11609 -17.56157 -17.25258 -16.96079 -16.54224 -16.29644 -16.05360 -15.85488 -15.67299 -15.54677 -15.53343 -15.14251 -15.10433 -15.10209 -14.86161 -14.81269 -14.61145 -14.48584 -14.24219 -13.97201 -13.80491 -13.64642 -13.22596 -13.16928 -13.04490 -13.02704 -12.84108 -12.53754 -12.37060 -12.17492 -12.10710 -11.75048 -11.57991 -11.25033 -10.67536 -10.54993 -10.38811 -10.14638 -5.15651 -0.61104 -0.32452 0.03875 1.11174 1.49765 1.55662 1.90611 1.93778 2.27384 2.31537 2.54556 2.61331 2.72184 2.83752 3.22657 3.26029 3.28257 3.35138 3.42313 3.48013 3.66632 3.72773 3.80074 4.08188 4.12114 4.25075 4.33157 4.33862 4.42094 4.48212 4.49209 4.60902 4.64321 4.69770 4.77885 4.85662 4.93732 5.02034 5.09164 5.17265 5.62418 6.00282 6.06041 6.30077 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.123 4.123 3 Si 0.695 3.305 4 C -0.014 4.014 5 C -0.657 4.657 6 S 2.699 3.301 7 O -0.960 6.960 8 O -0.960 6.960 9 N -1.098 6.098 10 C 0.134 3.866 11 C -0.103 4.103 12 H 0.101 0.899 13 C -0.152 4.152 14 C 0.062 3.938 15 O -0.508 6.508 16 C 0.432 3.568 17 F -0.176 7.176 18 F -0.175 7.175 19 F -0.184 7.184 20 C -0.113 4.113 21 C -0.020 4.020 22 C -0.133 4.133 23 C -0.057 4.057 24 C -0.136 4.136 25 H 0.377 0.623 26 H 0.149 0.851 27 H -0.248 1.248 28 H -0.256 1.256 29 H 0.423 0.577 30 H 0.081 0.919 31 H 0.085 0.915 32 H 0.100 0.900 33 H 0.106 0.894 34 H 0.390 0.610 35 H 0.112 0.888 36 H 0.099 0.901 37 H 0.145 0.855 38 H 0.136 0.864 39 H 0.136 0.864 40 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.265 3.815 -4.172 5.794 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.233 4.233 3 Si 0.595 3.405 4 C -0.016 4.016 5 C -0.744 4.744 6 S 2.788 3.212 7 O -0.951 6.951 8 O -0.949 6.949 9 N -0.859 5.859 10 C 0.008 3.992 11 C -0.122 4.122 12 H 0.119 0.881 13 C -0.189 4.189 14 C 0.018 3.982 15 O -0.315 6.315 16 C 0.377 3.623 17 F -0.157 7.157 18 F -0.157 7.157 19 F -0.165 7.165 20 C -0.151 4.151 21 C -0.039 4.039 22 C -0.152 4.152 23 C -0.075 4.075 24 C -0.154 4.154 25 H 0.224 0.776 26 H 0.166 0.834 27 H -0.173 1.173 28 H -0.180 1.180 29 H 0.260 0.740 30 H 0.099 0.901 31 H 0.103 0.897 32 H 0.118 0.882 33 H 0.124 0.876 34 H 0.240 0.760 35 H 0.130 0.870 36 H 0.117 0.883 37 H 0.163 0.837 38 H 0.154 0.846 39 H 0.154 0.846 40 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -0.064 2.812 -2.779 3.954 hybrid contribution -0.439 0.883 -0.486 1.099 sum -0.503 3.695 -3.265 4.956 Atomic orbital electron populations 1.86554 1.15925 1.81485 1.49157 1.25830 0.86088 1.12685 0.98650 0.95101 0.81531 0.76375 0.87452 1.19946 0.94097 0.92143 0.95430 1.30794 1.18104 1.06334 1.19139 1.01703 0.72535 0.73511 0.73437 1.93556 1.74195 1.81129 1.46171 1.93589 1.86161 1.31373 1.83822 1.55194 1.24902 1.76704 1.29144 1.21183 0.87173 1.01799 0.89026 1.22343 0.93371 0.96224 1.00309 0.88090 1.23829 1.02331 0.99156 0.93588 1.23690 0.83258 1.00937 0.90313 1.86627 1.55915 1.34663 1.54297 1.21350 0.90455 0.75631 0.74842 1.93229 1.88138 1.74677 1.59689 1.93190 1.75232 1.95824 1.51416 1.93186 1.96606 1.36031 1.90707 1.23173 1.01062 0.92377 0.98454 1.21087 0.91293 1.00824 0.90721 1.21404 1.00267 0.94349 0.99199 1.21499 0.94049 0.94829 0.97162 1.21133 1.00808 0.99558 0.93930 0.77563 0.83374 1.17310 1.18013 0.74029 0.90089 0.89726 0.88152 0.87584 0.75993 0.87011 0.88286 0.83690 0.84591 0.84596 0.84545 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.81 10.61 -35.23 -0.37 1.44 16 2 C -0.12 0.13 2.03 36.01 0.07 0.20 16 3 Si 0.69 -1.29 29.93 -169.99 -5.09 -6.37 16 4 C -0.01 0.01 5.25 -104.62 -0.55 -0.54 16 5 C -0.66 -0.40 5.87 -39.58 -0.23 -0.63 16 6 S 2.70 5.14 5.07 -107.50 -0.55 4.59 16 7 O -0.96 -4.55 15.50 -57.17 -0.89 -5.43 16 8 O -0.96 -4.39 16.44 -57.17 -0.94 -5.33 16 9 N -1.10 1.54 4.27 -10.61 -0.05 1.50 16 10 C 0.13 -0.32 5.81 -4.04 -0.02 -0.34 16 11 C -0.10 0.36 3.98 -89.72 -0.36 0.00 16 12 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 13 C -0.15 0.63 6.92 -25.83 -0.18 0.45 16 14 C 0.06 -0.19 1.33 -89.80 -0.12 -0.31 16 15 O -0.51 1.80 11.44 -35.23 -0.40 1.40 16 16 C 0.43 -0.43 2.83 37.15 0.11 -0.32 16 17 F -0.18 -0.17 17.20 2.25 0.04 -0.13 16 18 F -0.18 0.04 15.74 2.25 0.04 0.08 16 19 F -0.18 0.13 16.72 2.25 0.04 0.17 16 20 C -0.11 0.35 6.88 -25.92 -0.18 0.17 16 21 C -0.02 0.00 9.55 -39.58 -0.38 -0.38 16 22 C -0.13 0.20 10.05 -39.59 -0.40 -0.20 16 23 C -0.06 0.14 10.05 -39.58 -0.40 -0.26 16 24 C -0.14 0.30 8.66 -39.58 -0.34 -0.04 16 25 H 0.38 -2.74 8.70 45.56 0.40 -2.34 16 26 H 0.15 0.20 5.36 -51.93 -0.28 -0.08 16 27 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 28 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 29 H 0.42 -1.01 8.18 -34.47 -0.28 -1.29 16 30 H 0.08 -0.13 7.74 -51.93 -0.40 -0.53 16 31 H 0.08 -0.27 6.12 -51.93 -0.32 -0.58 16 32 H 0.10 -0.52 8.10 -51.93 -0.42 -0.94 16 33 H 0.11 -0.43 7.18 -51.93 -0.37 -0.80 16 34 H 0.39 -2.52 8.50 45.56 0.39 -2.14 16 35 H 0.11 -0.41 7.83 -51.93 -0.41 -0.82 16 36 H 0.10 -0.28 8.10 -51.93 -0.42 -0.70 16 37 H 0.15 -0.06 7.34 -52.49 -0.39 -0.44 16 38 H 0.14 -0.47 8.06 -52.48 -0.42 -0.90 16 39 H 0.14 -0.66 8.06 -52.48 -0.42 -1.08 16 40 H 0.14 -0.66 5.15 -52.49 -0.27 -0.93 16 LS Contribution 348.91 15.07 5.26 5.26 Total: 0.00 -10.12 348.91 -9.13 -19.24 By element: Atomic # 1 Polarization: -10.97 SS G_CDS: -3.24 Total: -14.21 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -2.98 Total: -2.20 kcal Atomic # 7 Polarization: 1.54 SS G_CDS: -0.05 Total: 1.50 kcal Atomic # 8 Polarization: -5.32 SS G_CDS: -2.60 Total: -7.92 kcal Atomic # 9 Polarization: 0.00 SS G_CDS: 0.11 Total: 0.11 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.09 Total: -6.37 kcal Atomic # 16 Polarization: 5.14 SS G_CDS: -0.55 Total: 4.59 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -10.12 -9.13 -19.24 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_17664670_2726874.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -217.373 kcal (2) G-P(sol) polarization free energy of solvation -10.116 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.126 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.242 kcal (6) G-S(sol) free energy of system = (1) + (5) -236.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds