Wall clock time and date at job start Mon Mar 8 2021 09:54:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45200 * 109.47542 * 2 1 4 4 C 1.34234 * 117.00236 * 179.97438 * 3 2 1 5 5 O 1.20826 * 119.99559 * 0.02562 * 4 3 2 6 6 C 1.50703 * 119.99794 * 180.02562 * 4 3 2 7 7 H 1.08997 * 109.47023 * 300.00035 * 6 4 3 8 8 C 1.52997 * 109.46981 * 60.00422 * 6 4 3 9 9 C 1.52997 * 109.46931 * 179.97438 * 8 6 4 10 10 C 1.53001 * 109.46968 * 299.99801 * 9 8 6 11 11 F 1.39894 * 109.47381 * 300.00185 * 10 9 8 12 12 C 1.53006 * 109.47088 * 180.02562 * 10 9 8 13 13 S 1.81393 * 109.47078 * 60.00113 * 12 10 9 14 14 O 1.42108 * 110.54450 * 68.37491 * 13 12 10 15 15 O 1.42104 * 110.54547 * 291.62485 * 13 12 10 16 16 O 1.52195 * 104.44987 * 180.02562 * 13 12 10 17 17 C 1.35908 * 114.00216 * 75.00054 * 16 13 12 18 18 C 1.38687 * 120.04826 * 270.02325 * 17 16 13 19 19 C 1.38259 * 119.93108 * 179.97438 * 18 17 16 20 20 Br 1.89106 * 119.97799 * 179.97438 * 19 18 17 21 21 C 1.38333 * 120.03732 * 359.97438 * 19 18 17 22 22 C 1.38275 * 120.09936 * 0.02562 * 21 19 18 23 23 C 1.50703 * 119.96264 * 179.97438 * 22 21 19 24 24 O 1.42902 * 109.47004 * 245.00029 * 23 22 21 25 25 Si 1.86297 * 109.47392 * 5.00019 * 23 22 21 26 26 C 1.38120 * 120.06642 * 0.02562 * 22 21 19 27 27 C 1.52997 * 109.47132 * 60.00322 * 10 9 8 28 28 C 1.52997 * 109.46931 * 299.99701 * 27 10 9 29 29 H 1.09000 * 109.46951 * 300.00097 * 1 2 3 30 30 H 1.09003 * 109.46777 * 59.99792 * 1 2 3 31 31 H 1.08995 * 109.47275 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.47687 * 239.99798 * 2 1 3 33 33 H 1.09003 * 109.46777 * 120.00208 * 2 1 3 34 34 H 1.09006 * 109.47377 * 299.99922 * 8 6 4 35 35 H 1.09004 * 109.47228 * 60.00062 * 8 6 4 36 36 H 1.09000 * 109.47333 * 180.02562 * 9 8 6 37 37 H 1.08997 * 109.47419 * 59.99622 * 9 8 6 38 38 H 1.09004 * 109.46839 * 300.00275 * 12 10 9 39 39 H 1.08997 * 109.46891 * 180.02562 * 12 10 9 40 40 H 1.07998 * 120.03750 * 359.97438 * 18 17 16 41 41 H 1.08000 * 119.94878 * 180.27391 * 21 19 18 42 42 H 1.09001 * 109.46800 * 124.99985 * 23 22 21 43 43 H 0.96694 * 114.00241 * 60.00249 * 24 23 22 44 44 H 1.48501 * 110.00156 * 179.97438 * 25 23 22 45 45 H 1.48501 * 110.00093 * 301.31743 * 25 23 22 46 46 H 1.08000 * 120.01916 * 179.97438 * 26 22 21 47 47 H 1.09004 * 109.47228 * 59.99460 * 27 10 9 48 48 H 1.09000 * 109.47674 * 179.97438 * 27 10 9 49 49 H 1.09003 * 109.47475 * 179.97438 * 28 27 10 50 50 H 1.09004 * 109.47485 * 300.00015 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3449 1.5448 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9209 2.9374 0.0012 7 1 3.5852 3.4697 -0.8888 8 6 3.4489 3.6839 1.2505 9 6 4.0342 5.0975 1.2514 10 6 5.5621 5.0168 1.2522 11 9 5.9925 4.3331 2.3943 12 6 6.1475 6.4304 1.2538 13 16 5.5880 7.3149 2.7354 14 8 6.1711 6.7516 3.9024 15 8 4.1922 7.5724 2.6651 16 8 6.2291 8.6905 2.6213 17 6 5.6396 9.5007 1.7029 18 6 6.0820 9.4975 0.3885 19 6 5.4803 10.3223 -0.5438 20 35 6.0828 10.3196 -2.3363 21 6 4.4377 11.1494 -0.1662 22 6 3.9956 11.1537 1.1440 23 6 2.8600 12.0564 1.5522 24 8 3.3371 13.0314 2.4817 25 14 2.1776 12.9156 0.0466 26 6 4.5944 10.3322 2.0791 27 6 6.0341 4.2703 0.0029 28 6 5.4488 2.8567 0.0019 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 1.8934 -0.5138 -0.8899 33 1 1.8933 -0.5139 0.8900 34 1 2.3604 3.7409 1.2502 35 1 3.7846 3.1514 2.1404 36 1 3.6984 5.6292 2.1417 37 1 3.6990 5.6301 0.3615 38 1 5.8122 6.9635 0.3641 39 1 7.2359 6.3729 1.2539 40 1 6.8956 8.8515 0.0935 41 1 3.9658 11.7899 -0.8966 42 1 2.0741 11.4630 2.0193 43 1 4.0397 13.5967 2.1328 44 1 1.0566 13.8084 0.4357 45 1 3.2474 13.7028 -0.6176 46 1 4.2487 10.3365 3.1022 47 1 5.6987 4.8030 -0.8871 48 1 7.1226 4.2132 0.0031 49 1 5.7846 2.3249 -0.8883 50 1 5.7840 2.3239 0.8919 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_17850310_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:54:14 Heat of formation + Delta-G solvation = -235.120527 kcal Electronic energy + Delta-G solvation = -40216.510067 eV Core-core repulsion = 34685.398078 eV Total energy + Delta-G solvation = -5531.111990 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 481.043 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -49.09943 -42.58482 -41.66794 -40.18349 -39.17896 -38.42867 -37.89976 -37.52722 -37.32221 -34.35558 -33.91439 -32.70883 -32.54223 -32.20222 -30.72978 -29.22884 -27.40591 -25.22139 -25.04869 -24.26912 -23.64459 -23.16772 -21.96605 -21.60886 -20.94550 -19.62909 -19.23610 -18.90261 -18.68211 -18.26918 -18.00504 -17.77137 -17.62536 -17.28714 -17.09000 -16.90715 -16.48459 -16.34995 -16.19351 -15.80194 -15.33792 -15.28121 -15.03395 -14.95357 -14.75983 -14.70045 -14.55643 -14.36416 -14.17409 -13.98595 -13.83791 -13.72886 -13.55611 -13.46807 -13.33178 -13.29464 -13.25326 -13.21881 -13.12125 -12.87970 -12.68611 -12.51943 -12.44083 -12.32574 -12.18026 -12.00670 -11.94470 -11.81074 -11.66967 -11.50035 -11.31825 -11.19460 -10.92410 -10.54007 -10.21071 -5.16793 -1.38144 -0.55803 -0.47349 0.07382 0.75394 1.02068 1.20207 1.37904 1.62056 1.77242 1.79360 2.23786 2.56532 2.69363 2.92514 2.96729 3.08676 3.17531 3.23041 3.29379 3.37802 3.44227 3.50268 3.60775 3.63942 3.68827 3.84546 3.86007 3.90968 3.95808 3.97574 4.01211 4.08364 4.14264 4.22160 4.29433 4.36865 4.40710 4.43060 4.49204 4.53377 4.61939 4.70128 4.71090 4.75276 4.80421 4.82721 4.87790 4.98958 5.02261 5.12077 5.13897 5.48383 6.15996 6.75936 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.466 3.534 5 O -0.503 6.503 6 C -0.082 4.082 7 H 0.115 0.885 8 C -0.112 4.112 9 C -0.169 4.169 10 C 0.137 3.863 11 F -0.189 7.189 12 C -0.687 4.687 13 S 2.592 3.408 14 O -0.902 6.902 15 O -0.937 6.937 16 O -0.657 6.657 17 C 0.073 3.927 18 C -0.103 4.103 19 C -0.073 4.073 20 Br -0.017 7.017 21 C -0.072 4.072 22 C -0.091 4.091 23 C -0.078 4.078 24 O -0.523 6.523 25 Si 0.686 3.314 26 C -0.045 4.045 27 C -0.128 4.128 28 C -0.110 4.110 29 H 0.068 0.932 30 H 0.067 0.933 31 H 0.081 0.919 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.094 0.906 35 H 0.080 0.920 36 H 0.099 0.901 37 H 0.102 0.898 38 H 0.154 0.846 39 H 0.156 0.844 40 H 0.154 0.846 41 H 0.151 0.849 42 H 0.131 0.869 43 H 0.379 0.621 44 H -0.248 1.248 45 H -0.253 1.253 46 H 0.154 0.846 47 H 0.091 0.909 48 H 0.089 0.911 49 H 0.085 0.915 50 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.900 2.342 -7.055 7.980 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.309 3.691 5 O -0.391 6.391 6 C -0.101 4.101 7 H 0.133 0.867 8 C -0.149 4.149 9 C -0.207 4.207 10 C 0.118 3.882 11 F -0.169 7.169 12 C -0.813 4.813 13 S 2.686 3.314 14 O -0.900 6.900 15 O -0.935 6.935 16 O -0.616 6.616 17 C 0.031 3.969 18 C -0.125 4.125 19 C -0.153 4.153 20 Br 0.069 6.931 21 C -0.092 4.092 22 C -0.092 4.092 23 C -0.188 4.188 24 O -0.329 6.329 25 Si 0.586 3.414 26 C -0.066 4.066 27 C -0.166 4.166 28 C -0.147 4.147 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.100 0.900 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.112 0.888 35 H 0.099 0.901 36 H 0.117 0.883 37 H 0.121 0.879 38 H 0.172 0.828 39 H 0.174 0.826 40 H 0.172 0.828 41 H 0.168 0.832 42 H 0.149 0.851 43 H 0.227 0.773 44 H -0.172 1.172 45 H -0.178 1.178 46 H 0.172 0.828 47 H 0.110 0.890 48 H 0.108 0.892 49 H 0.104 0.896 50 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -3.198 2.660 -6.960 8.109 hybrid contribution 1.433 -0.057 0.561 1.540 sum -1.764 2.603 -6.399 7.130 Atomic orbital electron populations 1.21821 0.92292 1.03270 1.03675 1.23087 0.95614 0.79817 1.02763 1.86498 1.24294 1.32783 1.83775 1.23608 0.80756 0.92432 0.72330 1.90696 1.60472 1.43049 1.44834 1.21170 0.96632 0.90219 1.02084 0.86748 1.21502 1.02420 0.94064 0.96917 1.22663 0.91772 0.99513 1.06709 1.20488 0.94988 0.87281 0.85476 1.92989 1.91184 1.81063 1.51679 1.31586 1.14713 1.09727 1.25236 1.05746 0.74794 0.74115 0.76789 1.93712 1.78065 1.75703 1.42515 1.93669 1.31711 1.81226 1.86916 1.85801 1.70503 1.43316 1.61977 1.17883 0.96072 0.97021 0.85944 1.21323 1.00174 1.00261 0.90694 1.21496 0.99823 1.01051 0.92907 1.96902 1.88478 1.98303 1.09417 1.21326 0.94551 0.97147 0.96225 1.20277 0.98429 0.98032 0.92509 1.25157 0.96680 0.92651 1.04307 1.86665 1.58084 1.48371 1.39796 0.94973 0.82020 0.85411 0.79035 1.21362 0.91866 0.91595 1.01765 1.22096 1.02595 0.95914 0.96037 1.21487 0.91693 0.96367 1.05188 0.91309 0.91367 0.90026 0.91120 0.91077 0.88792 0.90116 0.88309 0.87908 0.82767 0.82624 0.82820 0.83210 0.85094 0.77345 1.17246 1.17799 0.82835 0.89028 0.89227 0.89634 0.89739 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.66 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.46 10.12 -39.27 -0.40 -0.85 16 4 C 0.47 0.82 7.26 36.01 0.26 1.08 16 5 O -0.50 -2.41 15.73 -18.75 -0.29 -2.70 16 6 C -0.08 0.10 2.63 -91.77 -0.24 -0.14 16 7 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 8 C -0.11 0.13 5.01 -26.73 -0.13 0.00 16 9 C -0.17 0.29 4.52 -26.73 -0.12 0.17 16 10 C 0.14 -0.16 0.88 -90.62 -0.08 -0.24 16 11 F -0.19 -0.41 15.04 2.25 0.03 -0.37 16 12 C -0.69 1.91 4.75 37.16 0.18 2.08 16 13 S 2.59 2.87 4.51 -107.50 -0.48 2.38 16 14 O -0.90 -4.84 17.60 -67.03 -1.18 -6.02 16 15 O -0.94 -1.58 13.88 -67.04 -0.93 -2.51 16 16 O -0.66 -0.47 10.05 -51.78 -0.52 -0.99 16 17 C 0.07 -0.03 4.80 -39.22 -0.19 -0.22 16 18 C -0.10 0.25 8.20 -39.41 -0.32 -0.08 16 19 C -0.07 0.18 6.22 -39.54 -0.25 -0.07 16 20 Br -0.02 0.04 33.70 -68.01 -2.29 -2.25 16 21 C -0.07 0.20 8.41 -39.53 -0.33 -0.13 16 22 C -0.09 0.19 5.35 -104.65 -0.56 -0.37 16 23 C -0.08 0.19 2.80 36.01 0.10 0.29 16 24 O -0.52 0.45 12.83 -35.23 -0.45 0.00 16 25 Si 0.69 -2.18 29.88 -169.99 -5.08 -7.26 16 26 C -0.05 0.02 8.68 -39.43 -0.34 -0.32 16 27 C -0.13 0.36 5.00 -26.73 -0.13 0.23 16 28 C -0.11 0.11 4.37 -26.73 -0.12 -0.01 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 33 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 34 H 0.09 -0.19 8.11 -51.93 -0.42 -0.61 16 35 H 0.08 0.01 7.80 -51.93 -0.41 -0.40 16 36 H 0.10 -0.06 5.46 -51.93 -0.28 -0.35 16 37 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 38 H 0.15 -0.93 6.60 -51.92 -0.34 -1.27 16 39 H 0.16 -0.73 8.14 -51.93 -0.42 -1.16 16 40 H 0.15 -0.76 7.49 -52.49 -0.39 -1.15 16 41 H 0.15 -0.66 4.84 -52.49 -0.25 -0.91 16 42 H 0.13 -0.41 7.96 -51.93 -0.41 -0.82 16 43 H 0.38 -1.47 8.70 45.56 0.40 -1.07 16 44 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 45 H -0.25 0.43 7.01 56.52 0.40 0.83 16 46 H 0.15 -0.07 8.06 -52.49 -0.42 -0.50 16 47 H 0.09 -0.47 8.14 -51.93 -0.42 -0.90 16 48 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 49 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 50 H 0.08 0.08 7.76 -51.93 -0.40 -0.33 16 LS Contribution 435.10 15.07 6.56 6.56 Total: 0.00 -11.12 435.10 -13.50 -24.62 By element: Atomic # 1 Polarization: -6.97 SS G_CDS: -6.79 Total: -13.77 kcal Atomic # 6 Polarization: 4.84 SS G_CDS: -1.67 Total: 3.17 kcal Atomic # 8 Polarization: -9.31 SS G_CDS: -3.78 Total: -13.08 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.03 Total: -0.37 kcal Atomic # 14 Polarization: -2.18 SS G_CDS: -5.08 Total: -7.26 kcal Atomic # 16 Polarization: 2.87 SS G_CDS: -0.48 Total: 2.38 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -2.29 Total: -2.25 kcal Total LS contribution 6.56 Total: 6.56 kcal Total: -11.12 -13.50 -24.62 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_17850310_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -210.500 kcal (2) G-P(sol) polarization free energy of solvation -11.121 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -221.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.500 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.621 kcal (6) G-S(sol) free energy of system = (1) + (5) -235.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds