Wall clock time and date at job start Mon Mar 8 2021 09:56:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.45199 * 109.47197 * 2 1 4 4 C 1.34227 * 117.00530 * 179.97438 * 3 2 1 5 5 O 1.20829 * 119.99669 * 0.02562 * 4 3 2 6 6 C 1.50702 * 120.00231 * 179.97438 * 4 3 2 7 7 H 1.08996 * 112.84751 * 48.80992 * 6 4 3 8 8 C 1.53777 * 113.61262 * 180.02562 * 6 4 3 9 9 C 1.53781 * 87.08184 * 139.98125 * 8 6 4 10 10 F 1.39905 * 113.61209 * 89.11429 * 9 8 6 11 11 C 1.52995 * 113.61577 * 219.93336 * 9 8 6 12 12 S 1.81400 * 109.47309 * 178.47091 * 11 9 8 13 13 O 1.42101 * 110.54109 * 291.62671 * 12 11 9 14 14 O 1.42102 * 110.54403 * 68.37513 * 12 11 9 15 15 O 1.52200 * 104.45126 * 180.02562 * 12 11 9 16 16 C 1.35896 * 113.99829 * 75.00027 * 15 12 11 17 17 C 1.38689 * 120.05054 * 269.71869 * 16 15 12 18 18 C 1.38254 * 119.93516 * 179.74942 * 17 16 15 19 19 Br 1.89100 * 119.98491 * 180.27745 * 18 17 16 20 20 C 1.38340 * 120.03170 * 0.53250 * 18 17 16 21 21 C 1.38265 * 120.10474 * 359.74228 * 20 18 17 22 22 C 1.50705 * 119.97108 * 179.97438 * 21 20 18 23 23 O 1.42893 * 109.46791 * 119.97916 * 22 21 20 24 24 Si 1.86300 * 109.46665 * 359.97438 * 22 21 20 25 25 C 1.38132 * 120.06356 * 359.97438 * 21 20 18 26 26 C 1.53779 * 113.61502 * 277.50138 * 6 4 3 27 27 H 1.09002 * 109.47140 * 60.00742 * 1 2 3 28 28 H 1.09003 * 109.46976 * 180.02562 * 1 2 3 29 29 H 1.08996 * 109.47671 * 300.00095 * 1 2 3 30 30 H 1.08996 * 109.47671 * 239.99905 * 2 1 3 31 31 H 1.09002 * 109.47140 * 119.99258 * 2 1 3 32 32 H 1.09009 * 113.61922 * 25.43580 * 8 6 4 33 33 H 1.09003 * 113.61452 * 254.52986 * 8 6 4 34 34 H 1.09002 * 109.47543 * 298.46615 * 11 9 8 35 35 H 1.08995 * 109.47467 * 58.47268 * 11 9 8 36 36 H 1.08002 * 120.03158 * 0.03321 * 17 16 15 37 37 H 1.07999 * 119.94602 * 179.76627 * 20 18 17 38 38 H 1.08994 * 109.47106 * 239.98521 * 22 21 20 39 39 H 0.96698 * 114.00437 * 300.00101 * 23 22 21 40 40 H 1.48498 * 109.99705 * 179.97438 * 24 22 21 41 41 H 1.48498 * 110.00295 * 301.31349 * 24 22 21 42 42 H 1.08005 * 120.01640 * 179.97438 * 25 21 20 43 43 H 1.08997 * 113.61925 * 105.47211 * 26 6 4 44 44 H 1.09005 * 113.61759 * 334.56358 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9375 0.0000 7 1 3.4707 3.5819 0.7553 8 6 5.4580 2.9682 0.0001 9 6 5.3564 4.1422 -0.9880 10 9 5.2830 5.3933 -0.3662 11 6 6.3999 4.0946 -2.1058 12 16 6.1504 5.4992 -3.2263 13 8 4.9356 5.3512 -3.9486 14 8 6.4707 6.7204 -2.5740 15 8 7.2357 5.3408 -4.2815 16 6 6.9900 4.3542 -5.1832 17 6 7.4402 3.0648 -4.9418 18 6 7.1845 2.0618 -5.8583 19 35 7.7909 0.3016 -5.5268 20 6 6.4898 2.3464 -7.0203 21 6 6.0452 3.6325 -7.2652 22 6 5.2891 3.9393 -8.5323 23 8 3.9901 4.4356 -8.2035 24 14 5.1222 2.3859 -9.5471 25 6 6.2933 4.6366 -6.3496 26 6 3.9867 3.5763 -1.3973 27 1 -0.3633 0.5137 -0.8901 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8899 30 1 1.8933 -0.5138 -0.8899 31 1 1.8933 -0.5137 0.8901 32 1 5.9127 2.0750 -0.4285 33 1 5.8892 3.2437 0.9626 34 1 7.3988 4.1483 -1.6730 35 1 6.2945 3.1631 -2.6620 36 1 7.9861 2.8435 -4.0365 37 1 6.2940 1.5626 -7.7371 38 1 5.8311 4.6913 -9.1057 39 1 3.4507 3.8172 -7.6919 40 1 4.3778 2.6749 -10.7992 41 1 6.4662 1.8424 -9.8687 42 1 5.9460 5.6410 -6.5418 43 1 3.2297 4.3427 -1.5634 44 1 4.0393 2.8492 -2.2078 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_17850310_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:56:43 Heat of formation + Delta-G solvation = -195.447335 kcal Electronic energy + Delta-G solvation = -35717.320955 eV Core-core repulsion = 30499.004562 eV Total energy + Delta-G solvation = -5218.316393 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -49.24323 -42.57163 -41.84051 -40.14723 -39.44318 -38.41754 -37.76457 -37.49178 -37.29849 -33.91778 -32.94714 -32.62863 -32.05450 -30.68661 -27.51421 -27.42229 -26.94730 -25.10310 -24.07426 -23.26213 -22.33271 -21.57618 -20.97759 -19.63949 -19.26216 -19.17580 -18.70016 -18.23019 -17.94587 -17.80312 -17.65811 -17.40166 -17.14613 -16.55459 -16.43177 -16.24054 -16.11994 -15.70253 -15.45923 -15.26062 -14.80052 -14.78044 -14.69500 -14.69148 -14.42794 -14.31058 -13.86972 -13.82556 -13.81199 -13.45916 -13.36684 -13.27890 -13.20644 -13.17571 -13.03098 -13.01383 -12.63318 -12.55523 -12.33579 -12.15835 -12.06397 -11.97991 -11.64783 -11.60356 -11.58365 -11.43162 -10.78805 -10.45294 -10.19350 -5.23865 -1.38793 -0.54181 -0.46607 0.09562 0.75857 1.02113 1.04713 1.42889 1.49978 1.78863 1.80639 2.25691 2.46390 2.57856 2.63748 2.75152 2.97541 3.03198 3.10455 3.21996 3.30750 3.38492 3.44211 3.63305 3.65560 3.73511 3.85578 3.87800 3.90835 3.93857 4.12580 4.17936 4.20304 4.23041 4.23970 4.37230 4.42201 4.46848 4.53780 4.54653 4.66052 4.75667 4.75760 4.86049 4.97467 5.13146 5.37034 6.38520 6.62833 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.475 3.525 5 O -0.502 6.502 6 C -0.109 4.109 7 H 0.138 0.862 8 C -0.121 4.121 9 C 0.103 3.897 10 F -0.170 7.170 11 C -0.675 4.675 12 S 2.592 3.408 13 O -0.932 6.932 14 O -0.902 6.902 15 O -0.657 6.657 16 C 0.072 3.928 17 C -0.103 4.103 18 C -0.073 4.073 19 Br -0.016 7.016 20 C -0.072 4.072 21 C -0.094 4.094 22 C -0.070 4.070 23 O -0.531 6.531 24 Si 0.686 3.314 25 C -0.046 4.046 26 C -0.143 4.143 27 H 0.069 0.931 28 H 0.082 0.918 29 H 0.068 0.932 30 H 0.072 0.928 31 H 0.071 0.929 32 H 0.122 0.878 33 H 0.102 0.898 34 H 0.159 0.841 35 H 0.155 0.845 36 H 0.154 0.846 37 H 0.150 0.850 38 H 0.125 0.875 39 H 0.383 0.617 40 H -0.246 1.246 41 H -0.251 1.251 42 H 0.155 0.845 43 H 0.111 0.889 44 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.118 -5.968 -0.671 6.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.389 6.389 6 C -0.128 4.128 7 H 0.156 0.844 8 C -0.159 4.159 9 C 0.083 3.917 10 F -0.150 7.150 11 C -0.799 4.799 12 S 2.685 3.315 13 O -0.931 6.931 14 O -0.900 6.900 15 O -0.616 6.616 16 C 0.030 3.970 17 C -0.125 4.125 18 C -0.153 4.153 19 Br 0.070 6.930 20 C -0.092 4.092 21 C -0.095 4.095 22 C -0.181 4.181 23 O -0.337 6.337 24 Si 0.587 3.413 25 C -0.067 4.067 26 C -0.181 4.181 27 H 0.088 0.912 28 H 0.101 0.899 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.140 0.860 33 H 0.120 0.880 34 H 0.177 0.823 35 H 0.173 0.827 36 H 0.172 0.828 37 H 0.167 0.833 38 H 0.142 0.858 39 H 0.231 0.769 40 H -0.170 1.170 41 H -0.175 1.175 42 H 0.172 0.828 43 H 0.129 0.871 44 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -1.387 -6.073 -1.877 6.506 hybrid contribution 0.648 0.443 0.835 1.146 sum -0.739 -5.631 -1.042 5.774 Atomic orbital electron populations 1.21829 0.92200 1.03331 1.03788 1.23123 0.95731 0.79595 1.02830 1.86520 1.24000 1.32974 1.83486 1.23199 0.80909 0.91788 0.72331 1.90693 1.60535 1.42694 1.45011 1.22474 0.97169 0.92157 1.01028 0.84390 1.23593 0.93828 0.97696 1.00821 1.21156 0.95363 0.82246 0.92904 1.93023 1.96996 1.41428 1.83543 1.31364 1.09915 1.24391 1.14267 1.05740 0.73914 0.76545 0.75308 1.93686 1.45466 1.86668 1.67254 1.93706 1.82504 1.38758 1.75013 1.85806 1.68325 1.57545 1.49877 1.17888 1.03272 0.84646 0.91195 1.21324 0.99640 0.90322 1.01246 1.21516 1.03454 0.92926 0.97392 1.96910 1.87798 1.12504 1.95780 1.21277 0.95562 0.96709 0.95604 1.20373 0.99180 0.92269 0.97696 1.25162 0.85514 1.10453 0.96978 1.86560 1.23944 1.46372 1.76812 0.94794 0.84381 0.80226 0.81940 1.21352 0.93015 1.01641 0.90649 1.23774 0.95970 1.01836 0.96517 0.91240 0.89941 0.91319 0.90961 0.91014 0.86006 0.87952 0.82320 0.82710 0.82791 0.83290 0.85806 0.76873 1.16984 1.17549 0.82778 0.87081 0.86577 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.37 10.29 37.15 0.38 0.75 16 2 C 0.06 -0.05 6.19 37.15 0.23 0.18 16 3 O -0.35 -0.21 10.22 -39.25 -0.40 -0.62 16 4 C 0.48 0.31 7.48 36.01 0.27 0.58 16 5 O -0.50 -1.50 15.65 -18.75 -0.29 -1.79 16 6 C -0.11 0.17 4.24 -90.96 -0.39 -0.22 16 7 H 0.14 -0.39 8.14 -51.93 -0.42 -0.81 16 8 C -0.12 0.25 6.86 -25.92 -0.18 0.07 16 9 C 0.10 -0.12 1.60 -89.83 -0.14 -0.26 16 10 F -0.17 -0.24 16.35 2.25 0.04 -0.21 16 11 C -0.67 1.69 5.17 37.16 0.19 1.88 16 12 S 2.59 3.32 4.91 -107.50 -0.53 2.79 16 13 O -0.93 -2.10 16.26 -67.04 -1.09 -3.19 16 14 O -0.90 -4.75 17.57 -67.03 -1.18 -5.93 16 15 O -0.66 -0.57 10.05 -51.74 -0.52 -1.09 16 16 C 0.07 -0.01 4.79 -39.22 -0.19 -0.19 16 17 C -0.10 0.19 8.21 -39.41 -0.32 -0.13 16 18 C -0.07 0.14 6.22 -39.54 -0.25 -0.11 16 19 Br -0.02 0.03 33.70 -68.01 -2.29 -2.26 16 20 C -0.07 0.17 8.41 -39.53 -0.33 -0.16 16 21 C -0.09 0.15 5.39 -104.65 -0.56 -0.41 16 22 C -0.07 0.15 2.82 36.01 0.10 0.25 16 23 O -0.53 0.64 12.77 -35.23 -0.45 0.19 16 24 Si 0.69 -2.00 29.79 -169.99 -5.06 -7.07 16 25 C -0.05 0.00 8.61 -39.43 -0.34 -0.34 16 26 C -0.14 0.27 7.07 -25.94 -0.18 0.09 16 27 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 29 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 30 H 0.07 -0.07 8.13 -51.93 -0.42 -0.50 16 31 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 32 H 0.12 -0.30 7.39 -51.92 -0.38 -0.68 16 33 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 34 H 0.16 -0.76 8.14 -51.92 -0.42 -1.18 16 35 H 0.15 -0.80 6.46 -51.93 -0.34 -1.14 16 36 H 0.15 -0.67 7.52 -52.49 -0.39 -1.07 16 37 H 0.15 -0.61 4.88 -52.49 -0.26 -0.87 16 38 H 0.12 -0.26 7.96 -51.93 -0.41 -0.68 16 39 H 0.38 -1.90 8.70 45.56 0.40 -1.50 16 40 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 41 H -0.25 0.25 7.11 56.52 0.40 0.65 16 42 H 0.15 -0.01 8.06 -52.48 -0.42 -0.43 16 43 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 44 H 0.12 -0.38 7.94 -51.93 -0.41 -0.79 16 LS Contribution 406.98 15.07 6.13 6.13 Total: 0.00 -10.92 406.98 -12.58 -23.50 By element: Atomic # 1 Polarization: -7.20 SS G_CDS: -5.22 Total: -12.43 kcal Atomic # 6 Polarization: 3.69 SS G_CDS: -1.71 Total: 1.98 kcal Atomic # 8 Polarization: -8.51 SS G_CDS: -3.93 Total: -12.44 kcal Atomic # 9 Polarization: -0.24 SS G_CDS: 0.04 Total: -0.21 kcal Atomic # 14 Polarization: -2.00 SS G_CDS: -5.06 Total: -7.07 kcal Atomic # 16 Polarization: 3.32 SS G_CDS: -0.53 Total: 2.79 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -10.92 -12.58 -23.50 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_17850310_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -171.952 kcal (2) G-P(sol) polarization free energy of solvation -10.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.577 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.495 kcal (6) G-S(sol) free energy of system = (1) + (5) -195.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds