Wall clock time and date at job start Mon Mar 8 2021 09:51:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86305 * 109.47377 * 2 1 4 4 C 1.50694 * 109.47418 * 239.99501 * 2 1 3 5 5 C 1.38184 * 120.00337 * 104.51899 * 4 2 1 6 6 C 1.38249 * 120.10508 * 180.02562 * 5 4 2 7 7 C 1.38357 * 120.11275 * 359.95099 * 6 5 4 8 8 Cl 1.73607 * 119.99763 * 180.02562 * 7 6 5 9 9 C 1.38442 * 120.00823 * 359.79309 * 7 6 5 10 10 F 1.35098 * 120.05754 * 180.25089 * 9 7 6 11 11 C 1.38683 * 120.00688 * 284.54425 * 4 2 1 12 12 O 1.35953 * 120.05174 * 359.95263 * 11 4 2 13 13 S 1.52209 * 113.99946 * 269.93084 * 12 11 4 14 14 O 1.42099 * 104.27528 * 167.60919 * 13 12 11 15 15 O 1.42097 * 104.27554 * 39.74750 * 13 12 11 16 16 C 1.81395 * 104.44722 * 283.67779 * 13 12 11 17 17 H 1.08998 * 112.85425 * 54.51565 * 16 13 12 18 18 C 1.53780 * 113.61216 * 185.70976 * 16 13 12 19 19 C 1.53781 * 87.17167 * 140.02589 * 18 16 13 20 20 H 1.08999 * 113.61383 * 220.06105 * 19 18 16 21 21 O 1.42898 * 113.61643 * 89.16088 * 19 18 16 22 22 C 1.42899 * 114.00184 * 150.00212 * 21 19 18 23 23 C 1.50701 * 109.47379 * 180.02562 * 22 21 19 24 24 C 1.38233 * 119.99775 * 269.72792 * 23 22 21 25 25 C 1.38237 * 119.99854 * 179.80560 * 24 23 22 26 26 C 1.38238 * 120.00134 * 0.39911 * 25 24 23 27 27 C 1.38230 * 119.99667 * 359.85016 * 26 25 24 28 28 C 1.38238 * 120.00563 * 359.95911 * 27 26 25 29 29 C 1.53782 * 113.69259 * 283.24514 * 16 13 12 30 30 H 0.96705 * 113.99691 * 60.00103 * 1 2 3 31 31 H 1.08997 * 109.46958 * 119.99615 * 2 1 3 32 32 H 1.48499 * 109.99916 * 59.99282 * 3 2 1 33 33 H 1.48493 * 110.00022 * 181.31663 * 3 2 1 34 34 H 1.07996 * 119.94463 * 0.02562 * 5 4 2 35 35 H 1.07999 * 119.94626 * 179.97438 * 6 5 4 36 36 H 1.09002 * 113.61668 * 254.61366 * 18 16 13 37 37 H 1.08997 * 113.61714 * 25.43374 * 18 16 13 38 38 H 1.09007 * 109.47088 * 299.99665 * 22 21 19 39 39 H 1.08993 * 109.47745 * 59.99421 * 22 21 19 40 40 H 1.08000 * 120.00376 * 359.97438 * 24 23 22 41 41 H 1.08006 * 119.99775 * 180.22417 * 25 24 23 42 42 H 1.07996 * 120.00233 * 179.83514 * 26 25 24 43 43 H 1.08004 * 120.00075 * 179.97438 * 27 26 25 44 44 H 1.08000 * 120.00458 * 179.97438 * 28 27 26 45 45 H 1.08996 * 113.61406 * 334.56136 * 29 16 13 46 46 H 1.09005 * 113.61558 * 105.38007 * 29 16 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.4446 0.0170 -2.2872 6 6 2.9056 -0.6327 -3.4171 7 6 2.8556 -2.0132 -3.4931 8 17 3.4359 -2.8259 -4.9132 9 6 2.3472 -2.7469 -2.4349 10 9 2.3026 -4.0953 -2.5060 11 6 1.8783 -2.0944 -1.3023 12 8 1.3740 -2.8114 -0.2631 13 16 2.4141 -3.2173 0.7714 14 8 1.6482 -3.6769 1.8766 15 8 3.2565 -2.0787 0.8867 16 6 3.3072 -4.5943 -0.0009 17 1 3.7098 -4.3409 -0.9815 18 6 4.3308 -5.2643 0.9309 19 6 3.8752 -6.6088 0.3394 20 1 3.7953 -7.4062 1.0782 21 8 4.6070 -6.9998 -0.8240 22 6 4.7180 -8.4144 -0.9927 23 6 5.5049 -8.7111 -2.2433 24 6 4.8516 -8.8562 -3.4528 25 6 5.5738 -9.1244 -4.6006 26 6 6.9485 -9.2555 -4.5375 27 6 7.6012 -9.1154 -3.3271 28 6 6.8795 -8.8434 -2.1799 29 6 2.5336 -5.9232 0.0227 30 1 -0.3933 0.4417 -0.7651 31 1 1.7923 -0.5138 0.8900 32 1 1.5615 2.4679 1.2084 33 1 3.5346 1.7702 -0.0321 34 1 2.4856 1.0946 -2.2303 35 1 3.3058 -0.0616 -4.2418 36 1 5.3651 -5.0124 0.6965 37 1 4.0972 -5.1514 1.9895 38 1 5.2298 -8.8440 -0.1314 39 1 3.7223 -8.8495 -1.0778 40 1 3.7772 -8.7575 -3.5015 41 1 5.0637 -9.2342 -5.5462 42 1 7.5124 -9.4676 -5.4337 43 1 8.6752 -9.2182 -3.2776 44 1 7.3894 -8.7343 -1.2341 45 1 1.8078 -5.9916 0.8329 46 1 2.1157 -6.2024 -0.9446 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_18323490_15608174.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:51:21 Heat of formation + Delta-G solvation = -121.727577 kcal Electronic energy + Delta-G solvation = -38606.230682 eV Core-core repulsion = 33305.132999 eV Total energy + Delta-G solvation = -5301.097683 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 429.062 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -50.55143 -42.50645 -40.84472 -40.00173 -39.85883 -38.41635 -38.18797 -37.49138 -37.26512 -37.08476 -32.78637 -32.73210 -31.84880 -31.81707 -27.67304 -27.35872 -27.10716 -26.55238 -25.09460 -23.53748 -23.50058 -22.34383 -22.27556 -21.20019 -19.87559 -19.48576 -19.23154 -18.77100 -18.42854 -17.83855 -17.68298 -17.40818 -17.25444 -17.01433 -16.70346 -16.62710 -16.43057 -16.03868 -15.83239 -15.69673 -15.50599 -15.31541 -15.05871 -14.76627 -14.49209 -14.35336 -14.22251 -14.09205 -14.04524 -13.88970 -13.81125 -13.67192 -13.55457 -13.35719 -13.30297 -13.23343 -13.22706 -12.73103 -12.39710 -12.28708 -12.21549 -12.12597 -12.05156 -11.95201 -11.83558 -11.31367 -10.67043 -10.66508 -10.41228 -10.20239 -9.86156 -9.80974 -5.18097 -1.29066 -0.69231 -0.50055 0.28534 0.45683 0.46194 0.87431 1.07617 1.57749 1.68969 1.92213 2.28174 2.32230 2.44275 2.63425 2.80919 2.92975 3.03248 3.15500 3.17406 3.33587 3.34971 3.39897 3.54431 3.67961 3.82241 3.85020 3.95359 4.03012 4.06032 4.06756 4.19253 4.23728 4.25723 4.32688 4.33736 4.42961 4.46832 4.51093 4.56983 4.58916 4.63501 4.68300 4.73072 4.77711 5.00588 5.07368 5.08224 5.49682 5.57508 5.60416 6.01845 6.08026 6.42544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.092 4.092 3 Si 0.700 3.300 4 C -0.060 4.060 5 C -0.095 4.095 6 C -0.057 4.057 7 C -0.059 4.059 8 Cl -0.020 7.020 9 C 0.102 3.898 10 F -0.105 7.105 11 C 0.072 3.928 12 O -0.643 6.643 13 S 2.580 3.420 14 O -0.912 6.912 15 O -0.950 6.950 16 C -0.636 4.636 17 H 0.159 0.841 18 C -0.108 4.108 19 C 0.081 3.919 20 H 0.091 0.909 21 O -0.354 6.354 22 C 0.101 3.899 23 C -0.095 4.095 24 C -0.097 4.097 25 C -0.123 4.123 26 C -0.112 4.112 27 C -0.123 4.123 28 C -0.098 4.098 29 C -0.128 4.128 30 H 0.381 0.619 31 H 0.125 0.875 32 H -0.245 1.245 33 H -0.244 1.244 34 H 0.163 0.837 35 H 0.165 0.835 36 H 0.102 0.898 37 H 0.106 0.894 38 H 0.063 0.937 39 H 0.062 0.938 40 H 0.123 0.877 41 H 0.124 0.876 42 H 0.124 0.876 43 H 0.125 0.875 44 H 0.123 0.877 45 H 0.112 0.888 46 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.484 1.501 -5.075 5.497 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.201 4.201 3 Si 0.599 3.401 4 C -0.063 4.063 5 C -0.113 4.113 6 C -0.076 4.076 7 C -0.087 4.087 8 Cl 0.010 6.990 9 C 0.079 3.921 10 F -0.083 7.083 11 C 0.029 3.971 12 O -0.600 6.600 13 S 2.677 3.323 14 O -0.910 6.910 15 O -0.948 6.948 16 C -0.744 4.744 17 H 0.176 0.824 18 C -0.147 4.147 19 C 0.021 3.979 20 H 0.109 0.891 21 O -0.273 6.273 22 C 0.025 3.975 23 C -0.095 4.095 24 C -0.115 4.115 25 C -0.141 4.141 26 C -0.130 4.130 27 C -0.141 4.141 28 C -0.116 4.116 29 C -0.166 4.166 30 H 0.228 0.772 31 H 0.142 0.858 32 H -0.169 1.169 33 H -0.168 1.168 34 H 0.180 0.820 35 H 0.183 0.817 36 H 0.120 0.880 37 H 0.124 0.876 38 H 0.081 0.919 39 H 0.080 0.920 40 H 0.141 0.859 41 H 0.142 0.858 42 H 0.142 0.858 43 H 0.143 0.857 44 H 0.141 0.859 45 H 0.130 0.870 46 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 1.760 2.196 -3.819 4.744 hybrid contribution 0.223 -1.840 -0.150 1.860 sum 1.983 0.356 -3.969 4.451 Atomic orbital electron populations 1.86635 1.15821 1.81689 1.49000 1.25539 0.86016 1.11886 0.96626 0.95454 0.81581 0.75147 0.87961 1.20647 0.96442 0.91162 0.98006 1.21038 0.97883 1.00784 0.91581 1.21261 0.96245 0.91054 0.99014 1.20844 1.03973 0.93601 0.90280 1.98455 1.86374 1.78776 1.35431 1.17479 1.02242 0.78324 0.94052 1.91619 1.93797 1.26768 1.96107 1.17528 1.03475 0.89843 0.86274 1.85772 1.58197 1.72426 1.43652 1.06060 0.74444 0.76570 0.75193 1.93669 1.67366 1.82851 1.47127 1.93622 1.69667 1.46195 1.85319 1.32230 1.12616 1.15929 1.13650 0.82369 1.22890 0.99550 0.94761 0.97477 1.22811 0.91104 0.95790 0.88152 0.89128 1.87988 1.73880 1.22100 1.43320 1.21449 0.98940 0.81808 0.95295 1.19544 0.93917 1.01712 0.94299 1.21081 1.00075 0.98402 0.91988 1.21195 0.94369 1.00125 0.98420 1.21261 0.94723 0.99026 0.98000 1.21193 1.00143 1.00125 0.92672 1.21081 0.93243 0.98495 0.98802 1.23261 0.97406 0.90598 1.05361 0.77201 0.85818 1.16907 1.16779 0.82017 0.81742 0.87954 0.87564 0.91926 0.91952 0.85926 0.85767 0.85830 0.85748 0.85907 0.87010 0.88356 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.62 12.88 -35.23 -0.45 -1.07 16 2 C -0.09 -0.14 2.24 36.00 0.08 -0.06 16 3 Si 0.70 -0.84 29.93 -169.99 -5.09 -5.93 16 4 C -0.06 -0.04 4.66 -104.48 -0.49 -0.53 16 5 C -0.10 0.26 8.65 -39.60 -0.34 -0.08 16 6 C -0.06 0.17 9.83 -39.53 -0.39 -0.22 16 7 C -0.06 0.02 6.32 -39.46 -0.25 -0.23 16 8 Cl -0.02 0.00 28.62 -51.86 -1.48 -1.48 16 9 C 0.10 0.14 6.45 -39.27 -0.25 -0.11 16 10 F -0.10 -0.20 13.79 2.25 0.03 -0.17 16 11 C 0.07 0.17 4.77 -39.18 -0.19 -0.01 16 12 O -0.64 -2.47 9.33 -51.92 -0.48 -2.95 16 13 S 2.58 9.73 4.83 -107.50 -0.52 9.21 16 14 O -0.91 -5.71 17.44 -67.04 -1.17 -6.88 16 15 O -0.95 -4.66 14.30 -67.04 -0.96 -5.62 16 16 C -0.64 -0.78 3.16 -25.92 -0.08 -0.86 16 17 H 0.16 0.16 5.78 -51.93 -0.30 -0.14 16 18 C -0.11 0.01 7.49 -25.92 -0.19 -0.18 16 19 C 0.08 -0.01 4.38 -25.83 -0.11 -0.13 16 20 H 0.09 -0.20 7.87 -51.93 -0.41 -0.61 16 21 O -0.35 -0.53 10.26 -35.23 -0.36 -0.89 16 22 C 0.10 0.01 5.90 36.01 0.21 0.22 16 23 C -0.09 -0.13 5.51 -104.62 -0.58 -0.71 16 24 C -0.10 -0.12 9.70 -39.58 -0.38 -0.51 16 25 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 26 C -0.11 -0.08 10.05 -39.58 -0.40 -0.48 16 27 C -0.12 -0.10 10.05 -39.58 -0.40 -0.50 16 28 C -0.10 -0.11 9.70 -39.58 -0.38 -0.49 16 29 C -0.13 -0.04 7.41 -25.83 -0.19 -0.23 16 30 H 0.38 -1.55 8.70 45.56 0.40 -1.16 16 31 H 0.12 0.50 5.49 -51.93 -0.29 0.21 16 32 H -0.24 -0.47 7.11 56.52 0.40 -0.07 16 33 H -0.24 -0.21 7.11 56.52 0.40 0.19 16 34 H 0.16 -1.03 5.14 -52.49 -0.27 -1.30 16 35 H 0.17 -0.99 8.06 -52.49 -0.42 -1.42 16 36 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.11 -0.17 8.10 -51.93 -0.42 -0.59 16 38 H 0.06 -0.08 8.09 -51.92 -0.42 -0.50 16 39 H 0.06 -0.07 8.08 -51.93 -0.42 -0.49 16 40 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 41 H 0.12 -0.10 8.06 -52.48 -0.42 -0.53 16 42 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 43 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 44 H 0.12 -0.04 8.06 -52.49 -0.42 -0.47 16 45 H 0.11 -0.05 7.56 -51.93 -0.39 -0.44 16 46 H 0.10 0.01 7.97 -51.93 -0.41 -0.41 16 LS Contribution 411.16 15.07 6.20 6.20 Total: 0.00 -10.81 411.16 -14.11 -24.92 By element: Atomic # 1 Polarization: -4.63 SS G_CDS: -5.09 Total: -9.72 kcal Atomic # 6 Polarization: -0.89 SS G_CDS: -4.73 Total: -5.62 kcal Atomic # 8 Polarization: -13.98 SS G_CDS: -3.43 Total: -17.41 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.03 Total: -0.17 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.09 Total: -5.93 kcal Atomic # 16 Polarization: 9.73 SS G_CDS: -0.52 Total: 9.21 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -1.48 Total: -1.48 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -10.81 -14.11 -24.92 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_18323490_15608174.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.804 kcal (2) G-P(sol) polarization free energy of solvation -10.810 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.614 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.923 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds