Wall clock time and date at job start Mon Mar 8 2021 10:02:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.45199 * 109.47482 * 2 1 4 4 C 1.34228 * 117.00436 * 180.02562 * 3 2 1 5 5 O 1.20826 * 120.00050 * 359.97438 * 4 3 2 6 6 C 1.50701 * 120.00108 * 179.97438 * 4 3 2 7 7 H 1.08992 * 109.47284 * 300.00185 * 6 4 3 8 8 C 1.53002 * 109.46958 * 60.00103 * 6 4 3 9 9 C 1.52997 * 109.46978 * 180.02562 * 8 6 4 10 10 C 1.53006 * 109.47164 * 299.99874 * 9 8 6 11 11 F 1.39900 * 109.46764 * 300.00189 * 10 9 8 12 12 C 1.52992 * 109.47223 * 180.02562 * 10 9 8 13 13 S 1.81400 * 109.47583 * 59.99628 * 12 10 9 14 14 O 1.42098 * 110.54210 * 291.62608 * 13 12 10 15 15 O 1.42102 * 110.53978 * 68.37524 * 13 12 10 16 16 O 1.52197 * 104.45232 * 180.02562 * 13 12 10 17 17 C 1.35951 * 114.00091 * 74.99967 * 16 13 12 18 18 C 1.38873 * 120.05792 * 269.72327 * 17 16 13 19 19 F 1.35097 * 120.05155 * 0.02562 * 18 17 16 20 20 C 1.38443 * 119.89546 * 179.79085 * 18 17 16 21 21 Cl 1.73597 * 119.99572 * 180.23476 * 20 18 17 22 22 C 1.38363 * 120.00723 * 0.46194 * 20 18 17 23 23 C 1.38256 * 120.11002 * 359.79759 * 22 20 18 24 24 C 1.38178 * 120.10785 * 359.96724 * 23 22 20 25 25 C 1.50701 * 120.00470 * 180.02562 * 24 23 22 26 26 O 1.42897 * 109.46834 * 254.97882 * 25 24 23 27 27 Si 1.86293 * 109.47174 * 14.98140 * 25 24 23 28 28 C 1.52997 * 109.47127 * 59.99836 * 10 9 8 29 29 C 1.52996 * 109.46990 * 179.97438 * 6 4 3 30 30 H 1.09006 * 109.47020 * 299.99915 * 1 2 3 31 31 H 1.09001 * 109.47508 * 59.99424 * 1 2 3 32 32 H 1.08999 * 109.47442 * 180.02562 * 1 2 3 33 33 H 1.09006 * 109.47020 * 240.00085 * 2 1 3 34 34 H 1.09001 * 109.47526 * 120.00019 * 2 1 3 35 35 H 1.09002 * 109.47097 * 299.99808 * 8 6 4 36 36 H 1.09001 * 109.47142 * 59.99773 * 8 6 4 37 37 H 1.09001 * 109.47375 * 59.99908 * 9 8 6 38 38 H 1.09000 * 109.47140 * 179.97438 * 9 8 6 39 39 H 1.09002 * 109.47103 * 179.97438 * 12 10 9 40 40 H 1.09001 * 109.47066 * 299.99881 * 12 10 9 41 41 H 1.07997 * 119.94486 * 179.76405 * 22 20 18 42 42 H 1.08001 * 119.94689 * 179.97438 * 23 22 20 43 43 H 1.09001 * 109.46537 * 134.98210 * 25 24 23 44 44 H 0.96711 * 113.99836 * 180.02562 * 26 25 24 45 45 H 1.48498 * 110.00208 * 178.67703 * 27 25 24 46 46 H 1.48499 * 109.99971 * 300.00129 * 27 25 24 47 47 H 1.09002 * 109.47153 * 180.02562 * 28 10 9 48 48 H 1.09001 * 109.46832 * 60.00321 * 28 10 9 49 49 H 1.09004 * 109.47368 * 60.00232 * 29 6 4 50 50 H 1.09001 * 109.47372 * 300.00388 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9207 2.9374 -0.0012 7 1 3.5845 3.4693 -0.8911 8 6 3.4496 3.6847 1.2481 9 6 4.0339 5.0987 1.2471 10 6 5.5619 5.0192 1.2463 11 9 5.9939 4.3368 2.3886 12 6 6.1462 6.4331 1.2460 13 16 5.5876 7.3187 2.7273 14 8 4.1916 7.5751 2.6582 15 8 6.1724 6.7569 3.8942 16 8 6.2276 8.6947 2.6113 17 6 5.6364 9.5038 1.6925 18 6 6.0819 9.5044 0.3772 19 9 7.1032 8.7006 0.0084 20 6 5.4746 10.3265 -0.5567 21 17 6.0254 10.3249 -2.2029 22 6 4.4319 11.1528 -0.1769 23 6 3.9917 11.1564 1.1337 24 6 4.5912 10.3342 2.0685 25 6 4.1091 10.3395 3.4963 26 8 5.0469 11.0434 4.3130 27 14 2.4501 11.1819 3.5885 28 6 6.0330 4.2718 -0.0029 29 6 5.4486 2.8573 -0.0010 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5139 -0.8899 32 1 -0.3634 -1.0276 0.0005 33 1 1.8933 -0.5138 -0.8900 34 1 1.8933 -0.5138 0.8900 35 1 2.3611 3.7417 1.2484 36 1 3.7859 3.1527 2.1381 37 1 3.6973 5.6304 0.3571 38 1 3.6979 5.6312 2.1369 39 1 7.2347 6.3765 1.2458 40 1 5.8096 6.9652 0.3562 41 1 3.9614 11.7965 -0.9054 42 1 3.1778 11.8028 1.4273 43 1 4.0159 9.3134 3.8520 44 1 4.8005 11.0863 5.2472 45 1 1.9491 11.1655 4.9863 46 1 2.5639 12.5818 3.1061 47 1 7.1215 4.2148 -0.0032 48 1 5.6964 4.8035 -0.8929 49 1 5.7846 2.3247 -0.8908 50 1 5.7845 2.3255 0.8892 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_18323490_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:02:21 Heat of formation + Delta-G solvation = -278.005058 kcal Electronic energy + Delta-G solvation = -44359.441928 eV Core-core repulsion = 38337.034560 eV Total energy + Delta-G solvation = -6022.407368 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 455.084 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -50.67315 -49.08152 -42.59329 -41.66016 -39.92698 -39.16407 -38.49385 -38.23915 -37.63999 -37.52150 -37.34688 -34.28269 -32.99109 -32.66626 -32.19082 -31.88725 -29.19882 -27.43001 -25.32051 -25.00674 -24.27428 -23.58055 -23.49135 -22.22120 -21.80540 -20.93487 -20.00835 -19.40951 -19.25865 -18.82480 -18.69220 -18.58802 -17.96133 -17.75212 -17.62613 -17.36803 -17.15641 -17.01715 -16.82167 -16.39501 -16.24537 -16.18327 -15.87626 -15.49096 -15.23747 -15.00768 -14.92821 -14.68021 -14.56125 -14.53521 -14.28219 -14.19686 -14.02327 -13.83294 -13.79275 -13.76289 -13.62053 -13.54569 -13.38660 -13.27924 -13.23851 -13.14600 -12.87597 -12.85702 -12.67822 -12.53611 -12.49446 -12.41049 -12.31012 -12.00020 -11.95118 -11.79276 -11.49633 -11.30401 -11.18474 -10.70311 -10.48820 -10.27511 -5.11467 -1.43882 -0.75924 -0.60741 0.36274 0.77449 1.01401 1.21031 1.39718 1.60075 1.62588 1.73240 2.15084 2.29907 2.51630 2.70557 2.83325 2.96261 3.06895 3.12078 3.23028 3.25585 3.40226 3.49059 3.55897 3.57144 3.69577 3.82239 3.88141 3.91839 3.94231 3.96248 3.99840 4.04011 4.13072 4.17225 4.25236 4.29673 4.35504 4.42212 4.43939 4.50574 4.57978 4.63971 4.70579 4.73342 4.80511 4.84123 4.89057 4.99640 4.99868 5.02340 5.15796 5.48848 6.23820 6.76719 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.356 6.356 4 C 0.466 3.534 5 O -0.503 6.503 6 C -0.082 4.082 7 H 0.115 0.885 8 C -0.111 4.111 9 C -0.169 4.169 10 C 0.137 3.863 11 F -0.189 7.189 12 C -0.683 4.683 13 S 2.584 3.416 14 O -0.937 6.937 15 O -0.898 6.898 16 O -0.643 6.643 17 C 0.067 3.933 18 C 0.098 3.902 19 F -0.110 7.110 20 C -0.059 4.059 21 Cl -0.019 7.019 22 C -0.054 4.054 23 C -0.097 4.097 24 C -0.005 4.005 25 C -0.104 4.104 26 O -0.529 6.529 27 Si 0.707 3.293 28 C -0.128 4.128 29 C -0.110 4.110 30 H 0.068 0.932 31 H 0.067 0.933 32 H 0.081 0.919 33 H 0.070 0.930 34 H 0.071 0.929 35 H 0.094 0.906 36 H 0.080 0.920 37 H 0.103 0.897 38 H 0.099 0.901 39 H 0.157 0.843 40 H 0.152 0.848 41 H 0.166 0.834 42 H 0.163 0.837 43 H 0.092 0.908 44 H 0.387 0.613 45 H -0.250 1.250 46 H -0.245 1.245 47 H 0.090 0.910 48 H 0.091 0.909 49 H 0.085 0.915 50 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.827 3.509 -4.959 9.139 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.273 6.273 4 C 0.309 3.691 5 O -0.390 6.390 6 C -0.101 4.101 7 H 0.133 0.867 8 C -0.149 4.149 9 C -0.207 4.207 10 C 0.117 3.883 11 F -0.169 7.169 12 C -0.809 4.809 13 S 2.678 3.322 14 O -0.936 6.936 15 O -0.896 6.896 16 O -0.601 6.601 17 C 0.023 3.977 18 C 0.076 3.924 19 F -0.088 7.088 20 C -0.087 4.087 21 Cl 0.010 6.990 22 C -0.073 4.073 23 C -0.115 4.115 24 C -0.008 4.008 25 C -0.212 4.212 26 O -0.337 6.337 27 Si 0.606 3.394 28 C -0.166 4.166 29 C -0.147 4.147 30 H 0.087 0.913 31 H 0.086 0.914 32 H 0.100 0.900 33 H 0.089 0.911 34 H 0.089 0.911 35 H 0.113 0.887 36 H 0.099 0.901 37 H 0.121 0.879 38 H 0.117 0.883 39 H 0.175 0.825 40 H 0.170 0.830 41 H 0.183 0.817 42 H 0.180 0.820 43 H 0.110 0.890 44 H 0.236 0.764 45 H -0.175 1.175 46 H -0.170 1.170 47 H 0.108 0.892 48 H 0.110 0.890 49 H 0.104 0.896 50 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -6.802 4.014 -4.554 9.117 hybrid contribution 1.766 -0.703 0.329 1.929 sum -5.035 3.311 -4.225 7.360 Atomic orbital electron populations 1.21820 0.92294 1.03264 1.03669 1.23086 0.95608 0.79833 1.02767 1.86495 1.24294 1.32769 1.83789 1.23604 0.80748 0.92427 0.72332 1.90696 1.60462 1.43059 1.44818 1.21173 0.96656 0.90216 1.02096 0.86738 1.21502 1.02415 0.94014 0.96928 1.22669 0.91731 0.99557 1.06706 1.20508 0.94971 0.87269 0.85514 1.92986 1.91162 1.81120 1.51673 1.31622 1.14989 1.09646 1.24607 1.06033 0.74926 0.74147 0.77081 1.93629 1.31819 1.81124 1.86987 1.93715 1.77868 1.75505 1.42553 1.85799 1.70070 1.42961 1.61279 1.17570 0.96784 0.99150 0.84177 1.17408 0.89190 0.94797 0.91019 1.91610 1.55577 1.69908 1.91677 1.20826 0.99398 1.00439 0.87994 1.98455 1.88736 1.97603 1.14214 1.21260 0.93215 0.96002 0.96836 1.21216 1.00566 0.97910 0.91824 1.19444 0.92346 0.93022 0.95978 1.25159 1.04235 1.03251 0.88578 1.86589 1.46739 1.77142 1.23227 0.94578 0.77932 0.80970 0.85946 1.22104 1.02703 0.95825 0.96007 1.21500 0.91676 0.96345 1.05203 0.91313 0.91364 0.90036 0.91126 0.91078 0.88737 0.90107 0.87895 0.88264 0.82470 0.82960 0.81670 0.81991 0.88985 0.76374 1.17472 1.16962 0.89174 0.89026 0.89617 0.89724 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.15 0.38 0.66 16 2 C 0.06 0.01 6.19 37.15 0.23 0.24 16 3 O -0.36 -0.46 10.12 -39.25 -0.40 -0.86 16 4 C 0.47 0.89 7.26 36.01 0.26 1.15 16 5 O -0.50 -2.50 15.73 -18.75 -0.29 -2.79 16 6 C -0.08 0.08 2.63 -91.77 -0.24 -0.17 16 7 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 8 C -0.11 0.12 5.01 -26.73 -0.13 -0.01 16 9 C -0.17 0.24 4.52 -26.73 -0.12 0.12 16 10 C 0.14 -0.03 0.88 -90.62 -0.08 -0.11 16 11 F -0.19 -0.54 15.04 2.25 0.03 -0.50 16 12 C -0.68 0.55 3.93 37.15 0.15 0.70 16 13 S 2.58 5.89 4.28 -107.50 -0.46 5.43 16 14 O -0.94 -1.30 11.85 -67.04 -0.79 -2.10 16 15 O -0.90 -5.52 17.60 -67.03 -1.18 -6.70 16 16 O -0.64 -1.80 9.34 -51.91 -0.48 -2.28 16 17 C 0.07 0.09 4.78 -39.18 -0.19 -0.10 16 18 C 0.10 0.00 6.31 -39.27 -0.25 -0.24 16 19 F -0.11 -0.01 14.29 2.25 0.03 0.03 16 20 C -0.06 0.09 6.32 -39.46 -0.25 -0.16 16 21 Cl -0.02 0.03 28.61 -51.86 -1.48 -1.46 16 22 C -0.05 0.19 9.83 -39.53 -0.39 -0.20 16 23 C -0.10 0.26 8.65 -39.60 -0.34 -0.09 16 24 C -0.01 0.00 4.71 -104.48 -0.49 -0.49 16 25 C -0.10 -0.04 2.22 36.01 0.08 0.04 16 26 O -0.53 -0.66 12.86 -35.23 -0.45 -1.12 16 27 Si 0.71 -1.58 30.20 -169.99 -5.13 -6.71 16 28 C -0.13 0.24 5.00 -26.71 -0.13 0.10 16 29 C -0.11 0.05 4.37 -26.71 -0.12 -0.07 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 31 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 33 H 0.07 0.02 8.13 -51.93 -0.42 -0.41 16 34 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 35 H 0.09 -0.21 8.11 -51.93 -0.42 -0.63 16 36 H 0.08 0.01 7.80 -51.93 -0.41 -0.40 16 37 H 0.10 -0.41 8.14 -51.93 -0.42 -0.84 16 38 H 0.10 -0.08 5.46 -51.93 -0.28 -0.36 16 39 H 0.16 -0.31 8.14 -51.92 -0.42 -0.73 16 40 H 0.15 -0.52 6.12 -51.92 -0.32 -0.83 16 41 H 0.17 -1.08 8.06 -52.49 -0.42 -1.50 16 42 H 0.16 -0.80 4.89 -52.49 -0.26 -1.05 16 43 H 0.09 0.06 5.42 -51.93 -0.28 -0.22 16 44 H 0.39 -1.07 8.74 45.56 0.40 -0.67 16 45 H -0.25 0.04 7.11 56.52 0.40 0.45 16 46 H -0.24 0.31 6.75 56.52 0.38 0.69 16 47 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 48 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 49 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 50 H 0.08 0.11 7.76 -51.93 -0.40 -0.29 16 LS Contribution 428.56 15.07 6.46 6.46 Total: 0.00 -10.79 428.56 -12.05 -22.84 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -6.26 Total: -11.63 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: -1.63 Total: 1.39 kcal Atomic # 8 Polarization: -12.25 SS G_CDS: -3.60 Total: -15.85 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.07 Total: -0.48 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.13 Total: -6.71 kcal Atomic # 16 Polarization: 5.89 SS G_CDS: -0.46 Total: 5.43 kcal Atomic # 17 Polarization: 0.03 SS G_CDS: -1.48 Total: -1.46 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -10.79 -12.05 -22.84 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_18323490_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -255.163 kcal (2) G-P(sol) polarization free energy of solvation -10.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -265.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.049 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.842 kcal (6) G-S(sol) free energy of system = (1) + (5) -278.005 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds