Wall clock time and date at job start Mon Mar 8 2021 10:02:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.45199 * 109.47482 * 2 1 4 4 C 1.34228 * 117.00436 * 180.02562 * 3 2 1 5 5 O 1.20826 * 120.00050 * 359.97438 * 4 3 2 6 6 C 1.50701 * 120.00108 * 179.97438 * 4 3 2 7 7 H 1.08992 * 109.47284 * 300.00185 * 6 4 3 8 8 C 1.53002 * 109.46958 * 60.00103 * 6 4 3 9 9 C 1.52997 * 109.46978 * 180.02562 * 8 6 4 10 10 C 1.53006 * 109.47164 * 299.99874 * 9 8 6 11 11 F 1.39900 * 109.46764 * 300.00189 * 10 9 8 12 12 C 1.52992 * 109.47223 * 180.02562 * 10 9 8 13 13 S 1.81400 * 109.47583 * 59.99628 * 12 10 9 14 14 O 1.42098 * 110.54210 * 291.62608 * 13 12 10 15 15 O 1.42102 * 110.53978 * 68.37524 * 13 12 10 16 16 O 1.52197 * 104.45232 * 180.02562 * 13 12 10 17 17 C 1.35951 * 114.00091 * 74.99967 * 16 13 12 18 18 C 1.38873 * 120.05792 * 269.72327 * 17 16 13 19 19 F 1.35097 * 120.05155 * 0.02562 * 18 17 16 20 20 C 1.38443 * 119.89546 * 179.79085 * 18 17 16 21 21 Cl 1.73597 * 119.99572 * 180.23476 * 20 18 17 22 22 C 1.38363 * 120.00723 * 0.46194 * 20 18 17 23 23 C 1.38256 * 120.11002 * 359.79759 * 22 20 18 24 24 C 1.38178 * 120.10785 * 359.96724 * 23 22 20 25 25 C 1.50701 * 120.00470 * 180.02562 * 24 23 22 26 26 O 1.42897 * 109.46834 * 254.97882 * 25 24 23 27 27 Si 1.86293 * 109.47174 * 14.98140 * 25 24 23 28 28 C 1.52997 * 109.47127 * 59.99836 * 10 9 8 29 29 C 1.52996 * 109.46990 * 179.97438 * 6 4 3 30 30 H 1.09006 * 109.47020 * 299.99915 * 1 2 3 31 31 H 1.09001 * 109.47508 * 59.99424 * 1 2 3 32 32 H 1.08999 * 109.47442 * 180.02562 * 1 2 3 33 33 H 1.09006 * 109.47020 * 240.00085 * 2 1 3 34 34 H 1.09001 * 109.47526 * 120.00019 * 2 1 3 35 35 H 1.09002 * 109.47097 * 299.99808 * 8 6 4 36 36 H 1.09001 * 109.47142 * 59.99773 * 8 6 4 37 37 H 1.09001 * 109.47375 * 59.99908 * 9 8 6 38 38 H 1.09000 * 109.47140 * 179.97438 * 9 8 6 39 39 H 1.09002 * 109.47103 * 179.97438 * 12 10 9 40 40 H 1.09001 * 109.47066 * 299.99881 * 12 10 9 41 41 H 1.07997 * 119.94486 * 179.76405 * 22 20 18 42 42 H 1.08001 * 119.94689 * 179.97438 * 23 22 20 43 43 H 1.09001 * 109.46537 * 134.98210 * 25 24 23 44 44 H 0.96711 * 113.99836 * 180.02562 * 26 25 24 45 45 H 1.48498 * 110.00208 * 178.67703 * 27 25 24 46 46 H 1.48499 * 109.99971 * 300.00129 * 27 25 24 47 47 H 1.09002 * 109.47153 * 180.02562 * 28 10 9 48 48 H 1.09001 * 109.46832 * 60.00321 * 28 10 9 49 49 H 1.09004 * 109.47368 * 60.00232 * 29 6 4 50 50 H 1.09001 * 109.47372 * 300.00388 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9207 2.9374 -0.0012 7 1 3.5845 3.4693 -0.8911 8 6 3.4496 3.6847 1.2481 9 6 4.0339 5.0987 1.2471 10 6 5.5619 5.0192 1.2463 11 9 5.9939 4.3368 2.3886 12 6 6.1462 6.4331 1.2460 13 16 5.5876 7.3187 2.7273 14 8 4.1916 7.5751 2.6582 15 8 6.1724 6.7569 3.8942 16 8 6.2276 8.6947 2.6113 17 6 5.6364 9.5038 1.6925 18 6 6.0819 9.5044 0.3772 19 9 7.1032 8.7006 0.0084 20 6 5.4746 10.3265 -0.5567 21 17 6.0254 10.3249 -2.2029 22 6 4.4319 11.1528 -0.1769 23 6 3.9917 11.1564 1.1337 24 6 4.5912 10.3342 2.0685 25 6 4.1091 10.3395 3.4963 26 8 5.0469 11.0434 4.3130 27 14 2.4501 11.1819 3.5885 28 6 6.0330 4.2718 -0.0029 29 6 5.4486 2.8573 -0.0010 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5139 -0.8899 32 1 -0.3634 -1.0276 0.0005 33 1 1.8933 -0.5138 -0.8900 34 1 1.8933 -0.5138 0.8900 35 1 2.3611 3.7417 1.2484 36 1 3.7859 3.1527 2.1381 37 1 3.6973 5.6304 0.3571 38 1 3.6979 5.6312 2.1369 39 1 7.2347 6.3765 1.2458 40 1 5.8096 6.9652 0.3562 41 1 3.9614 11.7965 -0.9054 42 1 3.1778 11.8028 1.4273 43 1 4.0159 9.3134 3.8520 44 1 4.8005 11.0863 5.2472 45 1 1.9491 11.1655 4.9863 46 1 2.5639 12.5818 3.1061 47 1 7.1215 4.2148 -0.0032 48 1 5.6964 4.8035 -0.8929 49 1 5.7846 2.3247 -0.8908 50 1 5.7845 2.3255 0.8892 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_18323490_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:02:19 Heat of formation + Delta-G solvation = -277.387394 kcal Electronic energy + Delta-G solvation = -44359.415144 eV Core-core repulsion = 38337.034560 eV Total energy + Delta-G solvation = -6022.380584 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 455.084 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -50.60136 -49.16434 -42.58144 -41.77759 -39.84309 -39.14050 -38.63011 -38.18492 -37.68826 -37.59766 -37.44326 -34.27189 -32.87412 -32.61389 -32.09138 -31.75234 -29.15801 -27.34466 -25.27847 -24.94683 -24.17969 -23.55089 -23.41075 -22.23046 -21.81334 -20.89064 -20.06091 -19.43920 -19.24793 -18.79055 -18.75556 -18.56508 -17.98411 -17.77722 -17.70697 -17.30740 -17.15255 -17.04272 -16.76546 -16.33709 -16.19481 -16.17635 -15.84182 -15.48209 -15.25951 -15.00122 -14.91095 -14.55165 -14.53284 -14.49083 -14.23827 -14.16180 -14.05365 -13.82471 -13.73724 -13.72114 -13.58493 -13.49801 -13.45392 -13.22577 -13.21099 -13.17563 -12.90545 -12.75890 -12.65218 -12.50225 -12.37612 -12.29450 -12.20773 -11.99297 -11.83417 -11.74819 -11.54992 -11.36149 -11.15676 -10.65358 -10.36178 -10.14436 -4.92665 -1.47571 -0.61687 -0.52456 0.43830 0.81643 1.07937 1.15458 1.56800 1.60319 1.77567 1.88237 2.11319 2.37705 2.49785 2.70977 2.96325 3.06202 3.20055 3.23292 3.33684 3.38453 3.49781 3.53296 3.64715 3.70212 3.77650 3.92964 3.96276 3.97783 4.02344 4.04943 4.05707 4.12311 4.24681 4.30623 4.32109 4.40880 4.51552 4.56601 4.61399 4.63871 4.76495 4.77026 4.81844 4.89258 4.90686 4.92981 4.99146 5.09169 5.14243 5.17327 5.22763 5.43851 6.39312 6.64451 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.053 3.947 3 O -0.356 6.356 4 C 0.465 3.535 5 O -0.542 6.542 6 C -0.077 4.077 7 H 0.150 0.850 8 C -0.109 4.109 9 C -0.172 4.172 10 C 0.124 3.876 11 F -0.214 7.214 12 C -0.668 4.668 13 S 2.578 3.422 14 O -0.935 6.935 15 O -0.955 6.955 16 O -0.658 6.658 17 C 0.038 3.962 18 C 0.090 3.910 19 F -0.114 7.114 20 C -0.060 4.060 21 Cl -0.018 7.018 22 C -0.035 4.035 23 C -0.090 4.090 24 C -0.025 4.025 25 C -0.134 4.134 26 O -0.553 6.553 27 Si 0.794 3.206 28 C -0.123 4.123 29 C -0.109 4.109 30 H 0.069 0.931 31 H 0.072 0.928 32 H 0.094 0.906 33 H 0.068 0.932 34 H 0.063 0.937 35 H 0.108 0.892 36 H 0.057 0.943 37 H 0.139 0.861 38 H 0.089 0.911 39 H 0.167 0.833 40 H 0.183 0.817 41 H 0.203 0.797 42 H 0.189 0.811 43 H 0.078 0.922 44 H 0.398 0.602 45 H -0.285 1.285 46 H -0.247 1.247 47 H 0.092 0.908 48 H 0.126 0.874 49 H 0.087 0.913 50 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.672 5.566 -7.862 12.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.020 4.020 3 O -0.273 6.273 4 C 0.309 3.691 5 O -0.432 6.432 6 C -0.096 4.096 7 H 0.168 0.832 8 C -0.147 4.147 9 C -0.209 4.209 10 C 0.104 3.896 11 F -0.194 7.194 12 C -0.797 4.797 13 S 2.676 3.324 14 O -0.934 6.934 15 O -0.953 6.953 16 O -0.617 6.617 17 C -0.005 4.005 18 C 0.068 3.932 19 F -0.092 7.092 20 C -0.088 4.088 21 Cl 0.011 6.989 22 C -0.054 4.054 23 C -0.107 4.107 24 C -0.027 4.027 25 C -0.240 4.240 26 O -0.363 6.363 27 Si 0.693 3.307 28 C -0.161 4.161 29 C -0.147 4.147 30 H 0.088 0.912 31 H 0.091 0.909 32 H 0.112 0.888 33 H 0.086 0.914 34 H 0.081 0.919 35 H 0.126 0.874 36 H 0.076 0.924 37 H 0.157 0.843 38 H 0.108 0.892 39 H 0.185 0.815 40 H 0.201 0.799 41 H 0.220 0.780 42 H 0.205 0.795 43 H 0.096 0.904 44 H 0.249 0.751 45 H -0.212 1.212 46 H -0.172 1.172 47 H 0.110 0.890 48 H 0.144 0.856 49 H 0.105 0.895 50 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -8.643 6.076 -7.429 12.915 hybrid contribution 2.351 -1.350 1.225 2.975 sum -6.291 4.726 -6.204 10.020 Atomic orbital electron populations 1.21819 0.90492 1.04214 1.03908 1.23246 0.97041 0.79445 1.02307 1.86505 1.24022 1.33315 1.83427 1.24236 0.80653 0.93179 0.71030 1.90678 1.61227 1.44514 1.46743 1.21285 0.96062 0.88706 1.03514 0.83242 1.21484 1.03219 0.94040 0.95952 1.22779 0.90729 0.99414 1.08019 1.20904 0.95994 0.87311 0.85365 1.92944 1.91501 1.81710 1.53281 1.31522 1.15673 1.09030 1.23457 1.06012 0.74842 0.74069 0.77473 1.93606 1.31520 1.81031 1.87217 1.93644 1.78801 1.76708 1.46141 1.85765 1.70344 1.43344 1.62225 1.17928 0.98040 1.00022 0.84529 1.17513 0.89400 0.95418 0.90891 1.91590 1.55856 1.70133 1.91640 1.20977 0.99721 1.00391 0.87706 1.98460 1.88853 1.97592 1.14012 1.21705 0.91746 0.94875 0.97029 1.21527 1.00566 0.97092 0.91558 1.19738 0.92774 0.93788 0.96443 1.25719 1.06222 1.03230 0.88795 1.86538 1.48170 1.77251 1.24365 0.93651 0.74600 0.78895 0.83568 1.22153 1.02867 0.94849 0.96278 1.21465 0.92249 0.97097 1.03909 0.91210 0.90896 0.88761 0.91362 0.91884 0.87359 0.92386 0.84308 0.89243 0.81533 0.79914 0.77975 0.79460 0.90368 0.75085 1.21166 1.17240 0.88979 0.85586 0.89451 0.92567 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.58 10.29 71.98 0.74 1.32 16 2 C 0.05 0.06 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.01 10.12 -51.40 -0.52 -1.53 16 4 C 0.46 2.10 7.26 71.24 0.52 2.62 16 5 O -0.54 -6.35 15.73 21.96 0.35 -6.00 16 6 C -0.08 0.18 2.63 -11.54 -0.03 0.15 16 7 H 0.15 -1.38 8.14 -2.39 -0.02 -1.40 16 8 C -0.11 0.23 5.01 30.59 0.15 0.38 16 9 C -0.17 0.58 4.52 30.60 0.14 0.72 16 10 C 0.12 -0.03 0.88 -10.79 -0.01 -0.04 16 11 F -0.21 -1.73 15.04 44.97 0.68 -1.06 16 12 C -0.67 1.01 3.93 71.98 0.28 1.29 16 13 S 2.58 16.70 4.28 -56.49 -0.24 16.46 16 14 O -0.94 -3.85 11.85 -118.57 -1.41 -5.26 16 15 O -0.95 -15.27 17.60 -118.57 -2.09 -17.36 16 16 O -0.66 -5.00 9.34 -62.09 -0.58 -5.58 16 17 C 0.04 0.12 4.78 22.53 0.11 0.23 16 18 C 0.09 -0.05 6.31 22.47 0.14 0.09 16 19 F -0.11 0.04 14.29 44.97 0.64 0.68 16 20 C -0.06 0.30 6.32 22.35 0.14 0.44 16 21 Cl -0.02 0.09 28.61 -2.72 -0.08 0.01 16 22 C -0.03 0.35 9.83 22.30 0.22 0.57 16 23 C -0.09 0.67 8.65 22.26 0.19 0.86 16 24 C -0.02 -0.01 4.71 -19.77 -0.09 -0.10 16 25 C -0.13 -0.21 2.22 71.24 0.16 -0.05 16 26 O -0.55 -2.29 12.86 -148.98 -1.92 -4.20 16 27 Si 0.79 -4.18 30.20 68.60 2.07 -2.10 16 28 C -0.12 0.57 5.00 30.61 0.15 0.72 16 29 C -0.11 0.06 4.37 30.61 0.13 0.19 16 30 H 0.07 -0.27 8.14 -2.38 -0.02 -0.29 16 31 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 32 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 33 H 0.07 0.10 8.13 -2.38 -0.02 0.08 16 34 H 0.06 0.15 8.13 -2.39 -0.02 0.14 16 35 H 0.11 -0.54 8.11 -2.39 -0.02 -0.56 16 36 H 0.06 0.14 7.80 -2.39 -0.02 0.12 16 37 H 0.14 -1.51 8.14 -2.39 -0.02 -1.53 16 38 H 0.09 -0.09 5.46 -2.39 -0.01 -0.10 16 39 H 0.17 -0.56 8.14 -2.39 -0.02 -0.58 16 40 H 0.18 -1.51 6.12 -2.39 -0.01 -1.52 16 41 H 0.20 -3.55 8.06 -2.91 -0.02 -3.58 16 42 H 0.19 -2.45 4.89 -2.91 -0.01 -2.46 16 43 H 0.08 0.27 5.42 -2.39 -0.01 0.25 16 44 H 0.40 -1.37 8.74 -74.05 -0.65 -2.02 16 45 H -0.29 -0.04 7.11 99.48 0.71 0.67 16 46 H -0.25 1.21 6.75 99.48 0.67 1.88 16 47 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 48 H 0.13 -1.43 8.14 -2.39 -0.02 -1.45 16 49 H 0.09 -0.08 8.10 -2.39 -0.02 -0.10 16 50 H 0.06 0.29 7.76 -2.39 -0.02 0.27 16 Total: 0.00 -30.36 428.56 0.68 -29.68 By element: Atomic # 1 Polarization: -14.00 SS G_CDS: 0.38 Total: -13.62 kcal Atomic # 6 Polarization: 6.50 SS G_CDS: 3.39 Total: 9.89 kcal Atomic # 8 Polarization: -33.77 SS G_CDS: -6.16 Total: -39.94 kcal Atomic # 9 Polarization: -1.70 SS G_CDS: 1.32 Total: -0.38 kcal Atomic # 14 Polarization: -4.18 SS G_CDS: 2.07 Total: -2.10 kcal Atomic # 16 Polarization: 16.70 SS G_CDS: -0.24 Total: 16.46 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -0.08 Total: 0.01 kcal Total: -30.36 0.68 -29.68 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_18323490_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -247.711 kcal (2) G-P(sol) polarization free energy of solvation -30.360 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -278.071 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.684 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.676 kcal (6) G-S(sol) free energy of system = (1) + (5) -277.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds