Wall clock time and date at job start Mon Mar 8 2021 10:05:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45193 * 109.47188 * 2 1 4 4 C 1.34237 * 117.00153 * 179.97438 * 3 2 1 5 5 O 1.20829 * 119.99609 * 0.02562 * 4 3 2 6 6 C 1.50695 * 120.00051 * 180.02562 * 4 3 2 7 7 H 1.09003 * 112.84990 * 311.19685 * 6 4 3 8 8 C 1.53780 * 113.61626 * 82.50622 * 6 4 3 9 9 C 1.53775 * 87.08323 * 139.98155 * 8 6 4 10 10 F 1.39897 * 113.69396 * 89.12940 * 9 8 6 11 11 C 1.53003 * 113.61257 * 220.01968 * 9 8 6 12 12 S 1.81393 * 109.47107 * 282.49648 * 11 9 8 13 13 O 1.42105 * 110.54383 * 291.62058 * 12 11 9 14 14 O 1.42097 * 110.54458 * 68.37838 * 12 11 9 15 15 O 1.52208 * 104.44935 * 180.02562 * 12 11 9 16 16 C 1.35952 * 114.00110 * 76.84563 * 15 12 11 17 17 C 1.38875 * 120.05605 * 275.39452 * 16 15 12 18 18 F 1.35101 * 120.05093 * 0.02562 * 17 16 15 19 19 C 1.38442 * 119.89401 * 179.77059 * 17 16 15 20 20 Cl 1.73597 * 119.99663 * 180.27680 * 19 17 16 21 21 C 1.38357 * 120.00355 * 0.48672 * 19 17 16 22 22 C 1.38254 * 120.11880 * 359.78657 * 21 19 17 23 23 C 1.38182 * 120.10130 * 359.96119 * 22 21 19 24 24 C 1.50699 * 120.00330 * 180.02562 * 23 22 21 25 25 O 1.42896 * 109.47363 * 104.04725 * 24 23 22 26 26 Si 1.86302 * 109.47332 * 344.04094 * 24 23 22 27 27 C 1.53781 * 113.61226 * 180.02562 * 6 4 3 28 28 H 1.08998 * 109.47322 * 60.00024 * 1 2 3 29 29 H 1.09003 * 109.47461 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.46871 * 299.99643 * 1 2 3 31 31 H 1.09004 * 109.46958 * 239.99841 * 2 1 3 32 32 H 1.09005 * 109.47339 * 120.00364 * 2 1 3 33 33 H 1.09001 * 113.61118 * 25.42634 * 8 6 4 34 34 H 1.09006 * 113.61207 * 254.53090 * 8 6 4 35 35 H 1.09005 * 109.46826 * 162.49452 * 11 9 8 36 36 H 1.09002 * 109.47303 * 42.49764 * 11 9 8 37 37 H 1.08003 * 119.94472 * 179.76826 * 21 19 17 38 38 H 1.07991 * 119.95132 * 179.97438 * 22 21 19 39 39 H 1.09009 * 109.46772 * 224.04575 * 24 23 22 40 40 H 0.96697 * 113.99793 * 180.02562 * 25 24 23 41 41 H 1.48506 * 109.99776 * 60.00061 * 26 24 23 42 42 H 1.48492 * 110.00379 * 181.32038 * 26 24 23 43 43 H 1.09005 * 113.61391 * 105.47632 * 27 6 4 44 44 H 1.09000 * 113.69397 * 334.57994 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9373 0.0012 7 1 3.4714 3.5816 -0.7547 8 6 3.9859 3.5764 1.3983 9 6 5.3561 4.1421 0.9896 10 9 5.2850 5.3932 0.3677 11 6 6.3979 4.0935 2.1091 12 16 6.0848 5.4385 3.2852 13 8 6.3536 6.6983 2.6852 14 8 4.8759 5.2083 3.9957 15 8 7.1741 5.2844 4.3371 16 6 8.3943 5.7331 3.9395 17 6 9.2352 4.9051 3.2074 18 9 8.8418 3.6526 2.8888 19 6 10.4751 5.3672 2.8001 20 17 11.5254 4.3369 1.8787 21 6 10.8788 6.6485 3.1311 22 6 10.0443 7.4711 3.8647 23 6 8.8037 7.0165 4.2692 24 6 7.8955 7.9152 5.0683 25 8 6.8565 8.4148 4.2240 26 14 8.8791 9.3416 5.7531 27 6 5.4582 2.9680 0.0011 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 1.8933 -0.5139 -0.8900 32 1 1.8933 -0.5139 0.8900 33 1 4.0376 2.8495 2.2089 34 1 3.2287 4.3430 1.5636 35 1 7.3947 4.2080 1.6830 36 1 6.3316 3.1361 2.6259 37 1 11.8478 7.0066 2.8161 38 1 10.3624 8.4705 4.1219 39 1 7.4557 7.3495 5.8898 40 1 6.2333 9.0022 4.6730 41 1 9.4840 10.1207 4.6430 42 1 8.0016 10.2181 6.5696 43 1 5.8894 3.2436 -0.9614 44 1 5.9141 2.0752 0.4291 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_18323490_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:05:25 Heat of formation + Delta-G solvation = -231.995187 kcal Electronic energy + Delta-G solvation = -39319.840205 eV Core-core repulsion = 33610.503214 eV Total energy + Delta-G solvation = -5709.336992 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.053 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -50.72056 -49.28712 -42.52145 -41.92868 -39.83197 -39.42869 -38.53841 -38.14056 -37.62085 -37.53381 -37.32865 -32.91163 -32.84705 -32.08378 -31.75255 -27.41575 -27.28994 -27.02007 -25.15758 -24.01456 -23.40179 -22.61570 -21.87186 -20.96196 -19.93573 -19.49031 -19.39165 -18.93926 -18.69248 -18.54751 -18.11029 -17.79310 -17.71768 -17.58652 -17.04611 -16.99693 -16.45463 -16.31060 -16.20206 -16.08423 -15.81350 -15.50729 -15.34664 -14.80783 -14.71903 -14.54176 -14.43488 -14.29224 -14.13107 -14.01133 -13.78646 -13.73034 -13.66156 -13.53960 -13.38760 -13.34682 -13.15501 -13.01452 -12.99788 -12.77887 -12.58126 -12.50743 -12.38386 -12.27130 -11.96373 -11.83510 -11.62349 -11.58097 -11.48591 -10.59382 -10.37431 -10.16300 -4.92505 -1.45510 -0.63450 -0.50471 0.45896 0.83475 0.91232 1.16893 1.48475 1.60468 1.77931 1.94725 2.16840 2.32424 2.54273 2.57194 2.66315 2.82572 3.01227 3.06467 3.08987 3.25823 3.34634 3.46513 3.62322 3.72633 3.76052 3.92790 3.95891 3.99134 4.00669 4.01765 4.22279 4.26227 4.28227 4.32598 4.40506 4.52693 4.55138 4.60556 4.64176 4.74956 4.77260 4.85681 4.93303 5.08032 5.15696 5.34552 6.51070 6.52765 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.477 3.523 5 O -0.529 6.529 6 C -0.105 4.105 7 H 0.155 0.845 8 C -0.153 4.153 9 C 0.096 3.904 10 F -0.182 7.182 11 C -0.671 4.671 12 S 2.578 3.422 13 O -0.915 6.915 14 O -0.946 6.946 15 O -0.657 6.657 16 C 0.046 3.954 17 C 0.078 3.922 18 F -0.114 7.114 19 C -0.061 4.061 20 Cl -0.021 7.021 21 C -0.041 4.041 22 C -0.089 4.089 23 C -0.025 4.025 24 C -0.134 4.134 25 O -0.530 6.530 26 Si 0.798 3.202 27 C -0.115 4.115 28 H 0.068 0.932 29 H 0.098 0.902 30 H 0.068 0.932 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.123 0.877 34 H 0.112 0.888 35 H 0.164 0.836 36 H 0.182 0.818 37 H 0.201 0.799 38 H 0.189 0.811 39 H 0.087 0.913 40 H 0.390 0.610 41 H -0.261 1.261 42 H -0.286 1.286 43 H 0.113 0.887 44 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.910 1.547 1.898 5.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.321 3.679 5 O -0.418 6.418 6 C -0.124 4.124 7 H 0.172 0.828 8 C -0.190 4.190 9 C 0.076 3.924 10 F -0.162 7.162 11 C -0.798 4.798 12 S 2.674 3.326 13 O -0.913 6.913 14 O -0.944 6.944 15 O -0.615 6.615 16 C 0.002 3.998 17 C 0.056 3.944 18 F -0.092 7.092 19 C -0.089 4.089 20 Cl 0.008 6.992 21 C -0.059 4.059 22 C -0.106 4.106 23 C -0.027 4.027 24 C -0.240 4.240 25 O -0.339 6.339 26 Si 0.698 3.302 27 C -0.153 4.153 28 H 0.087 0.913 29 H 0.116 0.884 30 H 0.087 0.913 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.142 0.858 34 H 0.131 0.869 35 H 0.182 0.818 36 H 0.200 0.800 37 H 0.218 0.782 38 H 0.205 0.795 39 H 0.105 0.895 40 H 0.240 0.760 41 H -0.187 1.187 42 H -0.213 1.213 43 H 0.132 0.868 44 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 5.175 2.053 1.887 5.878 hybrid contribution -1.635 -1.207 -0.764 2.171 sum 3.540 0.846 1.123 3.809 Atomic orbital electron populations 1.21839 0.90742 1.04347 1.03736 1.23314 0.96935 0.79052 1.02776 1.86529 1.23955 1.33837 1.83248 1.23575 0.80769 0.92233 0.71342 1.90674 1.61040 1.43717 1.46416 1.22564 0.97426 0.91111 1.01255 0.82762 1.23914 0.95885 1.02190 0.97050 1.21325 0.95695 0.81997 0.93376 1.92981 1.97081 1.42378 1.83755 1.31590 1.10348 1.23795 1.14060 1.06033 0.74401 0.76741 0.75387 1.93761 1.82433 1.37418 1.77721 1.93615 1.43193 1.87064 1.70501 1.85751 1.29033 1.84537 1.62189 1.17833 0.83158 0.94458 1.04309 1.17596 0.94394 0.80948 1.01450 1.91554 1.90335 1.36816 1.90530 1.20993 0.90917 0.95434 1.01531 1.98454 1.63508 1.66357 1.70883 1.21688 1.02072 0.88821 0.93360 1.21555 0.91050 1.02104 0.95930 1.19750 0.96083 0.90604 0.96279 1.25595 0.95828 1.06779 0.95764 1.86918 1.40877 1.67884 1.38194 0.94057 0.82787 0.73864 0.79482 1.23600 0.93566 0.97153 1.00999 0.91252 0.88387 0.91329 0.91050 0.91106 0.85848 0.86939 0.81812 0.79999 0.78236 0.79468 0.89496 0.76005 1.18672 1.21282 0.86808 0.85815 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.41 10.29 71.98 0.74 1.15 16 2 C 0.05 0.08 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.61 10.22 -51.48 -0.53 -2.14 16 4 C 0.48 2.36 7.48 71.23 0.53 2.90 16 5 O -0.53 -5.22 15.65 21.96 0.34 -4.87 16 6 C -0.10 -0.04 4.24 -11.02 -0.05 -0.09 16 7 H 0.15 -0.48 8.14 -2.39 -0.02 -0.50 16 8 C -0.15 -0.20 6.90 31.12 0.21 0.02 16 9 C 0.10 0.24 1.57 -10.25 -0.02 0.22 16 10 F -0.18 -1.19 16.51 44.97 0.74 -0.45 16 11 C -0.67 -1.29 4.21 71.98 0.30 -0.99 16 12 S 2.58 21.89 4.93 -56.49 -0.28 21.61 16 13 O -0.91 -11.16 12.99 -115.09 -1.50 -12.66 16 14 O -0.95 -12.56 17.96 -118.57 -2.13 -14.68 16 15 O -0.66 -4.63 9.24 -62.10 -0.57 -5.20 16 16 C 0.05 0.20 4.65 22.53 0.10 0.30 16 17 C 0.08 0.15 6.47 22.47 0.15 0.30 16 18 F -0.11 -0.21 13.36 44.97 0.60 0.39 16 19 C -0.06 0.12 6.32 22.35 0.14 0.26 16 20 Cl -0.02 0.04 28.61 -2.72 -0.08 -0.04 16 21 C -0.04 0.29 9.82 22.30 0.22 0.51 16 22 C -0.09 0.50 8.65 22.26 0.19 0.69 16 23 C -0.02 -0.03 4.94 -19.77 -0.10 -0.13 16 24 C -0.13 -0.06 2.36 71.24 0.17 0.11 16 25 O -0.53 -2.80 9.75 -126.43 -1.23 -4.04 16 26 Si 0.80 -4.74 30.24 68.60 2.07 -2.67 16 27 C -0.11 0.03 6.86 31.13 0.21 0.25 16 28 H 0.07 -0.19 8.14 -2.39 -0.02 -0.20 16 29 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 30 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.07 0.10 8.13 -2.38 -0.02 0.08 16 32 H 0.07 0.11 8.13 -2.38 -0.02 0.09 16 33 H 0.12 -0.05 7.99 -2.39 -0.02 -0.07 16 34 H 0.11 0.06 8.14 -2.38 -0.02 0.04 16 35 H 0.16 -0.04 5.52 -2.39 -0.01 -0.06 16 36 H 0.18 -0.57 8.05 -2.39 -0.02 -0.59 16 37 H 0.20 -2.92 8.06 -2.91 -0.02 -2.94 16 38 H 0.19 -2.12 4.91 -2.91 -0.01 -2.13 16 39 H 0.09 -0.07 7.80 -2.38 -0.02 -0.09 16 40 H 0.39 -0.81 8.74 -74.06 -0.65 -1.45 16 41 H -0.26 0.88 6.72 99.48 0.67 1.55 16 42 H -0.29 0.16 7.11 99.48 0.71 0.87 16 43 H 0.11 -0.31 8.14 -2.38 -0.02 -0.33 16 44 H 0.12 -0.06 7.40 -2.39 -0.02 -0.08 16 Total: 0.00 -26.48 397.83 1.16 -25.33 By element: Atomic # 1 Polarization: -7.05 SS G_CDS: 0.45 Total: -6.61 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: 3.26 Total: 6.03 kcal Atomic # 8 Polarization: -37.98 SS G_CDS: -5.61 Total: -43.59 kcal Atomic # 9 Polarization: -1.41 SS G_CDS: 1.34 Total: -0.06 kcal Atomic # 14 Polarization: -4.74 SS G_CDS: 2.07 Total: -2.67 kcal Atomic # 16 Polarization: 21.89 SS G_CDS: -0.28 Total: 21.61 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -0.08 Total: -0.04 kcal Total: -26.48 1.16 -25.33 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_18323490_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -206.668 kcal (2) G-P(sol) polarization free energy of solvation -26.483 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -233.151 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.156 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.328 kcal (6) G-S(sol) free energy of system = (1) + (5) -231.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds