Wall clock time and date at job start Mon Mar 8 2021 10:34:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42903 * 114.00082 * 2 1 4 4 C 1.53000 * 112.84776 * 294.14101 * 3 2 1 5 5 F 1.39902 * 109.47014 * 196.20608 * 4 3 2 6 6 F 1.39893 * 109.47089 * 316.20262 * 4 3 2 7 7 F 1.39898 * 109.47110 * 76.20753 * 4 3 2 8 8 C 1.54047 * 113.68845 * 162.86372 * 3 2 1 9 9 C 1.53774 * 86.98891 * 270.87380 * 8 3 2 10 10 H 1.09001 * 113.61698 * 219.98070 * 9 8 3 11 11 C 1.53007 * 113.61272 * 89.16346 * 9 8 3 12 12 S 1.81394 * 109.47248 * 87.81890 * 11 9 8 13 13 O 1.42104 * 110.54273 * 71.57576 * 12 11 9 14 14 O 1.42100 * 110.54411 * 294.82491 * 12 11 9 15 15 O 1.52202 * 104.44960 * 183.19737 * 12 11 9 16 16 C 1.35950 * 113.99555 * 76.28201 * 15 12 11 17 17 C 1.38867 * 120.05542 * 270.80422 * 16 15 12 18 18 F 1.35102 * 120.05390 * 359.96012 * 17 16 15 19 19 C 1.38443 * 119.89573 * 180.23226 * 17 16 15 20 20 Cl 1.73599 * 119.99676 * 179.75043 * 19 17 16 21 21 C 1.38358 * 120.00699 * 359.47766 * 19 17 16 22 22 C 1.38254 * 120.11116 * 0.54438 * 21 19 17 23 23 C 1.38182 * 120.10270 * 359.70851 * 22 21 19 24 24 C 1.50701 * 120.00106 * 180.02562 * 23 22 21 25 25 O 1.42903 * 109.46972 * 255.70172 * 24 23 22 26 26 Si 1.86303 * 109.47400 * 15.70169 * 24 23 22 27 27 C 1.53785 * 113.61369 * 65.33423 * 3 2 1 28 28 H 1.08993 * 109.46808 * 305.24884 * 1 2 3 29 29 H 1.09004 * 109.46314 * 65.24932 * 1 2 3 30 30 H 1.09003 * 109.46823 * 185.24405 * 1 2 3 31 31 H 1.09006 * 113.60948 * 156.37024 * 8 3 2 32 32 H 1.08999 * 113.69849 * 25.39477 * 8 3 2 33 33 H 1.08999 * 109.47064 * 327.81812 * 11 9 8 34 34 H 1.08999 * 109.46725 * 207.81911 * 11 9 8 35 35 H 1.08004 * 119.95015 * 180.27577 * 21 19 17 36 36 H 1.08004 * 119.95132 * 179.72283 * 22 21 19 37 37 H 1.09005 * 109.47241 * 135.70496 * 24 23 22 38 38 H 0.96703 * 113.99924 * 65.10289 * 25 24 23 39 39 H 1.48501 * 109.99811 * 179.97438 * 26 24 23 40 40 H 1.48497 * 109.99758 * 301.32183 * 26 24 23 41 41 H 1.08997 * 113.61428 * 334.65403 * 27 3 2 42 42 H 1.08993 * 113.68920 * 203.76068 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 1.7252 2.0827 -1.2866 5 9 2.6036 3.1675 -1.3806 6 9 1.9043 1.2408 -2.3894 7 9 0.4069 2.5507 -1.2663 8 6 3.4935 1.3225 0.4156 9 6 3.0020 1.4824 1.8639 10 1 3.5987 2.1786 2.4533 11 6 2.7619 0.1518 2.5801 12 16 4.3037 -0.4027 3.3584 13 8 4.6158 0.4102 4.4814 14 8 5.2831 -0.6960 2.3716 15 8 3.9594 -1.7577 3.9601 16 6 3.8842 -2.7641 3.0491 17 6 2.6797 -3.0399 2.4154 18 9 1.5806 -2.3090 2.7036 19 6 2.6056 -4.0685 1.4918 20 17 1.0997 -4.4197 0.7027 21 6 3.7330 -4.8130 1.1934 22 6 4.9322 -4.5391 1.8245 23 6 5.0101 -3.5168 2.7509 24 6 6.3186 -3.2197 3.4370 25 8 6.2784 -3.7183 4.7756 26 14 7.7078 -4.0439 2.5087 27 6 1.7237 2.1074 1.2805 28 1 -0.3633 0.5931 0.8392 29 1 -0.3632 0.4303 -0.9333 30 1 -0.3633 -1.0234 0.0939 31 1 4.0416 2.1878 0.0425 32 1 4.0110 0.3810 0.2316 33 1 2.4304 -0.5947 1.8583 34 1 1.9960 0.2836 3.3443 35 1 3.6752 -5.6125 0.4694 36 1 5.8096 -5.1248 1.5929 37 1 6.4828 -2.1423 3.4554 38 1 6.2131 -4.6813 4.8348 39 1 9.0037 -3.7580 3.1751 40 1 7.4792 -5.5100 2.4491 41 1 0.8131 1.7990 1.7942 42 1 1.7881 3.1869 1.1448 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_18323490_17541816.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:34:39 Heat of formation + Delta-G solvation = -295.010682 kcal Electronic energy + Delta-G solvation = -42474.158746 eV Core-core repulsion = 36270.089578 eV Total energy + Delta-G solvation = -6204.069167 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 435.034 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -51.19504 -50.62124 -48.74125 -48.62639 -42.54940 -41.58808 -39.90407 -38.42957 -38.26629 -37.56036 -37.48702 -37.26198 -32.84374 -31.97801 -31.78087 -28.57020 -27.92198 -27.38485 -26.98399 -25.19415 -23.77965 -23.53487 -22.19151 -20.87329 -20.11489 -19.83361 -19.50581 -19.44771 -19.19955 -19.08723 -18.79047 -17.97531 -17.70327 -17.37618 -17.30726 -17.05363 -16.65019 -16.50452 -16.11003 -15.99124 -15.91224 -15.70403 -15.53266 -15.51124 -15.28120 -15.18677 -15.07682 -14.89876 -14.80846 -14.75200 -14.46154 -14.38622 -14.13031 -14.03364 -13.83647 -13.45652 -13.41029 -13.33632 -13.24423 -13.23094 -13.10897 -12.75939 -12.53184 -12.45218 -12.37903 -12.33210 -12.19678 -11.87306 -11.58297 -10.93564 -10.91047 -10.44721 -10.23261 -5.08003 -1.34863 -0.71248 -0.53782 0.43008 0.85861 1.03086 1.36444 1.50788 1.66190 1.79316 1.92965 2.24147 2.38581 2.47645 2.56784 2.65260 2.73573 2.93859 3.01163 3.06650 3.13643 3.23747 3.28559 3.34639 3.43565 3.46899 3.71327 3.91253 4.00346 4.03266 4.05201 4.15054 4.22901 4.27116 4.32898 4.35557 4.41597 4.44441 4.47251 4.56942 4.57871 4.61730 4.70506 5.04431 5.56142 6.22780 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.331 6.331 3 C 0.041 3.959 4 C 0.438 3.562 5 F -0.174 7.174 6 F -0.173 7.173 7 F -0.181 7.181 8 C -0.123 4.123 9 C -0.091 4.091 10 H 0.110 0.890 11 C -0.643 4.643 12 S 2.581 3.419 13 O -0.913 6.913 14 O -0.939 6.939 15 O -0.645 6.645 16 C 0.071 3.929 17 C 0.102 3.898 18 F -0.108 7.108 19 C -0.055 4.055 20 Cl -0.021 7.021 21 C -0.055 4.055 22 C -0.104 4.104 23 C -0.053 4.053 24 C -0.100 4.100 25 O -0.516 6.516 26 Si 0.710 3.290 27 C -0.137 4.137 28 H 0.056 0.944 29 H 0.054 0.946 30 H 0.101 0.899 31 H 0.126 0.874 32 H 0.109 0.891 33 H 0.153 0.847 34 H 0.149 0.851 35 H 0.163 0.837 36 H 0.162 0.838 37 H 0.129 0.871 38 H 0.376 0.624 39 H -0.246 1.246 40 H -0.249 1.249 41 H 0.099 0.901 42 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.616 -3.426 -3.293 4.792 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.248 6.248 3 C -0.002 4.002 4 C 0.383 3.617 5 F -0.155 7.155 6 F -0.154 7.154 7 F -0.163 7.163 8 C -0.160 4.160 9 C -0.111 4.111 10 H 0.128 0.872 11 C -0.769 4.769 12 S 2.676 3.324 13 O -0.911 6.911 14 O -0.937 6.937 15 O -0.603 6.603 16 C 0.028 3.972 17 C 0.080 3.920 18 F -0.087 7.087 19 C -0.083 4.083 20 Cl 0.009 6.991 21 C -0.075 4.075 22 C -0.122 4.122 23 C -0.056 4.056 24 C -0.208 4.208 25 O -0.322 6.322 26 Si 0.609 3.391 27 C -0.176 4.176 28 H 0.075 0.925 29 H 0.073 0.927 30 H 0.120 0.880 31 H 0.144 0.856 32 H 0.128 0.872 33 H 0.171 0.829 34 H 0.167 0.833 35 H 0.181 0.819 36 H 0.179 0.821 37 H 0.146 0.854 38 H 0.224 0.776 39 H -0.170 1.170 40 H -0.173 1.173 41 H 0.117 0.883 42 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 0.623 -3.536 -2.731 4.511 hybrid contribution -2.166 0.199 0.490 2.229 sum -1.543 -3.337 -2.242 4.306 Atomic orbital electron populations 1.23143 0.79356 1.04376 1.01616 1.88045 1.21232 1.21740 1.93822 1.23989 0.99612 0.86515 0.90061 1.21117 0.74365 0.78733 0.87453 1.93184 1.69053 1.56735 1.96572 1.93222 1.94898 1.70748 1.56528 1.93196 1.36760 1.89478 1.96816 1.23519 0.91548 1.06929 0.94000 1.21701 0.99420 0.93987 0.95966 0.87229 1.30962 1.23812 1.08083 1.14075 1.06049 0.77100 0.74147 0.75077 1.93691 1.82243 1.65869 1.49280 1.93634 1.56180 1.80775 1.63107 1.85797 1.90761 1.33763 1.49973 1.17510 0.92950 0.93766 0.92981 1.17429 0.82682 0.93838 0.98066 1.91596 1.50469 1.74597 1.91991 1.20807 0.91384 0.97773 0.98356 1.98448 1.28848 1.93815 1.78033 1.21248 0.89568 0.98201 0.98448 1.21246 0.99047 0.96722 0.95213 1.20534 0.95219 0.94014 0.95853 1.25427 0.99556 1.07408 0.88449 1.86744 1.95501 1.26741 1.23167 0.94291 0.76791 0.79184 0.88818 1.23589 0.99274 1.01057 0.93659 0.92530 0.92734 0.88020 0.85557 0.87240 0.82899 0.83334 0.81898 0.82103 0.85362 0.77602 1.16963 1.17350 0.88302 0.86751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.29 101.05 1.04 1.02 16 2 O -0.33 0.08 8.37 -35.23 -0.29 -0.22 16 3 C 0.04 -0.03 0.85 -89.67 -0.08 -0.10 16 4 C 0.44 0.31 2.52 37.16 0.09 0.40 16 5 F -0.17 -0.12 15.82 2.25 0.04 -0.09 16 6 F -0.17 -0.39 17.10 2.25 0.04 -0.35 16 7 F -0.18 -0.19 15.42 2.25 0.03 -0.16 16 8 C -0.12 0.19 6.91 -25.78 -0.18 0.01 16 9 C -0.09 0.16 3.84 -89.81 -0.34 -0.18 16 10 H 0.11 -0.34 8.12 -51.93 -0.42 -0.76 16 11 C -0.64 0.62 4.41 37.16 0.16 0.79 16 12 S 2.58 4.99 4.89 -107.50 -0.53 4.47 16 13 O -0.91 -4.83 18.09 -67.04 -1.21 -6.04 16 14 O -0.94 -1.83 14.37 -67.04 -0.96 -2.80 16 15 O -0.64 -1.66 9.32 -51.91 -0.48 -2.15 16 16 C 0.07 0.09 4.75 -39.19 -0.19 -0.10 16 17 C 0.10 0.03 6.37 -39.27 -0.25 -0.22 16 18 F -0.11 -0.03 14.04 2.25 0.03 0.00 16 19 C -0.06 0.06 6.32 -39.46 -0.25 -0.19 16 20 Cl -0.02 0.02 28.61 -51.86 -1.48 -1.46 16 21 C -0.06 0.18 9.83 -39.53 -0.39 -0.21 16 22 C -0.10 0.31 8.65 -39.60 -0.34 -0.03 16 23 C -0.05 0.01 4.70 -104.48 -0.49 -0.48 16 24 C -0.10 -0.06 2.26 36.01 0.08 0.02 16 25 O -0.52 -0.73 12.93 -35.23 -0.46 -1.18 16 26 Si 0.71 -1.42 30.19 -169.99 -5.13 -6.56 16 27 C -0.14 0.32 6.50 -25.91 -0.17 0.15 16 28 H 0.06 -0.15 6.55 -51.93 -0.34 -0.49 16 29 H 0.05 -0.06 6.73 -51.93 -0.35 -0.41 16 30 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.13 -0.37 7.02 -51.93 -0.36 -0.73 16 32 H 0.11 -0.16 8.07 -51.93 -0.42 -0.58 16 33 H 0.15 -0.17 3.72 -51.92 -0.19 -0.36 16 34 H 0.15 -0.41 8.14 -51.92 -0.42 -0.83 16 35 H 0.16 -0.99 8.06 -52.48 -0.42 -1.42 16 36 H 0.16 -0.88 4.87 -52.48 -0.26 -1.13 16 37 H 0.13 0.23 5.57 -51.93 -0.29 -0.05 16 38 H 0.38 -1.04 8.61 45.56 0.39 -0.65 16 39 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 40 H -0.25 0.60 6.66 56.52 0.38 0.97 16 41 H 0.10 -0.31 6.63 -51.93 -0.34 -0.65 16 42 H 0.11 -0.39 8.06 -51.93 -0.42 -0.81 16 LS Contribution 379.41 15.07 5.72 5.72 Total: 0.00 -8.92 379.41 -9.49 -18.40 By element: Atomic # 1 Polarization: -4.98 SS G_CDS: -3.49 Total: -8.47 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -1.30 Total: 0.88 kcal Atomic # 8 Polarization: -8.98 SS G_CDS: -3.41 Total: -12.39 kcal Atomic # 9 Polarization: -0.73 SS G_CDS: 0.14 Total: -0.59 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.13 Total: -6.56 kcal Atomic # 16 Polarization: 4.99 SS G_CDS: -0.53 Total: 4.47 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -1.48 Total: -1.46 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -8.92 -9.49 -18.40 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_18323490_17541816.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -276.608 kcal (2) G-P(sol) polarization free energy of solvation -8.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -285.526 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.485 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.403 kcal (6) G-S(sol) free energy of system = (1) + (5) -295.011 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds