Wall clock time and date at job start Mon Mar 8 2021 10:34:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42903 * 114.00082 * 2 1 4 4 C 1.53000 * 112.84776 * 294.14101 * 3 2 1 5 5 F 1.39902 * 109.47014 * 196.20608 * 4 3 2 6 6 F 1.39893 * 109.47089 * 316.20262 * 4 3 2 7 7 F 1.39898 * 109.47110 * 76.20753 * 4 3 2 8 8 C 1.54047 * 113.68845 * 162.86372 * 3 2 1 9 9 C 1.53774 * 86.98891 * 270.87380 * 8 3 2 10 10 H 1.09001 * 113.61698 * 219.98070 * 9 8 3 11 11 C 1.53007 * 113.61272 * 89.16346 * 9 8 3 12 12 S 1.81394 * 109.47248 * 87.81890 * 11 9 8 13 13 O 1.42104 * 110.54273 * 71.57576 * 12 11 9 14 14 O 1.42100 * 110.54411 * 294.82491 * 12 11 9 15 15 O 1.52202 * 104.44960 * 183.19737 * 12 11 9 16 16 C 1.35950 * 113.99555 * 76.28201 * 15 12 11 17 17 C 1.38867 * 120.05542 * 270.80422 * 16 15 12 18 18 F 1.35102 * 120.05390 * 359.96012 * 17 16 15 19 19 C 1.38443 * 119.89573 * 180.23226 * 17 16 15 20 20 Cl 1.73599 * 119.99676 * 179.75043 * 19 17 16 21 21 C 1.38358 * 120.00699 * 359.47766 * 19 17 16 22 22 C 1.38254 * 120.11116 * 0.54438 * 21 19 17 23 23 C 1.38182 * 120.10270 * 359.70851 * 22 21 19 24 24 C 1.50701 * 120.00106 * 180.02562 * 23 22 21 25 25 O 1.42903 * 109.46972 * 255.70172 * 24 23 22 26 26 Si 1.86303 * 109.47400 * 15.70169 * 24 23 22 27 27 C 1.53785 * 113.61369 * 65.33423 * 3 2 1 28 28 H 1.08993 * 109.46808 * 305.24884 * 1 2 3 29 29 H 1.09004 * 109.46314 * 65.24932 * 1 2 3 30 30 H 1.09003 * 109.46823 * 185.24405 * 1 2 3 31 31 H 1.09006 * 113.60948 * 156.37024 * 8 3 2 32 32 H 1.08999 * 113.69849 * 25.39477 * 8 3 2 33 33 H 1.08999 * 109.47064 * 327.81812 * 11 9 8 34 34 H 1.08999 * 109.46725 * 207.81911 * 11 9 8 35 35 H 1.08004 * 119.95015 * 180.27577 * 21 19 17 36 36 H 1.08004 * 119.95132 * 179.72283 * 22 21 19 37 37 H 1.09005 * 109.47241 * 135.70496 * 24 23 22 38 38 H 0.96703 * 113.99924 * 65.10289 * 25 24 23 39 39 H 1.48501 * 109.99811 * 179.97438 * 26 24 23 40 40 H 1.48497 * 109.99758 * 301.32183 * 26 24 23 41 41 H 1.08997 * 113.61428 * 334.65403 * 27 3 2 42 42 H 1.08993 * 113.68920 * 203.76068 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 1.7252 2.0827 -1.2866 5 9 2.6036 3.1675 -1.3806 6 9 1.9043 1.2408 -2.3894 7 9 0.4069 2.5507 -1.2663 8 6 3.4935 1.3225 0.4156 9 6 3.0020 1.4824 1.8639 10 1 3.5987 2.1786 2.4533 11 6 2.7619 0.1518 2.5801 12 16 4.3037 -0.4027 3.3584 13 8 4.6158 0.4102 4.4814 14 8 5.2831 -0.6960 2.3716 15 8 3.9594 -1.7577 3.9601 16 6 3.8842 -2.7641 3.0491 17 6 2.6797 -3.0399 2.4154 18 9 1.5806 -2.3090 2.7036 19 6 2.6056 -4.0685 1.4918 20 17 1.0997 -4.4197 0.7027 21 6 3.7330 -4.8130 1.1934 22 6 4.9322 -4.5391 1.8245 23 6 5.0101 -3.5168 2.7509 24 6 6.3186 -3.2197 3.4370 25 8 6.2784 -3.7183 4.7756 26 14 7.7078 -4.0439 2.5087 27 6 1.7237 2.1074 1.2805 28 1 -0.3633 0.5931 0.8392 29 1 -0.3632 0.4303 -0.9333 30 1 -0.3633 -1.0234 0.0939 31 1 4.0416 2.1878 0.0425 32 1 4.0110 0.3810 0.2316 33 1 2.4304 -0.5947 1.8583 34 1 1.9960 0.2836 3.3443 35 1 3.6752 -5.6125 0.4694 36 1 5.8096 -5.1248 1.5929 37 1 6.4828 -2.1423 3.4554 38 1 6.2131 -4.6813 4.8348 39 1 9.0037 -3.7580 3.1751 40 1 7.4792 -5.5100 2.4491 41 1 0.8131 1.7990 1.7942 42 1 1.7881 3.1869 1.1448 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_18323490_17541816.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:34:37 Heat of formation + Delta-G solvation = -294.998147 kcal Electronic energy + Delta-G solvation = -42474.158202 eV Core-core repulsion = 36270.089578 eV Total energy + Delta-G solvation = -6204.068624 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 435.034 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -51.25076 -50.57127 -48.78600 -48.71598 -42.54194 -41.47239 -39.83984 -38.58719 -38.23844 -37.54752 -37.44166 -37.31127 -32.75041 -31.90868 -31.67950 -28.44320 -27.88418 -27.32690 -26.82851 -25.11036 -23.72937 -23.46012 -22.18561 -20.79721 -20.14960 -19.83730 -19.54869 -19.46629 -19.19872 -19.08552 -18.74744 -18.00508 -17.66953 -17.27770 -17.22701 -17.05252 -16.53860 -16.44585 -16.08646 -15.95472 -15.88926 -15.67637 -15.59601 -15.49668 -15.28323 -15.14700 -15.05605 -14.90417 -14.84938 -14.76131 -14.39946 -14.32461 -14.06957 -14.04033 -13.80226 -13.57678 -13.45987 -13.27913 -13.24412 -13.18467 -12.98704 -12.67040 -12.39607 -12.35971 -12.26956 -12.23354 -12.14287 -11.76205 -11.49027 -10.86344 -10.84649 -10.33236 -10.12343 -4.91097 -1.37675 -0.58615 -0.46945 0.49659 0.87198 1.13825 1.50888 1.51598 1.82130 1.92393 2.04726 2.23003 2.42216 2.53286 2.58009 2.62396 2.81645 3.06161 3.10910 3.14649 3.27917 3.29420 3.37538 3.43384 3.49313 3.60920 3.81400 4.02820 4.12977 4.16805 4.22372 4.29899 4.39945 4.44337 4.44996 4.49930 4.59812 4.62637 4.64265 4.72669 4.74506 4.79311 4.84893 5.19879 5.68368 6.41953 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.340 6.340 3 C 0.037 3.963 4 C 0.435 3.565 5 F -0.175 7.175 6 F -0.185 7.185 7 F -0.184 7.184 8 C -0.128 4.128 9 C -0.098 4.098 10 H 0.122 0.878 11 C -0.627 4.627 12 S 2.578 3.422 13 O -0.959 6.959 14 O -0.947 6.947 15 O -0.659 6.659 16 C 0.044 3.956 17 C 0.091 3.909 18 F -0.114 7.114 19 C -0.061 4.061 20 Cl -0.023 7.023 21 C -0.040 4.040 22 C -0.092 4.092 23 C -0.064 4.064 24 C -0.127 4.127 25 O -0.542 6.542 26 Si 0.788 3.212 27 C -0.131 4.131 28 H 0.068 0.932 29 H 0.047 0.953 30 H 0.109 0.891 31 H 0.139 0.861 32 H 0.106 0.894 33 H 0.158 0.842 34 H 0.166 0.834 35 H 0.199 0.801 36 H 0.193 0.807 37 H 0.105 0.895 38 H 0.392 0.608 39 H -0.297 1.297 40 H -0.224 1.224 41 H 0.109 0.891 42 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.009 -4.838 -4.595 6.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.258 6.258 3 C -0.005 4.005 4 C 0.380 3.620 5 F -0.157 7.157 6 F -0.166 7.166 7 F -0.166 7.166 8 C -0.165 4.165 9 C -0.118 4.118 10 H 0.140 0.860 11 C -0.756 4.756 12 S 2.677 3.323 13 O -0.957 6.957 14 O -0.945 6.945 15 O -0.618 6.618 16 C 0.001 3.999 17 C 0.069 3.931 18 F -0.092 7.092 19 C -0.089 4.089 20 Cl 0.007 6.993 21 C -0.059 4.059 22 C -0.109 4.109 23 C -0.067 4.067 24 C -0.233 4.233 25 O -0.351 6.351 26 Si 0.687 3.313 27 C -0.169 4.169 28 H 0.087 0.913 29 H 0.066 0.934 30 H 0.128 0.872 31 H 0.157 0.843 32 H 0.124 0.876 33 H 0.175 0.825 34 H 0.184 0.816 35 H 0.216 0.784 36 H 0.209 0.791 37 H 0.122 0.878 38 H 0.242 0.758 39 H -0.224 1.224 40 H -0.148 1.148 41 H 0.128 0.872 42 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 0.213 -4.963 -4.017 6.389 hybrid contribution -2.069 0.652 0.885 2.343 sum -1.856 -4.311 -3.132 5.642 Atomic orbital electron populations 1.23262 0.78831 1.05146 1.01798 1.88035 1.21902 1.22077 1.93807 1.24117 1.00113 0.86523 0.89771 1.21406 0.74180 0.78718 0.87679 1.93177 1.69063 1.56823 1.96599 1.93192 1.94961 1.71132 1.57332 1.93186 1.37023 1.89531 1.96828 1.23650 0.91359 1.07400 0.94117 1.21812 1.00248 0.93727 0.95984 0.85984 1.30833 1.21749 1.08702 1.14336 1.05994 0.78090 0.73741 0.74486 1.93626 1.83678 1.67155 1.51257 1.93601 1.57439 1.80714 1.62752 1.85755 1.90918 1.34305 1.50810 1.17869 0.94047 0.94208 0.93813 1.17560 0.82321 0.94522 0.98708 1.91570 1.50600 1.74865 1.92148 1.21006 0.92023 0.97752 0.98162 1.98448 1.29213 1.93743 1.77945 1.21691 0.88362 0.97894 0.97937 1.21568 1.00232 0.95546 0.93584 1.20687 0.94423 0.94916 0.96707 1.25874 1.01823 1.06855 0.88718 1.86689 1.95797 1.28346 1.24289 0.93467 0.71875 0.78729 0.87261 1.23661 0.99253 1.01657 0.92375 0.91305 0.93399 0.87232 0.84342 0.87558 0.82453 0.81620 0.78404 0.79055 0.87756 0.75824 1.22446 1.14809 0.87245 0.85374 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.02 10.29 113.37 1.17 1.15 16 2 O -0.34 0.18 8.37 -148.98 -1.25 -1.07 16 3 C 0.04 -0.06 0.85 -10.18 -0.01 -0.07 16 4 C 0.43 0.64 2.52 71.98 0.18 0.82 16 5 F -0.18 -0.24 15.82 44.97 0.71 0.47 16 6 F -0.18 -0.92 17.10 44.97 0.77 -0.15 16 7 F -0.18 -0.39 15.42 44.97 0.69 0.31 16 8 C -0.13 0.37 6.91 31.21 0.22 0.58 16 9 C -0.10 0.34 3.84 -10.27 -0.04 0.30 16 10 H 0.12 -0.73 8.12 -2.39 -0.02 -0.75 16 11 C -0.63 0.80 4.41 71.98 0.32 1.12 16 12 S 2.58 15.35 4.89 -56.49 -0.28 15.07 16 13 O -0.96 -12.93 18.09 -118.57 -2.15 -15.07 16 14 O -0.95 -5.68 14.37 -118.57 -1.70 -7.38 16 15 O -0.66 -4.91 9.32 -62.08 -0.58 -5.49 16 16 C 0.04 0.15 4.75 22.53 0.11 0.26 16 17 C 0.09 0.08 6.37 22.47 0.14 0.23 16 18 F -0.11 -0.14 14.04 44.97 0.63 0.49 16 19 C -0.06 0.19 6.32 22.35 0.14 0.33 16 20 Cl -0.02 0.06 28.61 -2.72 -0.08 -0.01 16 21 C -0.04 0.35 9.83 22.30 0.22 0.57 16 22 C -0.09 0.73 8.65 22.26 0.19 0.92 16 23 C -0.06 0.01 4.70 -19.77 -0.09 -0.08 16 24 C -0.13 -0.29 2.26 71.24 0.16 -0.13 16 25 O -0.54 -2.41 12.93 -148.98 -1.93 -4.33 16 26 Si 0.79 -3.65 30.19 68.60 2.07 -1.58 16 27 C -0.13 0.70 6.50 31.12 0.20 0.90 16 28 H 0.07 -0.42 6.55 -2.39 -0.02 -0.43 16 29 H 0.05 -0.10 6.73 -2.38 -0.02 -0.11 16 30 H 0.11 -0.58 8.14 -2.39 -0.02 -0.60 16 31 H 0.14 -0.80 7.02 -2.38 -0.02 -0.82 16 32 H 0.11 -0.24 8.07 -2.39 -0.02 -0.26 16 33 H 0.16 -0.26 3.72 -2.39 -0.01 -0.27 16 34 H 0.17 -0.85 8.14 -2.39 -0.02 -0.87 16 35 H 0.20 -3.17 8.06 -2.91 -0.02 -3.19 16 36 H 0.19 -2.78 4.87 -2.91 -0.01 -2.79 16 37 H 0.10 0.67 5.57 -2.38 -0.01 0.66 16 38 H 0.39 -1.89 8.61 -74.06 -0.64 -2.53 16 39 H -0.30 -1.12 7.11 99.48 0.71 -0.41 16 40 H -0.22 1.87 6.66 99.48 0.66 2.53 16 41 H 0.11 -0.81 6.63 -2.39 -0.02 -0.83 16 42 H 0.13 -1.02 8.06 -2.39 -0.02 -1.04 16 Total: 0.00 -23.87 379.41 0.34 -23.53 By element: Atomic # 1 Polarization: -12.21 SS G_CDS: 0.51 Total: -11.70 kcal Atomic # 6 Polarization: 4.01 SS G_CDS: 2.91 Total: 6.92 kcal Atomic # 8 Polarization: -25.74 SS G_CDS: -7.60 Total: -33.34 kcal Atomic # 9 Polarization: -1.69 SS G_CDS: 2.81 Total: 1.12 kcal Atomic # 14 Polarization: -3.65 SS G_CDS: 2.07 Total: -1.58 kcal Atomic # 16 Polarization: 15.35 SS G_CDS: -0.28 Total: 15.07 kcal Atomic # 17 Polarization: 0.06 SS G_CDS: -0.08 Total: -0.01 kcal Total: -23.87 0.34 -23.53 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_18323490_17541816.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -271.468 kcal (2) G-P(sol) polarization free energy of solvation -23.869 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -295.337 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.339 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.530 kcal (6) G-S(sol) free energy of system = (1) + (5) -294.998 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds