Wall clock time and date at job start Mon Mar 8 2021 11:26:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34227 * 116.99597 * 2 1 4 4 O 1.20829 * 120.00185 * 359.97438 * 3 2 1 5 5 C 1.50709 * 120.00026 * 179.97438 * 3 2 1 6 6 N 1.46501 * 112.84524 * 321.90056 * 5 3 2 7 7 S 1.65593 * 120.00058 * 288.84137 * 6 5 3 8 8 O 1.42100 * 106.40644 * 312.07858 * 7 6 5 9 9 O 1.42104 * 106.40218 * 179.15880 * 7 6 5 10 10 C 1.76199 * 107.21655 * 65.62200 * 7 6 5 11 11 C 1.33396 * 122.53782 * 257.73224 * 10 7 6 12 12 C 1.50694 * 125.20608 * 359.97438 * 11 10 7 13 13 S 1.75890 * 109.59122 * 180.23929 * 11 10 7 14 14 C 1.75888 * 90.96894 * 359.73767 * 13 11 10 15 15 C 1.50701 * 125.20304 * 180.02562 * 14 13 11 16 16 C 1.33383 * 109.59690 * 359.97438 * 14 13 11 17 17 C 1.50705 * 122.54249 * 180.02562 * 16 14 13 18 18 O 1.42904 * 109.46644 * 291.83219 * 17 16 14 19 19 Si 1.86294 * 109.47045 * 51.83201 * 17 16 14 20 20 C 1.53779 * 113.61424 * 190.70280 * 5 3 2 21 21 C 1.53782 * 87.08115 * 219.93411 * 20 5 3 22 22 O 1.42892 * 113.61638 * 270.80257 * 21 20 5 23 23 C 1.53003 * 113.61167 * 139.97902 * 21 20 5 24 24 F 1.39902 * 109.46958 * 60.00788 * 23 21 20 25 25 F 1.39895 * 109.46730 * 180.02562 * 23 21 20 26 26 F 1.39895 * 109.47420 * 300.00216 * 23 21 20 27 27 C 1.53776 * 87.07861 * 25.43474 * 21 20 5 28 28 H 1.09001 * 109.46407 * 180.02562 * 1 2 3 29 29 H 1.08994 * 109.47386 * 299.99949 * 1 2 3 30 30 H 1.08997 * 109.46655 * 60.00436 * 1 2 3 31 31 H 0.96997 * 119.99735 * 108.85130 * 6 5 3 32 32 H 1.08996 * 109.46966 * 180.33096 * 12 11 10 33 33 H 1.09007 * 109.47149 * 300.33188 * 12 11 10 34 34 H 1.09001 * 109.47127 * 60.33086 * 12 11 10 35 35 H 1.09003 * 109.46947 * 264.93993 * 15 14 13 36 36 H 1.09005 * 109.46894 * 24.92866 * 15 14 13 37 37 H 1.08996 * 109.47636 * 144.93365 * 15 14 13 38 38 H 1.09001 * 109.47222 * 171.83570 * 17 16 14 39 39 H 0.96694 * 114.00086 * 56.26479 * 18 17 16 40 40 H 1.48498 * 110.00362 * 65.48003 * 19 17 16 41 41 H 1.48501 * 110.00075 * 186.80094 * 19 17 16 42 42 H 1.09002 * 113.61821 * 334.48372 * 20 5 3 43 43 H 1.09006 * 113.61162 * 105.38601 * 20 5 3 44 44 H 0.96702 * 114.00423 * 179.97438 * 22 21 20 45 45 H 1.08998 * 113.61666 * 220.01547 * 27 21 20 46 46 H 1.09006 * 113.61989 * 89.11517 * 27 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1897 0.2440 0.8341 7 16 4.0788 0.3342 2.4838 8 8 4.4231 1.6668 2.8370 9 8 4.7574 -0.8052 2.9945 10 6 2.3798 0.1311 2.9042 11 6 1.5956 1.1574 3.2377 12 6 2.0315 2.5984 3.3033 13 16 -0.0232 0.5705 3.5965 14 6 0.4687 -1.0835 3.2558 15 6 -0.4278 -2.2918 3.3423 16 6 1.7563 -1.1047 2.9082 17 6 2.4792 -2.3785 2.5531 18 8 2.6085 -3.1938 3.7196 19 14 1.5117 -3.3004 1.2552 20 6 4.1088 2.6899 0.2622 21 6 5.1739 2.3942 -0.8070 22 8 6.3588 1.7914 -0.2832 23 6 5.4675 3.5827 -1.7247 24 9 5.9311 4.6587 -0.9602 25 9 6.4429 3.2199 -2.6597 26 9 4.2969 3.9558 -2.3936 27 6 4.1798 1.3849 -1.4052 28 1 -0.3632 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8899 30 1 -0.3632 0.5138 -0.8900 31 1 4.6675 -0.4914 0.4195 32 1 1.1890 3.2194 3.6076 33 1 2.8391 2.7011 4.0282 34 1 2.3818 2.9171 2.3215 35 1 -0.3127 -2.7603 4.3198 36 1 -1.4649 -1.9851 3.2064 37 1 -0.1543 -3.0037 2.5636 38 1 3.4695 -2.1384 2.1660 39 1 1.7679 -3.3990 4.1512 40 1 1.4828 -2.5192 -0.0073 41 1 2.1246 -4.6316 1.0149 42 1 3.4155 3.4825 -0.0196 43 1 4.5198 2.8218 1.2632 44 1 7.0323 1.6026 -0.9509 45 1 4.6481 0.4631 -1.7505 46 1 3.5059 1.8205 -2.1429 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_18364790_15065288.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:26:31 Heat of formation + Delta-G solvation = -290.233236 kcal Electronic energy + Delta-G solvation = -46095.227806 eV Core-core repulsion = 39986.362337 eV Total energy + Delta-G solvation = -6108.865469 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 446.065 amu Computer time = 2.97 seconds Orbital eigenvalues (eV) -51.30938 -48.86152 -48.74205 -42.59624 -40.73776 -40.31591 -38.53537 -37.74012 -37.15309 -36.99143 -36.91771 -34.32844 -34.00066 -31.07466 -29.70267 -28.60655 -28.11211 -27.71755 -26.06020 -25.66516 -23.27192 -22.64055 -21.60922 -20.87081 -20.35803 -20.16068 -19.63758 -19.59068 -19.13832 -18.93784 -18.66475 -18.23151 -17.95625 -17.54607 -17.39569 -16.96888 -16.50586 -16.20716 -16.02490 -15.88596 -15.73172 -15.61484 -15.38491 -15.29645 -15.20734 -15.13313 -14.94269 -14.90180 -14.74475 -14.67557 -14.52964 -14.32973 -14.26945 -14.18029 -14.02553 -13.86568 -13.73452 -13.52065 -13.43914 -13.22678 -13.08133 -13.02790 -12.92100 -12.74642 -12.67784 -12.33498 -12.11762 -11.96615 -11.92859 -11.84984 -11.77895 -11.61542 -10.93505 -10.48128 -10.03439 -9.52199 -4.99566 -0.90320 -0.51320 0.29559 0.59011 0.66953 0.82486 1.13202 1.28079 1.50441 1.62183 1.70980 1.99063 2.11041 2.29411 2.39914 2.50454 2.55629 2.76808 3.07098 3.20654 3.28144 3.34174 3.39923 3.48394 3.60206 3.78163 3.86545 3.93134 3.97152 3.98190 4.02961 4.08746 4.15699 4.16531 4.22139 4.31287 4.42119 4.47672 4.50855 4.53727 4.64752 4.76205 4.89084 5.02447 5.09442 5.12023 5.52197 5.94050 6.38858 6.55164 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.336 6.336 3 C 0.454 3.546 4 O -0.480 6.480 5 C 0.168 3.832 6 N -1.080 6.080 7 S 2.702 3.298 8 O -0.941 6.941 9 O -0.931 6.931 10 C -0.688 4.688 11 C -0.046 4.046 12 C -0.114 4.114 13 S 0.169 5.831 14 C -0.201 4.201 15 C -0.082 4.082 16 C -0.047 4.047 17 C -0.062 4.062 18 O -0.522 6.522 19 Si 0.633 3.367 20 C -0.135 4.135 21 C 0.072 3.928 22 O -0.499 6.499 23 C 0.438 3.562 24 F -0.168 7.168 25 F -0.179 7.179 26 F -0.171 7.171 27 C -0.138 4.138 28 H 0.104 0.896 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.429 0.571 32 H 0.080 0.920 33 H 0.111 0.889 34 H 0.094 0.906 35 H 0.092 0.908 36 H 0.087 0.913 37 H 0.084 0.916 38 H 0.118 0.882 39 H 0.370 0.630 40 H -0.223 1.223 41 H -0.244 1.244 42 H 0.137 0.863 43 H 0.150 0.850 44 H 0.394 0.606 45 H 0.116 0.884 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.262 -2.311 -2.383 7.087 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.251 6.251 3 C 0.293 3.707 4 O -0.365 6.365 5 C 0.075 3.925 6 N -0.840 5.840 7 S 2.790 3.210 8 O -0.931 6.931 9 O -0.921 6.921 10 C -0.788 4.788 11 C -0.167 4.167 12 C -0.172 4.172 13 S 0.435 5.565 14 C -0.319 4.319 15 C -0.138 4.138 16 C -0.058 4.058 17 C -0.175 4.175 18 O -0.327 6.327 19 Si 0.531 3.469 20 C -0.172 4.172 21 C 0.027 3.973 22 O -0.306 6.306 23 C 0.383 3.617 24 F -0.149 7.149 25 F -0.160 7.160 26 F -0.153 7.153 27 C -0.177 4.177 28 H 0.122 0.878 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.266 0.734 32 H 0.098 0.902 33 H 0.129 0.871 34 H 0.113 0.887 35 H 0.110 0.890 36 H 0.106 0.894 37 H 0.101 0.899 38 H 0.136 0.864 39 H 0.217 0.783 40 H -0.146 1.146 41 H -0.168 1.168 42 H 0.155 0.845 43 H 0.168 0.832 44 H 0.245 0.755 45 H 0.134 0.866 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -6.972 -1.338 -1.669 7.292 hybrid contribution 1.431 -0.515 -1.220 1.950 sum -5.541 -1.852 -2.889 6.518 Atomic orbital electron populations 1.23526 0.75896 1.04344 1.03192 1.86606 1.23689 1.31850 1.82976 1.23593 0.90956 0.82541 0.73601 1.90725 1.65827 1.36097 1.43840 1.20574 0.85278 0.90740 0.95899 1.55272 1.68133 1.35355 1.25229 1.01912 0.73294 0.74165 0.71602 1.93522 1.81680 1.36714 1.81166 1.93664 1.71478 1.50836 1.76151 1.29439 1.27241 0.98535 1.23545 1.24676 0.96702 0.99353 0.95982 1.21003 1.03274 0.87242 1.05720 1.84420 1.08931 0.98649 1.64496 1.24256 0.97717 0.98951 1.10973 1.20537 0.98372 0.92363 1.02531 1.18467 0.92985 0.94198 1.00137 1.25121 1.05049 0.90625 0.96683 1.86651 1.34644 1.69573 1.41815 0.95367 0.90952 0.81169 0.79401 1.24141 0.94672 0.94405 1.04027 1.23168 0.88576 0.90268 0.95241 1.86710 1.26016 1.80552 1.37361 1.20968 0.74727 0.85606 0.80351 1.93258 1.88759 1.57907 1.75000 1.93203 1.63775 1.91499 1.67571 1.93213 1.48060 1.92374 1.81640 1.24011 0.97744 1.01608 0.94310 0.87753 0.91306 0.91302 0.73413 0.90156 0.87117 0.88718 0.89006 0.89438 0.89879 0.86448 0.78313 1.14634 1.16810 0.84499 0.83186 0.75548 0.86586 0.85500 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 10.56 101.05 1.07 1.02 16 2 O -0.34 0.15 8.29 -39.25 -0.33 -0.18 16 3 C 0.45 0.05 5.52 36.01 0.20 0.24 16 4 O -0.48 -0.74 15.21 -18.75 -0.29 -1.02 16 5 C 0.17 -0.15 1.27 -132.16 -0.17 -0.32 16 6 N -1.08 0.63 4.99 0.26 0.00 0.63 16 7 S 2.70 6.51 5.21 -107.50 -0.56 5.95 16 8 O -0.94 -3.08 11.50 -57.17 -0.66 -3.74 16 9 O -0.93 -5.14 15.43 -57.17 -0.88 -6.02 16 10 C -0.69 -1.03 4.06 -41.20 -0.17 -1.19 16 11 C -0.05 -0.03 6.04 -36.00 -0.22 -0.25 16 12 C -0.11 -0.01 8.62 36.00 0.31 0.30 16 13 S 0.17 -0.21 22.12 -107.50 -2.38 -2.59 16 14 C -0.20 0.34 6.02 -36.00 -0.22 0.12 16 15 C -0.08 0.41 8.74 36.01 0.31 0.73 16 16 C -0.05 -0.03 4.13 -106.25 -0.44 -0.46 16 17 C -0.06 -0.08 2.34 36.01 0.08 0.00 16 18 O -0.52 -1.15 12.85 -35.23 -0.45 -1.60 16 19 Si 0.63 -0.56 27.64 -169.99 -4.70 -5.26 16 20 C -0.13 0.04 5.25 -25.92 -0.14 -0.10 16 21 C 0.07 -0.10 1.36 -89.81 -0.12 -0.23 16 22 O -0.50 0.89 12.92 -35.23 -0.46 0.43 16 23 C 0.44 -0.12 2.85 37.16 0.11 -0.01 16 24 F -0.17 -0.26 17.18 2.25 0.04 -0.22 16 25 F -0.18 0.07 16.65 2.25 0.04 0.11 16 26 F -0.17 -0.03 15.75 2.25 0.04 0.01 16 27 C -0.14 0.41 6.64 -25.92 -0.17 0.23 16 28 H 0.10 -0.42 7.57 -51.93 -0.39 -0.81 16 29 H 0.07 -0.13 6.88 -51.93 -0.36 -0.49 16 30 H 0.07 -0.15 8.13 -51.93 -0.42 -0.57 16 31 H 0.43 -1.19 8.83 -34.46 -0.30 -1.49 16 32 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.11 0.04 7.06 -51.93 -0.37 -0.32 16 34 H 0.09 0.01 6.45 -51.93 -0.34 -0.32 16 35 H 0.09 -0.58 7.67 -51.93 -0.40 -0.98 16 36 H 0.09 -0.56 8.14 -51.93 -0.42 -0.98 16 37 H 0.08 -0.50 3.19 -51.93 -0.17 -0.66 16 38 H 0.12 0.31 5.05 -51.93 -0.26 0.05 16 39 H 0.37 -0.83 7.13 45.56 0.32 -0.50 16 40 H -0.22 0.05 6.22 56.52 0.35 0.40 16 41 H -0.24 -0.56 7.11 56.52 0.40 -0.16 16 42 H 0.14 -0.13 7.09 -51.93 -0.37 -0.50 16 43 H 0.15 0.14 5.17 -51.93 -0.27 -0.13 16 44 H 0.39 -2.08 8.42 45.56 0.38 -1.70 16 45 H 0.12 -0.60 8.11 -51.93 -0.42 -1.02 16 46 H 0.13 -0.44 7.09 -51.93 -0.37 -0.80 16 LS Contribution 392.63 15.07 5.92 5.92 Total: 0.00 -10.99 392.63 -8.04 -19.03 By element: Atomic # 1 Polarization: -7.72 SS G_CDS: -3.82 Total: -11.54 kcal Atomic # 6 Polarization: -0.35 SS G_CDS: 0.44 Total: 0.09 kcal Atomic # 7 Polarization: 0.63 SS G_CDS: 0.00 Total: 0.63 kcal Atomic # 8 Polarization: -9.07 SS G_CDS: -3.06 Total: -12.13 kcal Atomic # 9 Polarization: -0.22 SS G_CDS: 0.11 Total: -0.11 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -4.70 Total: -5.26 kcal Atomic # 16 Polarization: 6.30 SS G_CDS: -2.94 Total: 3.36 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -10.99 -8.04 -19.03 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_18364790_15065288.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -271.202 kcal (2) G-P(sol) polarization free energy of solvation -10.993 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -282.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.038 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.032 kcal (6) G-S(sol) free energy of system = (1) + (5) -290.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.97 seconds