Wall clock time and date at job start Mon Mar 8 2021 10:13:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45203 * 109.46958 * 2 1 4 4 C 1.34230 * 116.99761 * 180.02562 * 3 2 1 5 5 O 1.20819 * 120.00268 * 0.02562 * 4 3 2 6 6 C 1.50702 * 119.99762 * 180.02562 * 4 3 2 7 7 H 1.09001 * 112.85258 * 311.19543 * 6 4 3 8 8 C 1.53782 * 113.68945 * 82.46315 * 6 4 3 9 9 C 1.53788 * 87.07986 * 139.99108 * 8 6 4 10 10 F 1.39896 * 113.69223 * 220.00609 * 9 8 6 11 11 C 1.53000 * 113.61191 * 89.11808 * 9 8 6 12 12 S 1.81394 * 109.47461 * 82.50354 * 11 9 8 13 13 O 1.42103 * 110.54130 * 68.37374 * 12 11 9 14 14 O 1.42102 * 110.54019 * 291.62391 * 12 11 9 15 15 O 1.52203 * 104.45044 * 179.97438 * 12 11 9 16 16 C 1.35994 * 113.99777 * 75.00134 * 15 12 11 17 17 C 1.39160 * 120.07007 * 270.27136 * 16 15 12 18 18 O 1.35993 * 120.07340 * 0.02562 * 17 16 15 19 19 C 1.42898 * 116.99990 * 270.23020 * 18 17 16 20 20 C 1.38564 * 119.85207 * 180.23465 * 17 16 15 21 21 C 1.50702 * 120.00064 * 179.79845 * 20 17 16 22 22 O 1.42892 * 109.47242 * 74.71914 * 21 20 17 23 23 Si 1.86298 * 109.46915 * 194.72453 * 21 20 17 24 24 C 1.38242 * 119.99944 * 359.51773 * 20 17 16 25 25 C 1.38259 * 120.14682 * 0.22950 * 24 20 17 26 26 C 1.38240 * 120.14476 * 0.02562 * 25 24 20 27 27 C 1.53777 * 87.08091 * 334.56712 * 9 8 6 28 28 H 1.08999 * 109.47174 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47432 * 299.99429 * 1 2 3 30 30 H 1.09005 * 109.47476 * 59.99499 * 1 2 3 31 31 H 1.09008 * 109.47182 * 240.00684 * 2 1 3 32 32 H 1.08997 * 109.47398 * 120.00132 * 2 1 3 33 33 H 1.08996 * 113.61694 * 25.44812 * 8 6 4 34 34 H 1.08997 * 113.61460 * 254.53925 * 8 6 4 35 35 H 1.09006 * 109.47140 * 322.50042 * 11 9 8 36 36 H 1.09004 * 109.46716 * 202.50627 * 11 9 8 37 37 H 1.08998 * 109.47306 * 180.02562 * 19 18 17 38 38 H 1.09003 * 109.46973 * 299.99945 * 19 18 17 39 39 H 1.08997 * 109.47352 * 60.00084 * 19 18 17 40 40 H 1.09000 * 109.46724 * 314.71960 * 21 20 17 41 41 H 0.96703 * 114.00176 * 180.02562 * 22 21 20 42 42 H 1.48506 * 109.99834 * 178.68053 * 23 21 20 43 43 H 1.48502 * 110.00011 * 299.99318 * 23 21 20 44 44 H 1.08003 * 119.92640 * 180.25394 * 24 20 17 45 45 H 1.07998 * 119.92590 * 180.02562 * 25 24 20 46 46 H 1.07998 * 119.99950 * 180.02562 * 26 25 24 47 47 H 1.08995 * 113.61491 * 139.97906 * 27 9 8 48 48 H 1.08999 * 113.61750 * 270.88352 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9206 2.9375 0.0000 7 1 3.4707 3.5819 -0.7552 8 6 3.9868 3.5782 1.3964 9 6 5.3568 4.1434 0.9859 10 9 6.3114 4.1012 2.0078 11 6 5.2763 5.5108 0.3042 12 16 5.1609 6.8094 1.5654 13 8 6.3793 6.9109 2.2897 14 8 3.9116 6.7405 2.2392 15 8 5.0883 8.1054 0.7706 16 6 3.8821 8.3269 0.1828 17 6 3.6348 7.8522 -1.1017 18 8 4.5985 7.1653 -1.7717 19 6 5.5000 7.9294 -2.5751 20 6 2.4059 8.0847 -1.6982 21 6 2.1360 7.5760 -3.0909 22 8 1.9269 6.1631 -3.0498 23 14 0.6157 8.4094 -3.7726 24 6 1.4254 8.7782 -1.0136 25 6 1.6693 9.2453 0.2646 26 6 2.8950 9.0213 0.8635 27 6 5.4582 2.9682 -0.0006 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5137 0.8900 30 1 -0.3634 0.5139 -0.8900 31 1 1.8933 -0.5138 -0.8901 32 1 1.8933 -0.5138 0.8899 33 1 4.0393 2.8524 2.2079 34 1 3.2298 4.3449 1.5613 35 1 4.3947 5.5464 -0.3358 36 1 6.1701 5.6689 -0.2994 37 1 6.2159 7.2611 -3.0536 38 1 4.9390 8.4674 -3.3392 39 1 6.0325 8.6424 -1.9458 40 1 2.9900 7.7985 -3.7307 41 1 1.7477 5.7667 -3.9134 42 1 0.3570 7.9399 -5.1576 43 1 -0.5558 8.1138 -2.9091 44 1 0.4666 8.9551 -1.4781 45 1 0.9007 9.7863 0.7964 46 1 3.0829 9.3869 1.8622 47 1 5.8889 3.2424 -0.9636 48 1 5.9129 2.0755 0.4288 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_204905_15494190.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:13:49 Heat of formation + Delta-G solvation = -229.632138 kcal Electronic energy + Delta-G solvation = -39694.867361 eV Core-core repulsion = 34340.666796 eV Total energy + Delta-G solvation = -5354.200565 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.116 amu Computer time = 3.25 seconds Orbital eigenvalues (eV) -48.92892 -42.65325 -41.79417 -40.31630 -39.53029 -38.77134 -38.25217 -37.74181 -37.43756 -37.14740 -32.84643 -32.78106 -31.60871 -31.30550 -28.47182 -27.32776 -27.05995 -26.90252 -24.74675 -24.03788 -23.19934 -22.36049 -21.59199 -20.35724 -19.65408 -19.43140 -19.09494 -18.84918 -18.59403 -18.50188 -17.96276 -17.65914 -17.34519 -17.05552 -16.89479 -16.62642 -16.38587 -16.03722 -16.00881 -15.77200 -15.66525 -15.49069 -15.30627 -14.81167 -14.44192 -14.33362 -14.22016 -14.11957 -14.04234 -13.76036 -13.71363 -13.67146 -13.58548 -13.32528 -13.23143 -13.08921 -13.02747 -12.93734 -12.81967 -12.75429 -12.47864 -12.47361 -12.39328 -11.97799 -11.93433 -11.52485 -11.43400 -11.42084 -11.34553 -10.68350 -10.26646 -10.10097 -5.18590 -1.18926 -0.33357 -0.22817 0.88237 1.04334 1.12338 1.37738 1.58803 1.72786 1.91746 2.33231 2.40576 2.64250 2.81615 2.89022 2.96216 2.98921 3.16136 3.32502 3.35251 3.58472 3.61604 3.75812 3.77919 3.86557 3.90170 3.94510 3.94829 3.99404 4.02512 4.08555 4.14749 4.28159 4.28727 4.34184 4.40574 4.49271 4.52764 4.54202 4.57375 4.67266 4.72627 4.74425 4.79891 4.90939 4.99378 5.00669 5.03253 5.25137 5.44624 5.97426 6.23078 6.72439 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.502 6.502 6 C -0.106 4.106 7 H 0.138 0.862 8 C -0.147 4.147 9 C 0.102 3.898 10 F -0.182 7.182 11 C -0.653 4.653 12 S 2.595 3.405 13 O -0.909 6.909 14 O -0.941 6.941 15 O -0.656 6.656 16 C 0.043 3.957 17 C 0.109 3.891 18 O -0.331 6.331 19 C 0.026 3.974 20 C -0.075 4.075 21 C -0.070 4.070 22 O -0.527 6.527 23 Si 0.685 3.315 24 C -0.086 4.086 25 C -0.097 4.097 26 C -0.069 4.069 27 C -0.119 4.119 28 H 0.082 0.918 29 H 0.068 0.932 30 H 0.067 0.933 31 H 0.071 0.929 32 H 0.072 0.928 33 H 0.114 0.886 34 H 0.109 0.891 35 H 0.165 0.835 36 H 0.157 0.843 37 H 0.103 0.897 38 H 0.056 0.944 39 H 0.058 0.942 40 H 0.077 0.923 41 H 0.382 0.618 42 H -0.257 1.257 43 H -0.249 1.249 44 H 0.146 0.854 45 H 0.151 0.849 46 H 0.151 0.849 47 H 0.099 0.901 48 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.152 4.730 -7.272 10.090 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.319 3.681 5 O -0.389 6.389 6 C -0.126 4.126 7 H 0.155 0.845 8 C -0.184 4.184 9 C 0.082 3.918 10 F -0.162 7.162 11 C -0.778 4.778 12 S 2.689 3.311 13 O -0.907 6.907 14 O -0.940 6.940 15 O -0.614 6.614 16 C 0.001 3.999 17 C 0.063 3.937 18 O -0.248 6.248 19 C -0.068 4.068 20 C -0.076 4.076 21 C -0.179 4.179 22 O -0.334 6.334 23 Si 0.586 3.414 24 C -0.104 4.104 25 C -0.115 4.115 26 C -0.089 4.089 27 C -0.157 4.157 28 H 0.100 0.900 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.090 0.910 32 H 0.090 0.910 33 H 0.132 0.868 34 H 0.128 0.872 35 H 0.183 0.817 36 H 0.175 0.825 37 H 0.122 0.878 38 H 0.074 0.926 39 H 0.077 0.923 40 H 0.095 0.905 41 H 0.230 0.770 42 H -0.181 1.181 43 H -0.173 1.173 44 H 0.163 0.837 45 H 0.169 0.831 46 H 0.169 0.831 47 H 0.117 0.883 48 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -5.421 4.640 -6.315 9.529 hybrid contribution 0.626 -1.573 -0.943 1.938 sum -4.795 3.067 -7.258 9.224 Atomic orbital electron populations 1.21822 0.92266 1.03264 1.03720 1.23112 0.95671 0.79730 1.02815 1.86522 1.24056 1.32832 1.83583 1.23176 0.80840 0.91813 0.72309 1.90693 1.60525 1.42720 1.44938 1.22283 0.97223 0.92078 1.00970 0.84455 1.23828 0.96029 1.01991 0.96602 1.21574 0.88696 0.93845 0.87639 1.92994 1.65780 1.97256 1.60174 1.31174 1.15078 1.11880 1.19660 1.05588 0.75197 0.74905 0.75401 1.93685 1.46299 1.83548 1.67147 1.93656 1.44249 1.84582 1.71468 1.85754 1.40881 1.60958 1.73845 1.18472 0.81967 1.05843 0.93591 1.18554 0.89929 0.95631 0.89573 1.86079 1.42560 1.33332 1.62869 1.23228 0.92080 0.97343 0.94146 1.19470 0.93150 0.99074 0.95914 1.24692 1.10077 0.86710 0.96433 1.86598 1.93194 1.18380 1.35256 0.95072 0.76877 0.90297 0.79202 1.21359 0.98701 0.95706 0.94641 1.21162 0.96421 0.99349 0.94552 1.21407 0.91862 0.94998 1.00674 1.23577 0.93572 0.97949 1.00631 0.89976 0.91279 0.91379 0.91044 0.90998 0.86769 0.87209 0.81725 0.82463 0.87847 0.92553 0.92300 0.90498 0.76982 1.18144 1.17325 0.83712 0.83127 0.83145 0.88268 0.86322 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.18 10.29 37.16 0.38 0.57 16 2 C 0.06 0.05 6.19 37.16 0.23 0.28 16 3 O -0.35 -0.81 10.22 -39.26 -0.40 -1.22 16 4 C 0.48 1.29 7.49 36.01 0.27 1.55 16 5 O -0.50 -2.64 15.65 -18.74 -0.29 -2.93 16 6 C -0.11 -0.04 3.91 -90.96 -0.36 -0.40 16 7 H 0.14 -0.19 7.65 -51.93 -0.40 -0.59 16 8 C -0.15 -0.13 7.09 -25.91 -0.18 -0.32 16 9 C 0.10 0.15 1.79 -89.81 -0.16 -0.01 16 10 F -0.18 -0.78 16.31 2.25 0.04 -0.74 16 11 C -0.65 -0.20 4.10 37.16 0.15 -0.04 16 12 S 2.60 8.76 4.89 -107.50 -0.53 8.23 16 13 O -0.91 -6.34 17.53 -67.04 -1.18 -7.52 16 14 O -0.94 -4.15 15.69 -67.03 -1.05 -5.20 16 15 O -0.66 -1.48 9.84 -54.22 -0.53 -2.02 16 16 C 0.04 0.05 4.81 -39.12 -0.19 -0.14 16 17 C 0.11 -0.01 4.85 -39.12 -0.19 -0.20 16 18 O -0.33 0.36 6.73 -34.22 -0.23 0.13 16 19 C 0.03 -0.08 10.91 101.05 1.10 1.02 16 20 C -0.08 0.09 5.30 -104.50 -0.55 -0.46 16 21 C -0.07 0.18 2.36 36.01 0.09 0.27 16 22 O -0.53 0.78 12.86 -35.23 -0.45 0.32 16 23 Si 0.69 -2.38 30.20 -169.99 -5.13 -7.51 16 24 C -0.09 0.19 8.66 -39.57 -0.34 -0.15 16 25 C -0.10 0.22 10.04 -39.57 -0.40 -0.17 16 26 C -0.07 0.01 9.05 -39.46 -0.36 -0.34 16 27 C -0.12 -0.05 6.89 -25.92 -0.18 -0.23 16 28 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 30 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.07 0.04 8.13 -51.92 -0.42 -0.38 16 32 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 33 H 0.11 0.08 8.10 -51.93 -0.42 -0.34 16 34 H 0.11 0.03 7.51 -51.93 -0.39 -0.36 16 35 H 0.16 -0.18 5.18 -51.92 -0.27 -0.45 16 36 H 0.16 -0.29 8.09 -51.92 -0.42 -0.71 16 37 H 0.10 -0.50 8.14 -51.93 -0.42 -0.93 16 38 H 0.06 -0.26 7.10 -51.93 -0.37 -0.63 16 39 H 0.06 -0.17 8.14 -51.93 -0.42 -0.60 16 40 H 0.08 -0.32 6.56 -51.93 -0.34 -0.66 16 41 H 0.38 -1.92 8.74 45.56 0.40 -1.52 16 42 H -0.26 0.30 7.11 56.52 0.40 0.70 16 43 H -0.25 0.24 6.75 56.52 0.38 0.62 16 44 H 0.15 -0.59 4.89 -52.48 -0.26 -0.85 16 45 H 0.15 -0.77 8.06 -52.49 -0.42 -1.19 16 46 H 0.15 -0.19 8.06 -52.49 -0.42 -0.61 16 47 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 48 H 0.12 0.17 7.44 -51.93 -0.39 -0.21 16 LS Contribution 409.94 15.07 6.18 6.18 Total: 0.00 -11.76 409.94 -10.56 -22.32 By element: Atomic # 1 Polarization: -4.96 SS G_CDS: -6.29 Total: -11.26 kcal Atomic # 6 Polarization: 1.91 SS G_CDS: -0.69 Total: 1.22 kcal Atomic # 8 Polarization: -14.30 SS G_CDS: -4.14 Total: -18.44 kcal Atomic # 9 Polarization: -0.78 SS G_CDS: 0.04 Total: -0.74 kcal Atomic # 14 Polarization: -2.38 SS G_CDS: -5.13 Total: -7.51 kcal Atomic # 16 Polarization: 8.76 SS G_CDS: -0.53 Total: 8.23 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -11.76 -10.56 -22.32 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_204905_15494190.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -207.314 kcal (2) G-P(sol) polarization free energy of solvation -11.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -219.071 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.562 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.318 kcal (6) G-S(sol) free energy of system = (1) + (5) -229.632 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.25 seconds