Wall clock time and date at job start Mon Mar 8 2021 11:04:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.45202 * 109.47071 * 2 1 4 4 C 1.34227 * 117.00102 * 179.97438 * 3 2 1 5 5 O 1.20826 * 119.99736 * 0.02562 * 4 3 2 6 6 C 1.50704 * 120.00186 * 179.97438 * 4 3 2 7 7 H 1.09004 * 109.46741 * 300.00661 * 6 4 3 8 8 C 1.53003 * 109.46851 * 60.00215 * 6 4 3 9 9 C 1.53001 * 109.47012 * 180.02562 * 8 6 4 10 10 C 1.53000 * 109.46892 * 300.00029 * 9 8 6 11 11 F 1.39900 * 109.47445 * 300.00087 * 10 9 8 12 12 C 1.53001 * 109.46892 * 180.02562 * 10 9 8 13 13 S 1.81401 * 109.47240 * 60.00212 * 12 10 9 14 14 O 1.42099 * 110.54239 * 68.37256 * 13 12 10 15 15 O 1.42102 * 110.54202 * 291.62388 * 13 12 10 16 16 O 1.52194 * 104.45064 * 179.97438 * 13 12 10 17 17 C 1.35922 * 114.00224 * 74.99543 * 16 13 12 18 18 C 1.38822 * 120.05794 * 90.00058 * 17 16 13 19 19 Cl 1.73602 * 120.03534 * 359.97438 * 18 17 16 20 20 C 1.38248 * 119.92380 * 180.02562 * 18 17 16 21 21 C 1.38250 * 120.04553 * 359.97438 * 20 18 17 22 22 C 1.50701 * 119.94201 * 180.02562 * 21 20 18 23 23 O 1.42901 * 109.46989 * 244.97989 * 22 21 20 24 24 Si 1.86301 * 109.46938 * 4.97719 * 22 21 20 25 25 C 1.38281 * 120.11543 * 359.97438 * 21 20 18 26 26 C 1.38149 * 120.07817 * 0.25948 * 25 21 20 27 27 C 1.53003 * 109.47315 * 60.00156 * 10 9 8 28 28 C 1.52993 * 109.47371 * 180.02562 * 6 4 3 29 29 H 1.09001 * 109.46742 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.46677 * 299.99693 * 1 2 3 31 31 H 1.09002 * 109.47260 * 59.99881 * 1 2 3 32 32 H 1.08997 * 109.46677 * 240.00307 * 2 1 3 33 33 H 1.09002 * 109.47260 * 120.00119 * 2 1 3 34 34 H 1.08996 * 109.47066 * 299.99916 * 8 6 4 35 35 H 1.08996 * 109.47240 * 60.00021 * 8 6 4 36 36 H 1.08998 * 109.46844 * 180.02562 * 9 8 6 37 37 H 1.08996 * 109.47252 * 59.99843 * 9 8 6 38 38 H 1.08996 * 109.47252 * 299.99814 * 12 10 9 39 39 H 1.09000 * 109.46990 * 180.02562 * 12 10 9 40 40 H 1.08004 * 119.97747 * 179.97438 * 20 18 17 41 41 H 1.08995 * 109.46951 * 124.98073 * 22 21 20 42 42 H 0.96696 * 114.00083 * 60.00068 * 23 22 21 43 43 H 1.48509 * 109.99542 * 180.02562 * 24 22 21 44 44 H 1.48493 * 110.00136 * 301.31693 * 24 22 21 45 45 H 1.08002 * 119.95700 * 179.97438 * 25 21 20 46 46 H 1.07997 * 120.02220 * 179.72850 * 26 25 21 47 47 H 1.09004 * 109.46906 * 59.99823 * 27 10 9 48 48 H 1.08996 * 109.47066 * 180.02562 * 27 10 9 49 49 H 1.09001 * 109.46921 * 59.99960 * 28 6 4 50 50 H 1.09004 * 109.47076 * 300.00290 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9208 2.9375 0.0000 7 1 3.5851 3.4691 -0.8905 8 6 3.4486 3.6851 1.2486 9 6 4.0329 5.0992 1.2478 10 6 5.5608 5.0196 1.2482 11 9 5.9920 4.3375 2.3910 12 6 6.1451 6.4337 1.2480 13 16 5.5853 7.3194 2.7288 14 8 6.1692 6.7579 3.8962 15 8 4.1894 7.5758 2.6586 16 8 6.2264 8.6950 2.6136 17 6 5.6371 9.5044 1.6943 18 6 4.5910 10.3363 2.0694 19 17 4.0332 10.3437 3.7134 20 6 3.9932 11.1580 1.1320 21 6 4.4370 11.1518 -0.1773 22 6 3.7841 12.0489 -1.1971 23 8 3.1323 11.2500 -2.1865 24 14 2.5299 13.1381 -0.3536 25 6 5.4796 10.3246 -0.5526 26 6 6.0773 9.4979 0.3790 27 6 6.0329 4.2720 -0.0004 28 6 5.4486 2.8575 0.0001 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3632 0.5138 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 1.8933 -0.5138 -0.8900 33 1 1.8934 -0.5139 0.8900 34 1 2.3601 3.7422 1.2481 35 1 3.7841 3.1535 2.1390 36 1 3.6969 5.6316 2.1375 37 1 3.6970 5.6306 0.3574 38 1 5.8092 6.9655 0.3578 39 1 7.2336 6.3770 1.2478 40 1 3.1790 11.8053 1.4228 41 1 4.5427 12.6699 -1.6734 42 1 2.4433 10.6710 -1.8332 43 1 1.8784 14.0273 -1.3487 44 1 1.5076 12.3029 0.3266 45 1 5.8239 10.3215 -1.5762 46 1 6.8886 8.8490 0.0839 47 1 5.6970 4.8034 -0.8909 48 1 7.1214 4.2149 0.0001 49 1 5.7846 2.3250 -0.8896 50 1 5.7845 2.3257 0.8904 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_2163008_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:04:48 Heat of formation + Delta-G solvation = -242.960558 kcal Electronic energy + Delta-G solvation = -40569.186891 eV Core-core repulsion = 35017.753143 eV Total energy + Delta-G solvation = -5551.433748 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.093 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -49.10709 -42.42955 -41.79616 -40.02633 -39.12083 -38.50221 -37.97459 -37.68662 -37.43997 -37.27946 -34.25187 -32.68698 -32.49306 -32.07989 -31.99227 -29.09807 -27.08410 -25.19306 -24.43331 -24.22228 -23.71370 -23.38706 -22.00355 -21.69542 -20.86785 -19.73468 -19.18819 -18.90962 -18.78869 -18.44160 -17.83746 -17.71934 -17.38448 -17.11638 -16.87699 -16.76322 -16.45134 -16.25460 -16.08073 -15.78901 -15.42956 -15.31714 -15.00416 -14.92324 -14.70047 -14.57288 -14.50852 -14.44870 -14.11383 -13.92235 -13.74540 -13.69720 -13.61311 -13.46018 -13.38051 -13.19753 -13.18238 -13.12906 -12.93475 -12.81135 -12.67836 -12.61276 -12.52485 -12.45044 -12.18053 -12.07426 -11.95529 -11.83301 -11.74116 -11.57979 -11.36203 -11.11805 -10.69357 -10.31729 -9.97150 -4.92745 -1.33590 -0.31868 -0.15650 0.69691 0.93532 1.05581 1.26544 1.58468 1.59004 1.95822 2.09349 2.32398 2.67711 2.81145 3.10510 3.24832 3.28969 3.34671 3.37797 3.47079 3.52827 3.61257 3.70131 3.78653 3.92449 3.93931 3.95718 4.00920 4.02640 4.05064 4.14500 4.26831 4.28867 4.29390 4.33565 4.49489 4.54860 4.62184 4.63893 4.71748 4.78019 4.79409 4.86559 4.88793 4.93075 4.94095 5.00665 5.08670 5.10539 5.11413 5.24621 5.41398 5.42668 6.49683 6.61980 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.463 3.537 5 O -0.541 6.541 6 C -0.076 4.076 7 H 0.150 0.850 8 C -0.111 4.111 9 C -0.173 4.173 10 C 0.121 3.879 11 F -0.217 7.217 12 C -0.664 4.664 13 S 2.575 3.425 14 O -0.964 6.964 15 O -0.951 6.951 16 O -0.663 6.663 17 C 0.052 3.948 18 C -0.030 4.030 19 Cl -0.059 7.059 20 C -0.100 4.100 21 C -0.079 4.079 22 C -0.063 4.063 23 O -0.535 6.535 24 Si 0.728 3.272 25 C -0.056 4.056 26 C -0.108 4.108 27 C -0.121 4.121 28 C -0.111 4.111 29 H 0.095 0.905 30 H 0.067 0.933 31 H 0.072 0.928 32 H 0.070 0.930 33 H 0.063 0.937 34 H 0.099 0.901 35 H 0.055 0.945 36 H 0.081 0.919 37 H 0.138 0.862 38 H 0.201 0.799 39 H 0.182 0.818 40 H 0.156 0.844 41 H 0.151 0.849 42 H 0.390 0.610 43 H -0.297 1.297 44 H -0.284 1.284 45 H 0.184 0.816 46 H 0.193 0.807 47 H 0.131 0.869 48 H 0.099 0.901 49 H 0.088 0.912 50 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.013 5.163 -10.050 11.299 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.430 6.430 6 C -0.094 4.094 7 H 0.167 0.833 8 C -0.149 4.149 9 C -0.210 4.210 10 C 0.102 3.898 11 F -0.197 7.197 12 C -0.793 4.793 13 S 2.674 3.326 14 O -0.962 6.962 15 O -0.949 6.949 16 O -0.622 6.622 17 C 0.009 3.991 18 C -0.059 4.059 19 Cl -0.030 7.030 20 C -0.118 4.118 21 C -0.081 4.081 22 C -0.174 4.174 23 O -0.344 6.344 24 Si 0.635 3.365 25 C -0.074 4.074 26 C -0.127 4.127 27 C -0.159 4.159 28 C -0.149 4.149 29 H 0.113 0.887 30 H 0.086 0.914 31 H 0.091 0.909 32 H 0.088 0.912 33 H 0.081 0.919 34 H 0.117 0.883 35 H 0.074 0.926 36 H 0.100 0.900 37 H 0.156 0.844 38 H 0.219 0.781 39 H 0.199 0.801 40 H 0.173 0.827 41 H 0.168 0.832 42 H 0.240 0.760 43 H -0.225 1.225 44 H -0.211 1.211 45 H 0.201 0.799 46 H 0.210 0.790 47 H 0.150 0.850 48 H 0.118 0.882 49 H 0.107 0.893 50 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -0.452 5.563 -9.381 10.916 hybrid contribution -0.271 -1.861 0.522 1.951 sum -0.723 3.703 -8.859 9.629 Atomic orbital electron populations 1.21823 0.90626 1.04241 1.03793 1.23242 0.96959 0.79446 1.02366 1.86510 1.24227 1.33352 1.83457 1.24309 0.80590 0.93337 0.71047 1.90675 1.61165 1.44497 1.46691 1.21294 0.96483 0.88469 1.03204 0.83261 1.21468 1.02801 0.94500 0.96107 1.22759 0.91759 0.98875 1.07639 1.20915 0.95342 0.88167 0.85392 1.92948 1.91422 1.81900 1.53455 1.31444 1.16290 1.07950 1.23625 1.05992 0.74516 0.74300 0.77755 1.93628 1.78864 1.76987 1.46710 1.93656 1.32467 1.81352 1.87417 1.85779 1.69887 1.43319 1.63168 1.18249 0.95829 0.96964 0.88036 1.21257 0.96792 0.99925 0.87921 1.98431 1.88584 1.97487 1.18483 1.21112 1.00428 0.98174 0.92118 1.20583 0.96706 0.97812 0.93003 1.24951 1.03060 0.96556 0.92801 1.86623 1.55005 1.58058 1.34672 0.94308 0.80141 0.80658 0.81378 1.21422 0.92739 0.91906 1.01326 1.21869 1.01001 1.01632 0.88223 1.22171 1.03153 0.94354 0.96221 1.21488 0.91796 0.97756 1.03869 0.88658 0.91405 0.90944 0.91197 0.91886 0.88255 0.92636 0.90032 0.84378 0.78140 0.80053 0.82714 0.83160 0.76027 1.22462 1.21096 0.79903 0.79038 0.85034 0.88216 0.89318 0.92792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.46 10.29 71.98 0.74 1.20 16 2 C 0.05 0.09 6.19 71.98 0.45 0.53 16 3 O -0.36 -1.27 10.12 -51.38 -0.52 -1.79 16 4 C 0.46 2.14 7.26 71.24 0.52 2.66 16 5 O -0.54 -6.21 15.73 21.96 0.35 -5.87 16 6 C -0.08 0.21 2.63 -11.54 -0.03 0.18 16 7 H 0.15 -1.47 8.14 -2.38 -0.02 -1.49 16 8 C -0.11 0.16 5.01 30.60 0.15 0.31 16 9 C -0.17 0.64 4.52 30.59 0.14 0.77 16 10 C 0.12 -0.39 0.88 -10.79 -0.01 -0.40 16 11 F -0.22 -1.38 15.04 44.97 0.68 -0.71 16 12 C -0.66 5.20 4.74 71.98 0.34 5.55 16 13 S 2.57 11.06 4.49 -56.49 -0.25 10.81 16 14 O -0.96 -14.39 17.60 -118.57 -2.09 -16.47 16 15 O -0.95 -5.95 12.80 -118.57 -1.52 -7.47 16 16 O -0.66 -1.96 9.51 -61.76 -0.59 -2.55 16 17 C 0.05 -0.07 4.80 22.52 0.11 0.03 16 18 C -0.03 -0.04 5.66 22.41 0.13 0.09 16 19 Cl -0.06 -0.41 27.26 -2.72 -0.07 -0.48 16 20 C -0.10 0.43 8.45 22.27 0.19 0.62 16 21 C -0.08 0.72 5.35 -19.85 -0.11 0.62 16 22 C -0.06 0.62 2.80 71.24 0.20 0.82 16 23 O -0.54 4.05 12.83 -148.98 -1.91 2.14 16 24 Si 0.73 -4.64 29.88 68.60 2.05 -2.59 16 25 C -0.06 0.70 9.68 22.26 0.22 0.92 16 26 C -0.11 1.16 8.46 22.36 0.19 1.35 16 27 C -0.12 1.03 5.00 30.61 0.15 1.18 16 28 C -0.11 0.26 4.38 30.61 0.13 0.40 16 29 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 30 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 31 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 32 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 33 H 0.06 0.19 8.13 -2.39 -0.02 0.17 16 34 H 0.10 -0.30 8.11 -2.39 -0.02 -0.32 16 35 H 0.05 0.19 7.80 -2.39 -0.02 0.17 16 36 H 0.08 0.05 5.46 -2.39 -0.01 0.04 16 37 H 0.14 -1.58 8.14 -2.39 -0.02 -1.60 16 38 H 0.20 -3.57 6.59 -2.39 -0.02 -3.58 16 39 H 0.18 -2.30 8.14 -2.39 -0.02 -2.32 16 40 H 0.16 -0.91 4.83 -2.91 -0.01 -0.92 16 41 H 0.15 -2.02 7.96 -2.39 -0.02 -2.04 16 42 H 0.39 -4.79 8.70 -74.06 -0.64 -5.44 16 43 H -0.30 -0.51 7.11 99.48 0.71 0.19 16 44 H -0.28 0.36 7.01 99.48 0.70 1.06 16 45 H 0.18 -3.32 8.06 -2.91 -0.02 -3.34 16 46 H 0.19 -3.64 7.47 -2.91 -0.02 -3.66 16 47 H 0.13 -2.14 8.14 -2.38 -0.02 -2.16 16 48 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 49 H 0.09 -0.26 8.10 -2.39 -0.02 -0.28 16 50 H 0.05 0.21 7.76 -2.38 -0.02 0.19 16 Total: 0.00 -35.45 427.72 0.01 -35.45 By element: Atomic # 1 Polarization: -27.68 SS G_CDS: 0.38 Total: -27.30 kcal Atomic # 6 Polarization: 13.32 SS G_CDS: 3.50 Total: 16.83 kcal Atomic # 8 Polarization: -25.73 SS G_CDS: -6.28 Total: -32.01 kcal Atomic # 9 Polarization: -1.38 SS G_CDS: 0.68 Total: -0.71 kcal Atomic # 14 Polarization: -4.64 SS G_CDS: 2.05 Total: -2.59 kcal Atomic # 16 Polarization: 11.06 SS G_CDS: -0.25 Total: 10.81 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -0.07 Total: -0.48 kcal Total: -35.45 0.01 -35.45 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_2163008_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -207.512 kcal (2) G-P(sol) polarization free energy of solvation -35.454 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -242.966 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.006 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.448 kcal (6) G-S(sol) free energy of system = (1) + (5) -242.961 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds