Wall clock time and date at job start Mon Mar 8 2021 11:58:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45198 * 109.47297 * 2 1 4 4 C 1.34226 * 117.00289 * 179.97438 * 3 2 1 5 5 O 1.20834 * 119.99935 * 0.02562 * 4 3 2 6 6 C 1.50698 * 120.00465 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.90282 * 311.25126 * 6 4 3 8 8 C 1.53780 * 113.61652 * 82.50176 * 6 4 3 9 9 C 1.53779 * 87.08276 * 139.98635 * 8 6 4 10 10 F 1.39900 * 113.68786 * 220.01377 * 9 8 6 11 11 C 1.52994 * 113.61669 * 89.11494 * 9 8 6 12 12 S 1.81405 * 109.46902 * 82.50469 * 11 9 8 13 13 O 1.42097 * 110.54271 * 68.37807 * 12 11 9 14 14 O 1.42096 * 110.54146 * 291.61980 * 12 11 9 15 15 O 1.52201 * 104.44679 * 179.97438 * 12 11 9 16 16 C 1.35706 * 113.99866 * 73.90063 * 15 12 11 17 17 C 1.38993 * 119.90164 * 262.06500 * 16 15 12 18 18 C 1.50696 * 119.95783 * 359.97438 * 17 16 15 19 19 O 1.42895 * 109.47626 * 254.47211 * 18 17 16 20 20 Si 1.86305 * 109.47111 * 134.47028 * 18 17 16 21 21 C 1.37705 * 120.08993 * 180.27217 * 17 16 15 22 22 C 1.39774 * 119.90602 * 359.47769 * 21 17 16 23 23 C 1.47472 * 120.09208 * 180.24345 * 22 21 17 24 24 O 1.21505 * 119.99863 * 0.30089 * 23 22 21 25 25 O 1.34744 * 119.99593 * 180.29355 * 23 22 21 26 26 C 1.45201 * 116.99700 * 180.02562 * 25 23 22 27 27 C 1.39819 * 119.81401 * 0.54359 * 22 21 17 28 28 C 1.37661 * 119.90110 * 359.70709 * 27 22 21 29 29 C 1.53777 * 113.61843 * 179.97438 * 6 4 3 30 30 H 1.08999 * 109.47293 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47298 * 300.00602 * 1 2 3 32 32 H 1.09006 * 109.46842 * 60.00605 * 1 2 3 33 33 H 1.08994 * 109.47731 * 239.99438 * 2 1 3 34 34 H 1.09006 * 109.46842 * 119.99395 * 2 1 3 35 35 H 1.08999 * 113.61202 * 25.43175 * 8 6 4 36 36 H 1.09000 * 113.61350 * 254.53233 * 8 6 4 37 37 H 1.08995 * 109.47367 * 322.50789 * 11 9 8 38 38 H 1.09001 * 109.47318 * 202.50114 * 11 9 8 39 39 H 1.09005 * 109.47196 * 14.47489 * 18 17 16 40 40 H 0.96704 * 113.99809 * 65.75546 * 19 18 17 41 41 H 1.48498 * 109.99797 * 178.68545 * 20 18 17 42 42 H 1.48499 * 109.99861 * 300.00293 * 20 18 17 43 43 H 1.08005 * 120.04440 * 179.72304 * 21 17 16 44 44 H 1.08998 * 109.47194 * 60.00188 * 26 25 23 45 45 H 1.09004 * 109.47017 * 180.02562 * 26 25 23 46 46 H 1.08999 * 109.47088 * 299.99988 * 26 25 23 47 47 H 1.07995 * 120.04561 * 179.72872 * 27 22 21 48 48 H 1.08005 * 119.94473 * 180.02562 * 28 27 22 49 49 H 1.09011 * 113.61245 * 105.46694 * 29 6 4 50 50 H 1.08999 * 113.61577 * 334.57057 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.4715 3.5820 -0.7555 8 6 3.9857 3.5777 1.3966 9 6 5.3560 4.1431 0.9875 10 9 6.3097 4.1004 2.0102 11 6 5.2763 5.5105 0.3060 12 16 5.1597 6.8089 1.5676 13 8 6.3774 6.9101 2.2929 14 8 3.9098 6.7398 2.2400 15 8 5.0879 8.1050 0.7730 16 6 3.8925 8.3148 0.1659 17 6 3.7310 7.9923 -1.1764 18 6 4.8832 7.4112 -1.9547 19 8 5.4186 8.4073 -2.8283 20 14 4.2854 5.9606 -2.9593 21 6 2.5213 8.2087 -1.7978 22 6 1.4518 8.7433 -1.0738 23 6 0.1530 8.9718 -1.7338 24 8 0.0098 8.6902 -2.9070 25 8 -0.8750 9.4928 -1.0356 26 6 -2.1240 9.6898 -1.7494 27 6 1.6188 9.0668 0.2762 28 6 2.8330 8.8520 0.8882 29 6 5.4582 2.9680 0.0013 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8901 33 1 1.8934 -0.5139 -0.8898 34 1 1.8933 -0.5138 0.8901 35 1 4.0374 2.8516 2.2079 36 1 3.2286 4.3444 1.5610 37 1 4.3952 5.5464 -0.3347 38 1 6.1706 5.6689 -0.2967 39 1 5.6582 7.0797 -1.2634 40 1 5.8288 9.1533 -2.3696 41 1 5.4055 5.3983 -3.7557 42 1 3.7263 4.9176 -2.0622 43 1 2.3980 7.9621 -2.8420 44 1 -2.4818 8.7319 -2.1267 45 1 -2.8659 10.1144 -1.0731 46 1 -1.9617 10.3714 -2.5843 47 1 0.7963 9.4841 0.8379 48 1 2.9626 9.1011 1.9311 49 1 5.8903 3.2423 -0.9612 50 1 5.9124 2.0753 0.4313 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_2787268_15494190.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:58:59 Heat of formation + Delta-G solvation = -274.644320 kcal Electronic energy + Delta-G solvation = -43241.844430 eV Core-core repulsion = 37438.783657 eV Total energy + Delta-G solvation = -5803.060773 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.116 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -49.16559 -42.92871 -41.95891 -41.58061 -39.81309 -39.59094 -38.61784 -37.97526 -37.57461 -37.54803 -37.46229 -33.53800 -32.86775 -32.39078 -31.89300 -28.95241 -27.75100 -27.54148 -26.96669 -25.89325 -24.17486 -23.72246 -22.95972 -22.44937 -21.69013 -20.65515 -20.10536 -19.58689 -19.46198 -19.04330 -18.71019 -18.43348 -18.21984 -17.95090 -17.72656 -17.51918 -17.21129 -17.11474 -16.85205 -16.64863 -16.35437 -16.05666 -15.99785 -15.62970 -15.38065 -15.23970 -15.03061 -14.75599 -14.72784 -14.57970 -14.43366 -14.34198 -14.31090 -14.05354 -13.88012 -13.84383 -13.58953 -13.52831 -13.33445 -13.28496 -13.24040 -13.10488 -12.94570 -12.91635 -12.79478 -12.59948 -12.29253 -12.20514 -11.93216 -11.88080 -11.79235 -11.69874 -11.61468 -11.54050 -11.49794 -10.55216 -10.49492 -5.24250 -1.64499 -0.84251 -0.36341 0.56933 0.88125 0.96901 1.04136 1.17355 1.39876 1.44721 1.61819 2.03316 2.09113 2.29300 2.44289 2.54363 2.71862 2.87573 2.91856 3.02118 3.15243 3.26968 3.30154 3.40645 3.47901 3.48426 3.60520 3.64731 3.72578 3.85658 3.88224 3.91744 3.94172 4.05179 4.15562 4.18043 4.20072 4.21887 4.25098 4.32325 4.40078 4.44442 4.49252 4.55461 4.64296 4.64693 4.70491 4.73721 4.79314 4.95094 5.11785 5.15216 5.33577 6.17718 6.47629 6.59063 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.498 6.498 6 C -0.116 4.116 7 H 0.137 0.863 8 C -0.145 4.145 9 C 0.105 3.895 10 F -0.176 7.176 11 C -0.688 4.688 12 S 2.596 3.404 13 O -0.894 6.894 14 O -0.929 6.929 15 O -0.657 6.657 16 C 0.098 3.902 17 C -0.137 4.137 18 C -0.091 4.091 19 O -0.522 6.522 20 Si 0.730 3.270 21 C -0.023 4.023 22 C -0.102 4.102 23 C 0.508 3.492 24 O -0.490 6.490 25 O -0.352 6.352 26 C 0.036 3.964 27 C -0.038 4.038 28 C -0.097 4.097 29 C -0.122 4.122 30 H 0.082 0.918 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.119 0.881 36 H 0.112 0.888 37 H 0.152 0.848 38 H 0.162 0.838 39 H 0.070 0.930 40 H 0.375 0.625 41 H -0.235 1.235 42 H -0.232 1.232 43 H 0.165 0.835 44 H 0.068 0.932 45 H 0.107 0.893 46 H 0.067 0.933 47 H 0.162 0.838 48 H 0.158 0.842 49 H 0.097 0.903 50 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.704 1.742 -2.607 7.401 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.385 6.385 6 C -0.135 4.135 7 H 0.154 0.846 8 C -0.182 4.182 9 C 0.086 3.914 10 F -0.156 7.156 11 C -0.811 4.811 12 S 2.688 3.312 13 O -0.892 6.892 14 O -0.928 6.928 15 O -0.615 6.615 16 C 0.056 3.944 17 C -0.140 4.140 18 C -0.199 4.199 19 O -0.327 6.327 20 Si 0.626 3.374 21 C -0.041 4.041 22 C -0.104 4.104 23 C 0.352 3.648 24 O -0.378 6.378 25 O -0.268 6.268 26 C -0.057 4.057 27 C -0.056 4.056 28 C -0.117 4.117 29 C -0.160 4.160 30 H 0.101 0.899 31 H 0.087 0.913 32 H 0.087 0.913 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.138 0.862 36 H 0.130 0.870 37 H 0.170 0.830 38 H 0.180 0.820 39 H 0.087 0.913 40 H 0.223 0.777 41 H -0.158 1.158 42 H -0.157 1.157 43 H 0.183 0.817 44 H 0.087 0.913 45 H 0.125 0.875 46 H 0.086 0.914 47 H 0.179 0.821 48 H 0.176 0.824 49 H 0.115 0.885 50 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -6.519 0.519 -2.934 7.167 hybrid contribution 1.198 0.319 0.715 1.431 sum -5.321 0.838 -2.219 5.826 Atomic orbital electron populations 1.21830 0.92116 1.03386 1.03769 1.23144 0.95768 0.79488 1.02922 1.86504 1.23837 1.33105 1.83540 1.23037 0.80994 0.91583 0.72540 1.90709 1.60522 1.42574 1.44730 1.22444 0.97323 0.92649 1.01109 0.84565 1.23842 0.95585 1.02122 0.96689 1.21449 0.89267 0.92859 0.87846 1.93018 1.65664 1.97155 1.59799 1.31674 1.13952 1.14477 1.20972 1.05692 0.75614 0.74529 0.75346 1.93718 1.46103 1.83132 1.66263 1.93684 1.44022 1.84333 1.70718 1.85758 1.41881 1.60552 1.73332 1.18292 0.80947 1.03523 0.91596 1.20428 0.97464 1.03616 0.92468 1.25881 0.94169 1.01232 0.98569 1.86776 1.77832 1.34435 1.33670 0.92576 0.87842 0.72594 0.84369 1.21017 0.89026 0.93285 1.00814 1.19330 0.91925 1.04474 0.94676 1.20843 0.84456 0.74610 0.84896 1.90906 1.83345 1.47202 1.16383 1.86530 1.21712 1.74702 1.43898 1.23402 0.81614 1.02652 0.98047 1.21544 0.97196 0.93923 0.92942 1.21487 0.91373 0.97018 1.01776 1.23623 0.93678 0.98216 1.00487 0.89882 0.91253 0.91284 0.90936 0.90925 0.86243 0.86989 0.82990 0.81988 0.91266 0.77684 1.15782 1.15685 0.81739 0.91338 0.87481 0.91384 0.82078 0.82400 0.88476 0.85673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.33 10.29 37.16 0.38 0.71 16 2 C 0.06 -0.01 6.19 37.16 0.23 0.22 16 3 O -0.35 -0.39 10.22 -39.25 -0.40 -0.79 16 4 C 0.48 0.75 7.48 36.00 0.27 1.02 16 5 O -0.50 -2.11 15.65 -18.76 -0.29 -2.40 16 6 C -0.12 0.10 3.91 -90.96 -0.36 -0.26 16 7 H 0.14 -0.38 5.75 -51.93 -0.30 -0.68 16 8 C -0.14 0.13 7.09 -25.92 -0.18 -0.06 16 9 C 0.11 -0.01 1.79 -89.83 -0.16 -0.17 16 10 F -0.18 -0.45 16.31 2.25 0.04 -0.41 16 11 C -0.69 0.98 3.20 37.15 0.12 1.10 16 12 S 2.60 3.32 4.88 -107.50 -0.52 2.80 16 13 O -0.89 -4.49 17.53 -67.04 -1.18 -5.67 16 14 O -0.93 -1.76 15.21 -67.03 -1.02 -2.78 16 15 O -0.66 -0.13 9.04 -51.15 -0.46 -0.59 16 16 C 0.10 -0.07 4.90 -39.01 -0.19 -0.26 16 17 C -0.14 0.24 4.18 -104.54 -0.44 -0.20 16 18 C -0.09 0.19 2.09 36.00 0.08 0.27 16 19 O -0.52 0.82 12.63 -35.23 -0.45 0.37 16 20 Si 0.73 -2.01 29.07 -169.99 -4.94 -6.95 16 21 C -0.02 0.05 8.22 -39.20 -0.32 -0.28 16 22 C -0.10 0.15 5.87 -104.97 -0.62 -0.46 16 23 C 0.51 -0.06 7.89 34.49 0.27 0.21 16 24 O -0.49 -1.03 16.13 -19.27 -0.31 -1.34 16 25 O -0.35 0.38 9.81 -40.61 -0.40 -0.02 16 26 C 0.04 -0.11 10.57 101.05 1.07 0.96 16 27 C -0.04 0.09 9.61 -39.20 -0.38 -0.28 16 28 C -0.10 0.14 8.56 -39.50 -0.34 -0.20 16 29 C -0.12 0.09 6.88 -25.94 -0.18 -0.09 16 30 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 31 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 34 H 0.07 -0.01 8.13 -51.93 -0.42 -0.44 16 35 H 0.12 -0.13 8.09 -51.93 -0.42 -0.55 16 36 H 0.11 -0.23 7.51 -51.93 -0.39 -0.62 16 37 H 0.15 -0.52 3.39 -51.93 -0.18 -0.69 16 38 H 0.16 -0.64 6.84 -51.92 -0.36 -1.00 16 39 H 0.07 -0.22 4.03 -51.93 -0.21 -0.43 16 40 H 0.37 -1.50 9.12 45.56 0.42 -1.08 16 41 H -0.23 0.09 7.11 56.52 0.40 0.49 16 42 H -0.23 0.88 4.44 56.52 0.25 1.13 16 43 H 0.17 -0.52 6.26 -52.48 -0.33 -0.85 16 44 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 45 H 0.11 -0.55 8.14 -51.93 -0.42 -0.97 16 46 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.16 -0.71 7.60 -52.49 -0.40 -1.11 16 48 H 0.16 -0.39 7.90 -52.48 -0.41 -0.80 16 49 H 0.10 -0.24 8.10 -51.92 -0.42 -0.66 16 50 H 0.13 0.02 7.44 -51.93 -0.39 -0.37 16 LS Contribution 423.87 15.07 6.39 6.39 Total: 0.00 -10.90 423.87 -10.40 -21.30 By element: Atomic # 1 Polarization: -6.02 SS G_CDS: -6.11 Total: -12.13 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: -0.74 Total: 2.23 kcal Atomic # 8 Polarization: -8.72 SS G_CDS: -4.51 Total: -13.22 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -2.01 SS G_CDS: -4.94 Total: -6.95 kcal Atomic # 16 Polarization: 3.32 SS G_CDS: -0.52 Total: 2.80 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -10.90 -10.40 -21.30 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_2787268_15494190.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -253.341 kcal (2) G-P(sol) polarization free energy of solvation -10.899 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -264.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.303 kcal (6) G-S(sol) free energy of system = (1) + (5) -274.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds