Wall clock time and date at job start Mon Mar 8 2021 11:58:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45198 * 109.47297 * 2 1 4 4 C 1.34226 * 117.00289 * 179.97438 * 3 2 1 5 5 O 1.20834 * 119.99935 * 0.02562 * 4 3 2 6 6 C 1.50698 * 120.00465 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.90282 * 311.25126 * 6 4 3 8 8 C 1.53780 * 113.61652 * 82.50176 * 6 4 3 9 9 C 1.53779 * 87.08276 * 139.98635 * 8 6 4 10 10 F 1.39900 * 113.68786 * 220.01377 * 9 8 6 11 11 C 1.52994 * 113.61669 * 89.11494 * 9 8 6 12 12 S 1.81405 * 109.46902 * 82.50469 * 11 9 8 13 13 O 1.42097 * 110.54271 * 68.37807 * 12 11 9 14 14 O 1.42096 * 110.54146 * 291.61980 * 12 11 9 15 15 O 1.52201 * 104.44679 * 179.97438 * 12 11 9 16 16 C 1.35706 * 113.99866 * 73.90063 * 15 12 11 17 17 C 1.38993 * 119.90164 * 262.06500 * 16 15 12 18 18 C 1.50696 * 119.95783 * 359.97438 * 17 16 15 19 19 O 1.42895 * 109.47626 * 254.47211 * 18 17 16 20 20 Si 1.86305 * 109.47111 * 134.47028 * 18 17 16 21 21 C 1.37705 * 120.08993 * 180.27217 * 17 16 15 22 22 C 1.39774 * 119.90602 * 359.47769 * 21 17 16 23 23 C 1.47472 * 120.09208 * 180.24345 * 22 21 17 24 24 O 1.21505 * 119.99863 * 0.30089 * 23 22 21 25 25 O 1.34744 * 119.99593 * 180.29355 * 23 22 21 26 26 C 1.45201 * 116.99700 * 180.02562 * 25 23 22 27 27 C 1.39819 * 119.81401 * 0.54359 * 22 21 17 28 28 C 1.37661 * 119.90110 * 359.70709 * 27 22 21 29 29 C 1.53777 * 113.61843 * 179.97438 * 6 4 3 30 30 H 1.08999 * 109.47293 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47298 * 300.00602 * 1 2 3 32 32 H 1.09006 * 109.46842 * 60.00605 * 1 2 3 33 33 H 1.08994 * 109.47731 * 239.99438 * 2 1 3 34 34 H 1.09006 * 109.46842 * 119.99395 * 2 1 3 35 35 H 1.08999 * 113.61202 * 25.43175 * 8 6 4 36 36 H 1.09000 * 113.61350 * 254.53233 * 8 6 4 37 37 H 1.08995 * 109.47367 * 322.50789 * 11 9 8 38 38 H 1.09001 * 109.47318 * 202.50114 * 11 9 8 39 39 H 1.09005 * 109.47196 * 14.47489 * 18 17 16 40 40 H 0.96704 * 113.99809 * 65.75546 * 19 18 17 41 41 H 1.48498 * 109.99797 * 178.68545 * 20 18 17 42 42 H 1.48499 * 109.99861 * 300.00293 * 20 18 17 43 43 H 1.08005 * 120.04440 * 179.72304 * 21 17 16 44 44 H 1.08998 * 109.47194 * 60.00188 * 26 25 23 45 45 H 1.09004 * 109.47017 * 180.02562 * 26 25 23 46 46 H 1.08999 * 109.47088 * 299.99988 * 26 25 23 47 47 H 1.07995 * 120.04561 * 179.72872 * 27 22 21 48 48 H 1.08005 * 119.94473 * 180.02562 * 28 27 22 49 49 H 1.09011 * 113.61245 * 105.46694 * 29 6 4 50 50 H 1.08999 * 113.61577 * 334.57057 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.4715 3.5820 -0.7555 8 6 3.9857 3.5777 1.3966 9 6 5.3560 4.1431 0.9875 10 9 6.3097 4.1004 2.0102 11 6 5.2763 5.5105 0.3060 12 16 5.1597 6.8089 1.5676 13 8 6.3774 6.9101 2.2929 14 8 3.9098 6.7398 2.2400 15 8 5.0879 8.1050 0.7730 16 6 3.8925 8.3148 0.1659 17 6 3.7310 7.9923 -1.1764 18 6 4.8832 7.4112 -1.9547 19 8 5.4186 8.4073 -2.8283 20 14 4.2854 5.9606 -2.9593 21 6 2.5213 8.2087 -1.7978 22 6 1.4518 8.7433 -1.0738 23 6 0.1530 8.9718 -1.7338 24 8 0.0098 8.6902 -2.9070 25 8 -0.8750 9.4928 -1.0356 26 6 -2.1240 9.6898 -1.7494 27 6 1.6188 9.0668 0.2762 28 6 2.8330 8.8520 0.8882 29 6 5.4582 2.9680 0.0013 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8901 33 1 1.8934 -0.5139 -0.8898 34 1 1.8933 -0.5138 0.8901 35 1 4.0374 2.8516 2.2079 36 1 3.2286 4.3444 1.5610 37 1 4.3952 5.5464 -0.3347 38 1 6.1706 5.6689 -0.2967 39 1 5.6582 7.0797 -1.2634 40 1 5.8288 9.1533 -2.3696 41 1 5.4055 5.3983 -3.7557 42 1 3.7263 4.9176 -2.0622 43 1 2.3980 7.9621 -2.8420 44 1 -2.4818 8.7319 -2.1267 45 1 -2.8659 10.1144 -1.0731 46 1 -1.9617 10.3714 -2.5843 47 1 0.7963 9.4841 0.8379 48 1 2.9626 9.1011 1.9311 49 1 5.8903 3.2423 -0.9612 50 1 5.9124 2.0753 0.4313 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_2787268_15494190.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:58:57 Heat of formation + Delta-G solvation = -274.868150 kcal Electronic energy + Delta-G solvation = -43241.854136 eV Core-core repulsion = 37438.783657 eV Total energy + Delta-G solvation = -5803.070478 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.116 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -49.24447 -42.85174 -42.02332 -41.51700 -39.78748 -39.48855 -38.74105 -37.82927 -37.68931 -37.58026 -37.48997 -33.38563 -32.79116 -32.26431 -31.81884 -28.74774 -27.65872 -27.45629 -26.86757 -25.77326 -24.10272 -23.56580 -22.92631 -22.45776 -21.61549 -20.61827 -20.11010 -19.58697 -19.33309 -19.06120 -18.70947 -18.30100 -18.21623 -17.95147 -17.73140 -17.42646 -17.16717 -17.07536 -16.83324 -16.54708 -16.39673 -15.99376 -15.85784 -15.59395 -15.23165 -15.08486 -14.99639 -14.68874 -14.65109 -14.52846 -14.39645 -14.29950 -14.20408 -13.98271 -13.79616 -13.73798 -13.68477 -13.60845 -13.35280 -13.23667 -13.06617 -13.05550 -12.86580 -12.76018 -12.72622 -12.54067 -12.26399 -12.05816 -11.82873 -11.80077 -11.68573 -11.61758 -11.59445 -11.53224 -11.37818 -10.40952 -10.34738 -4.99283 -1.64760 -0.76219 -0.18333 0.57601 0.88814 1.09075 1.13747 1.38584 1.45494 1.54899 1.83611 2.03073 2.21829 2.34927 2.48724 2.56800 2.77580 2.97599 3.05821 3.09308 3.27260 3.42135 3.43654 3.55419 3.59524 3.65853 3.73929 3.82807 3.84885 3.94561 3.98260 4.00316 4.12070 4.26513 4.29087 4.30376 4.31984 4.37938 4.40451 4.45305 4.56187 4.59127 4.71006 4.76855 4.79043 4.82830 4.85735 4.88059 4.92144 5.09439 5.25676 5.30195 5.34859 6.47278 6.51061 6.55443 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.355 6.355 4 C 0.476 3.524 5 O -0.531 6.531 6 C -0.113 4.113 7 H 0.162 0.838 8 C -0.149 4.149 9 C 0.096 3.904 10 F -0.195 7.195 11 C -0.682 4.682 12 S 2.598 3.402 13 O -0.942 6.942 14 O -0.942 6.942 15 O -0.657 6.657 16 C 0.083 3.917 17 C -0.132 4.132 18 C -0.102 4.102 19 O -0.533 6.533 20 Si 0.754 3.246 21 C -0.023 4.023 22 C -0.106 4.106 23 C 0.510 3.490 24 O -0.518 6.518 25 O -0.353 6.353 26 C 0.029 3.971 27 C -0.028 4.028 28 C -0.106 4.106 29 C -0.123 4.123 30 H 0.096 0.904 31 H 0.069 0.931 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.068 0.932 35 H 0.116 0.884 36 H 0.126 0.874 37 H 0.174 0.826 38 H 0.188 0.812 39 H 0.078 0.922 40 H 0.384 0.616 41 H -0.269 1.269 42 H -0.211 1.211 43 H 0.176 0.824 44 H 0.067 0.933 45 H 0.131 0.869 46 H 0.065 0.935 47 H 0.181 0.819 48 H 0.164 0.836 49 H 0.118 0.882 50 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.066 2.106 -3.267 8.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.021 4.021 3 O -0.272 6.272 4 C 0.320 3.680 5 O -0.420 6.420 6 C -0.131 4.131 7 H 0.179 0.821 8 C -0.186 4.186 9 C 0.077 3.923 10 F -0.175 7.175 11 C -0.807 4.807 12 S 2.694 3.306 13 O -0.940 6.940 14 O -0.940 6.940 15 O -0.615 6.615 16 C 0.042 3.958 17 C -0.135 4.135 18 C -0.209 4.209 19 O -0.341 6.341 20 Si 0.651 3.349 21 C -0.040 4.040 22 C -0.109 4.109 23 C 0.355 3.645 24 O -0.408 6.408 25 O -0.269 6.269 26 C -0.064 4.064 27 C -0.046 4.046 28 C -0.126 4.126 29 C -0.161 4.161 30 H 0.114 0.886 31 H 0.088 0.912 32 H 0.090 0.910 33 H 0.089 0.911 34 H 0.087 0.913 35 H 0.135 0.865 36 H 0.144 0.856 37 H 0.192 0.808 38 H 0.206 0.794 39 H 0.096 0.904 40 H 0.234 0.766 41 H -0.194 1.194 42 H -0.135 1.135 43 H 0.193 0.807 44 H 0.086 0.914 45 H 0.149 0.851 46 H 0.083 0.917 47 H 0.198 0.802 48 H 0.182 0.818 49 H 0.136 0.864 50 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -7.903 0.922 -3.538 8.708 hybrid contribution 1.567 0.231 0.855 1.800 sum -6.336 1.152 -2.683 6.976 Atomic orbital electron populations 1.21836 0.90522 1.04330 1.03902 1.23318 0.97050 0.79008 1.02686 1.86513 1.23628 1.33806 1.83210 1.23496 0.80905 0.92149 0.71449 1.90696 1.61158 1.43822 1.46352 1.22586 0.97178 0.91595 1.01761 0.82057 1.23928 0.95547 1.02433 0.96719 1.21672 0.89238 0.93618 0.87778 1.92982 1.66467 1.97278 1.60781 1.31661 1.16425 1.12301 1.20320 1.05405 0.74514 0.74934 0.75763 1.93664 1.47767 1.84184 1.68386 1.93654 1.43927 1.84692 1.71730 1.85734 1.42384 1.60123 1.73306 1.18545 0.80816 1.04363 0.92119 1.20409 0.97577 1.03510 0.91961 1.26091 0.94417 1.01486 0.98919 1.86748 1.77993 1.34990 1.34320 0.92222 0.87021 0.72208 0.83488 1.21170 0.88754 0.92815 1.01304 1.19356 0.91529 1.04906 0.95063 1.21045 0.84901 0.73948 0.84575 1.90893 1.83824 1.48550 1.17493 1.86529 1.22103 1.74291 1.44015 1.23621 0.81317 1.02768 0.98671 1.21715 0.97289 0.92971 0.92599 1.21672 0.91552 0.97090 1.02240 1.23652 0.93926 0.97368 1.01183 0.88558 0.91201 0.90995 0.91091 0.91345 0.86547 0.85605 0.80811 0.79413 0.90411 0.76639 1.19370 1.13484 0.80727 0.91413 0.85126 0.91670 0.80194 0.81838 0.86396 0.86935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.72 10.29 71.98 0.74 1.47 16 2 C 0.05 -0.02 6.19 71.98 0.45 0.43 16 3 O -0.36 -0.68 10.22 -51.38 -0.53 -1.21 16 4 C 0.48 1.45 7.48 71.24 0.53 1.99 16 5 O -0.53 -4.87 15.65 21.94 0.34 -4.53 16 6 C -0.11 0.30 3.91 -11.02 -0.04 0.26 16 7 H 0.16 -1.33 5.75 -2.39 -0.01 -1.34 16 8 C -0.15 0.32 7.09 31.12 0.22 0.54 16 9 C 0.10 -0.05 1.79 -10.28 -0.02 -0.07 16 10 F -0.19 -1.17 16.31 44.97 0.73 -0.43 16 11 C -0.68 2.58 3.20 71.98 0.23 2.81 16 12 S 2.60 7.32 4.88 -56.49 -0.28 7.05 16 13 O -0.94 -10.78 17.53 -118.57 -2.08 -12.86 16 14 O -0.94 -3.68 15.21 -118.57 -1.80 -5.48 16 15 O -0.66 -0.29 9.04 -59.35 -0.54 -0.82 16 16 C 0.08 -0.17 4.90 22.64 0.11 -0.05 16 17 C -0.13 0.59 4.18 -19.81 -0.08 0.50 16 18 C -0.10 0.53 2.09 71.23 0.15 0.68 16 19 O -0.53 1.95 12.63 -148.98 -1.88 0.07 16 20 Si 0.75 -5.10 29.07 68.60 1.99 -3.11 16 21 C -0.02 0.11 8.22 22.52 0.19 0.30 16 22 C -0.11 0.42 5.87 -20.09 -0.12 0.30 16 23 C 0.51 -0.43 7.89 70.26 0.55 0.12 16 24 O -0.52 -2.06 16.13 19.82 0.32 -1.74 16 25 O -0.35 1.07 9.81 -56.54 -0.55 0.51 16 26 C 0.03 -0.19 10.57 113.37 1.20 1.01 16 27 C -0.03 0.17 9.61 22.52 0.22 0.38 16 28 C -0.11 0.37 8.56 22.32 0.19 0.56 16 29 C -0.12 0.25 6.88 31.11 0.21 0.46 16 30 H 0.10 -0.72 8.14 -2.39 -0.02 -0.74 16 31 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 32 H 0.07 -0.37 8.14 -2.38 -0.02 -0.39 16 33 H 0.07 -0.01 8.13 -2.39 -0.02 -0.03 16 34 H 0.07 0.02 8.13 -2.38 -0.02 0.00 16 35 H 0.12 -0.19 8.09 -2.39 -0.02 -0.21 16 36 H 0.13 -0.65 7.51 -2.39 -0.02 -0.67 16 37 H 0.17 -1.51 3.39 -2.39 -0.01 -1.52 16 38 H 0.19 -1.74 6.84 -2.39 -0.02 -1.76 16 39 H 0.08 -0.58 4.03 -2.38 -0.01 -0.59 16 40 H 0.38 -3.17 9.12 -74.05 -0.68 -3.84 16 41 H -0.27 0.23 7.11 99.48 0.71 0.94 16 42 H -0.21 2.21 4.44 99.48 0.44 2.65 16 43 H 0.18 -1.27 6.26 -2.91 -0.02 -1.28 16 44 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 45 H 0.13 -1.52 8.14 -2.38 -0.02 -1.54 16 46 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 47 H 0.18 -1.86 7.60 -2.91 -0.02 -1.88 16 48 H 0.16 -0.83 7.90 -2.91 -0.02 -0.85 16 49 H 0.12 -0.76 8.10 -2.38 -0.02 -0.78 16 50 H 0.11 0.11 7.44 -2.39 -0.02 0.09 16 Total: 0.00 -26.40 423.87 0.59 -25.81 By element: Atomic # 1 Polarization: -15.07 SS G_CDS: 0.13 Total: -14.94 kcal Atomic # 6 Polarization: 6.96 SS G_CDS: 4.73 Total: 11.68 kcal Atomic # 8 Polarization: -19.34 SS G_CDS: -6.72 Total: -26.06 kcal Atomic # 9 Polarization: -1.17 SS G_CDS: 0.73 Total: -0.43 kcal Atomic # 14 Polarization: -5.10 SS G_CDS: 1.99 Total: -3.11 kcal Atomic # 16 Polarization: 7.32 SS G_CDS: -0.28 Total: 7.05 kcal Total: -26.40 0.59 -25.81 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_2787268_15494190.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -249.059 kcal (2) G-P(sol) polarization free energy of solvation -26.401 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -275.461 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.592 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.809 kcal (6) G-S(sol) free energy of system = (1) + (5) -274.868 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds