Wall clock time and date at job start Mon Mar 8 2021 12:18:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.45201 * 109.47389 * 2 1 4 4 C 1.34231 * 117.00451 * 180.02562 * 3 2 1 5 5 O 1.20824 * 119.99918 * 0.02562 * 4 3 2 6 6 C 1.50703 * 119.99919 * 180.02562 * 4 3 2 7 7 H 1.08993 * 112.90996 * 48.75103 * 6 4 3 8 8 C 1.53776 * 113.61130 * 180.02562 * 6 4 3 9 9 C 1.53784 * 87.17402 * 139.93627 * 8 6 4 10 10 F 1.39899 * 113.61098 * 89.15733 * 9 8 6 11 11 C 1.52995 * 113.61440 * 220.05553 * 9 8 6 12 12 S 1.81402 * 109.47329 * 179.97438 * 11 9 8 13 13 O 1.42095 * 110.54124 * 291.63222 * 12 11 9 14 14 O 1.42103 * 110.53709 * 68.37860 * 12 11 9 15 15 O 1.52198 * 104.44975 * 180.02562 * 12 11 9 16 16 C 1.35691 * 114.00072 * 74.16630 * 15 12 11 17 17 C 1.38994 * 119.90917 * 262.73079 * 16 15 12 18 18 C 1.50696 * 119.95072 * 359.97438 * 17 16 15 19 19 O 1.42904 * 109.47166 * 253.55707 * 18 17 16 20 20 Si 1.86298 * 109.47572 * 133.55651 * 18 17 16 21 21 C 1.37694 * 120.09611 * 179.97438 * 17 16 15 22 22 C 1.39778 * 119.90465 * 359.97438 * 21 17 16 23 23 C 1.47469 * 120.09232 * 179.97438 * 22 21 17 24 24 O 1.21503 * 119.99813 * 359.97438 * 23 22 21 25 25 O 1.34744 * 120.00217 * 179.97438 * 23 22 21 26 26 C 1.45199 * 117.00328 * 179.97438 * 25 23 22 27 27 C 1.39807 * 119.81746 * 359.97438 * 22 21 17 28 28 C 1.37665 * 119.90217 * 359.76721 * 27 22 21 29 29 C 1.53786 * 113.61204 * 277.49766 * 6 4 3 30 30 H 1.08995 * 109.47562 * 59.99741 * 1 2 3 31 31 H 1.09000 * 109.47112 * 180.02562 * 1 2 3 32 32 H 1.09010 * 109.46828 * 299.99629 * 1 2 3 33 33 H 1.09004 * 109.47212 * 240.00209 * 2 1 3 34 34 H 1.09003 * 109.47685 * 119.99941 * 2 1 3 35 35 H 1.09003 * 113.61329 * 254.52522 * 8 6 4 36 36 H 1.08996 * 113.61847 * 25.34208 * 8 6 4 37 37 H 1.09000 * 109.47836 * 300.00279 * 11 9 8 38 38 H 1.09004 * 109.46873 * 60.00019 * 11 9 8 39 39 H 1.08996 * 109.47382 * 13.55211 * 18 17 16 40 40 H 0.96697 * 113.99814 * 66.48672 * 19 18 17 41 41 H 1.48501 * 109.99709 * 299.99974 * 20 18 17 42 42 H 1.48501 * 109.99729 * 61.31424 * 20 18 17 43 43 H 1.07997 * 120.05118 * 179.97438 * 21 17 16 44 44 H 1.08996 * 109.47361 * 300.00657 * 26 25 23 45 45 H 1.09010 * 109.46372 * 60.00286 * 26 25 23 46 46 H 1.08996 * 109.47430 * 179.97438 * 26 25 23 47 47 H 1.07995 * 120.05064 * 180.02562 * 27 22 21 48 48 H 1.08003 * 119.94992 * 180.25305 * 28 27 22 49 49 H 1.08998 * 113.61276 * 334.56890 * 29 6 4 50 50 H 1.09002 * 113.61221 * 105.38859 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0808 0.5867 -0.0015 6 6 3.9207 2.9375 0.0000 7 1 3.4715 3.5821 0.7554 8 6 5.4581 2.9682 -0.0013 9 6 5.3580 4.1427 -0.9890 10 9 5.2871 5.3936 -0.3666 11 6 6.3997 4.0926 -2.1084 12 16 6.1803 5.5225 -3.2029 13 8 4.9623 5.4142 -3.9267 14 8 6.5276 6.7243 -2.5288 15 8 7.2614 5.3596 -4.2618 16 6 7.0027 4.3845 -5.1692 17 6 7.5624 3.1224 -5.0090 18 6 8.4556 2.8399 -3.8285 19 8 9.8135 2.7606 -4.2668 20 14 7.9598 1.2228 -3.0475 21 6 7.3021 2.1299 -5.9272 22 6 6.4730 2.3929 -7.0214 23 6 6.1919 1.3331 -8.0076 24 8 6.6814 0.2297 -7.8698 25 8 5.3920 1.5885 -9.0615 26 6 5.1597 0.4985 -9.9922 27 6 5.9111 3.6634 -7.1783 28 6 6.1724 4.6484 -6.2528 29 6 3.9855 3.5778 -1.3967 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3633 0.5138 0.8901 33 1 1.8933 -0.5138 -0.8900 34 1 1.8934 -0.5138 0.8900 35 1 5.8902 3.2426 0.9610 36 1 5.9123 2.0748 -0.4299 37 1 7.3998 4.1160 -1.6755 38 1 6.2733 3.1741 -2.6815 39 1 8.3561 3.6421 -3.0974 40 1 10.1707 3.5976 -4.5936 41 1 6.5496 1.2923 -2.5874 42 1 8.1214 0.1163 -4.0246 43 1 7.7377 1.1496 -5.8021 44 1 6.1098 0.1749 -10.4172 45 1 4.6941 -0.3351 -9.4663 46 1 4.5004 0.8373 -10.7912 47 1 5.2698 3.8706 -8.0221 48 1 5.7354 5.6290 -6.3711 49 1 4.0372 2.8516 -2.2079 50 1 3.2274 4.3434 -1.5616 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_2787268_16464788.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:18:27 Heat of formation + Delta-G solvation = -273.088658 kcal Electronic energy + Delta-G solvation = -43070.613340 eV Core-core repulsion = 37267.620026 eV Total energy + Delta-G solvation = -5802.993314 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.116 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -49.29388 -42.92584 -41.85839 -41.60635 -39.66810 -39.44984 -38.57363 -37.95269 -37.57888 -37.50793 -37.42271 -33.61313 -32.90537 -32.41373 -32.19101 -28.97768 -27.67400 -27.49833 -26.79806 -25.91059 -24.09234 -23.73605 -22.95775 -22.36360 -21.54559 -21.04941 -20.00465 -19.54926 -19.23590 -19.16894 -18.72829 -18.41589 -18.19128 -17.80872 -17.67666 -17.54970 -17.39332 -17.19293 -16.65266 -16.53805 -16.30529 -16.15875 -15.99011 -15.61303 -15.41824 -15.24430 -14.88964 -14.78675 -14.68100 -14.64444 -14.49939 -14.35747 -14.19976 -14.04772 -13.87088 -13.83638 -13.58625 -13.48529 -13.34219 -13.30220 -13.24123 -13.09740 -13.05104 -12.99650 -12.71310 -12.59477 -12.09228 -12.06674 -11.96269 -11.89328 -11.68569 -11.63129 -11.60255 -11.52251 -11.43789 -10.62098 -10.51206 -5.18436 -1.61212 -0.83242 -0.39169 0.59370 0.91110 1.00482 1.03107 1.30386 1.36988 1.47970 1.70373 2.06372 2.13635 2.36654 2.50730 2.52968 2.68524 2.86549 3.00237 3.03568 3.13406 3.27236 3.29371 3.42462 3.49430 3.52334 3.59977 3.67163 3.78898 3.88135 3.92362 3.94019 4.03018 4.07456 4.12911 4.14571 4.19051 4.20726 4.22205 4.37484 4.42705 4.46874 4.51923 4.53532 4.62478 4.64599 4.68270 4.74160 4.83759 4.95860 5.09330 5.12742 5.35496 6.22399 6.44764 6.61238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.474 3.526 5 O -0.501 6.501 6 C -0.108 4.108 7 H 0.140 0.860 8 C -0.124 4.124 9 C 0.106 3.894 10 F -0.168 7.168 11 C -0.691 4.691 12 S 2.591 3.409 13 O -0.932 6.932 14 O -0.895 6.895 15 O -0.656 6.656 16 C 0.102 3.898 17 C -0.135 4.135 18 C -0.091 4.091 19 O -0.521 6.521 20 Si 0.734 3.266 21 C -0.031 4.031 22 C -0.105 4.105 23 C 0.508 3.492 24 O -0.493 6.493 25 O -0.351 6.351 26 C 0.036 3.964 27 C -0.037 4.037 28 C -0.096 4.096 29 C -0.145 4.145 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.068 0.932 33 H 0.071 0.929 34 H 0.073 0.927 35 H 0.107 0.893 36 H 0.123 0.877 37 H 0.166 0.834 38 H 0.150 0.850 39 H 0.072 0.928 40 H 0.374 0.626 41 H -0.232 1.232 42 H -0.236 1.236 43 H 0.159 0.841 44 H 0.068 0.932 45 H 0.067 0.933 46 H 0.108 0.892 47 H 0.162 0.838 48 H 0.160 0.840 49 H 0.113 0.887 50 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.998 -1.946 -0.730 2.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.317 3.683 5 O -0.388 6.388 6 C -0.127 4.127 7 H 0.158 0.842 8 C -0.162 4.162 9 C 0.086 3.914 10 F -0.148 7.148 11 C -0.815 4.815 12 S 2.684 3.316 13 O -0.930 6.930 14 O -0.893 6.893 15 O -0.615 6.615 16 C 0.060 3.940 17 C -0.138 4.138 18 C -0.199 4.199 19 O -0.327 6.327 20 Si 0.629 3.371 21 C -0.049 4.049 22 C -0.107 4.107 23 C 0.352 3.648 24 O -0.381 6.381 25 O -0.267 6.267 26 C -0.057 4.057 27 C -0.056 4.056 28 C -0.116 4.116 29 C -0.183 4.183 30 H 0.087 0.913 31 H 0.101 0.899 32 H 0.087 0.913 33 H 0.089 0.911 34 H 0.091 0.909 35 H 0.125 0.875 36 H 0.141 0.859 37 H 0.184 0.816 38 H 0.168 0.832 39 H 0.090 0.910 40 H 0.223 0.777 41 H -0.156 1.156 42 H -0.159 1.159 43 H 0.177 0.823 44 H 0.086 0.914 45 H 0.086 0.914 46 H 0.127 0.873 47 H 0.180 0.820 48 H 0.178 0.822 49 H 0.131 0.869 50 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -2.357 -3.146 -0.818 4.015 hybrid contribution 0.106 0.722 -0.690 1.004 sum -2.251 -2.424 -1.508 3.635 Atomic orbital electron populations 1.21828 0.92184 1.03345 1.03773 1.23129 0.95745 0.79593 1.02845 1.86518 1.23992 1.32984 1.83506 1.23201 0.80930 0.91815 0.72397 1.90692 1.60520 1.42674 1.44914 1.22463 0.97205 0.92169 1.00902 0.84193 1.23645 0.93913 0.97681 1.00939 1.21138 0.95135 0.82385 0.92726 1.93025 1.96981 1.41318 1.83445 1.31748 1.10264 1.24900 1.14538 1.05792 0.73980 0.76535 0.75277 1.93685 1.45310 1.86729 1.67321 1.93716 1.81959 1.39644 1.74009 1.85742 1.68338 1.58040 1.49353 1.18215 1.00195 0.84569 0.91010 1.20430 1.01600 0.91819 0.99907 1.25782 0.84730 1.14395 0.95023 1.86773 1.22748 1.38143 1.85009 0.93114 0.81839 0.74554 0.87550 1.21138 0.93486 0.99747 0.90549 1.19321 1.01966 0.93738 0.95693 1.20860 0.76277 0.87026 0.80665 1.90908 1.48510 1.23985 1.74655 1.86527 1.62226 1.43295 1.34699 1.23409 1.02635 0.88588 0.91106 1.21545 0.95719 0.90230 0.98069 1.21499 0.96137 1.02003 0.91929 1.23809 0.95981 1.01840 0.96640 0.91307 0.89923 0.91260 0.91062 0.90897 0.87490 0.85921 0.81607 0.83167 0.91005 0.77717 1.15650 1.15898 0.82324 0.91367 0.91417 0.87346 0.81997 0.82245 0.86904 0.86952 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.30 10.29 37.15 0.38 0.68 16 2 C 0.06 -0.01 6.19 37.15 0.23 0.22 16 3 O -0.35 -0.39 10.22 -39.26 -0.40 -0.79 16 4 C 0.47 0.55 7.48 36.01 0.27 0.82 16 5 O -0.50 -1.74 15.65 -18.75 -0.29 -2.04 16 6 C -0.11 0.13 4.24 -90.96 -0.39 -0.25 16 7 H 0.14 -0.40 8.14 -51.93 -0.42 -0.82 16 8 C -0.12 0.24 6.85 -25.92 -0.18 0.06 16 9 C 0.11 -0.10 1.63 -89.74 -0.15 -0.24 16 10 F -0.17 -0.17 16.29 2.25 0.04 -0.14 16 11 C -0.69 1.11 3.27 37.16 0.12 1.24 16 12 S 2.59 3.48 4.88 -107.50 -0.53 2.95 16 13 O -0.93 -2.17 15.81 -67.04 -1.06 -3.23 16 14 O -0.90 -4.19 17.54 -67.03 -1.18 -5.36 16 15 O -0.66 -0.38 9.05 -51.10 -0.46 -0.84 16 16 C 0.10 0.03 4.91 -39.00 -0.19 -0.16 16 17 C -0.13 0.01 4.18 -104.54 -0.44 -0.43 16 18 C -0.09 0.12 2.09 36.00 0.08 0.20 16 19 O -0.52 0.50 12.63 -35.23 -0.44 0.06 16 20 Si 0.73 -1.06 29.25 -169.99 -4.97 -6.03 16 21 C -0.03 -0.02 8.22 -39.20 -0.32 -0.35 16 22 C -0.11 -0.06 5.87 -104.97 -0.62 -0.68 16 23 C 0.51 0.97 7.89 34.49 0.27 1.24 16 24 O -0.49 -2.25 16.13 -19.27 -0.31 -2.57 16 25 O -0.35 -0.12 9.81 -40.61 -0.40 -0.52 16 26 C 0.04 -0.06 10.57 101.05 1.07 1.01 16 27 C -0.04 0.04 9.61 -39.20 -0.38 -0.34 16 28 C -0.10 0.04 8.57 -39.49 -0.34 -0.30 16 29 C -0.15 0.18 7.08 -25.84 -0.18 0.00 16 30 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 32 H 0.07 -0.13 8.14 -51.92 -0.42 -0.55 16 33 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 34 H 0.07 -0.02 8.13 -51.93 -0.42 -0.45 16 35 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 36 H 0.12 -0.26 7.32 -51.93 -0.38 -0.64 16 37 H 0.17 -0.80 6.82 -51.92 -0.35 -1.16 16 38 H 0.15 -0.41 3.72 -51.92 -0.19 -0.60 16 39 H 0.07 -0.25 4.01 -51.93 -0.21 -0.45 16 40 H 0.37 -1.36 9.12 45.56 0.42 -0.94 16 41 H -0.23 0.33 6.21 56.52 0.35 0.68 16 42 H -0.24 -0.29 6.60 56.52 0.37 0.08 16 43 H 0.16 0.20 5.98 -52.49 -0.31 -0.12 16 44 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.07 -0.11 8.14 -51.92 -0.42 -0.53 16 46 H 0.11 -0.46 8.14 -51.93 -0.42 -0.88 16 47 H 0.16 -0.54 7.60 -52.49 -0.40 -0.93 16 48 H 0.16 -0.28 7.92 -52.48 -0.42 -0.70 16 49 H 0.11 -0.22 7.91 -51.93 -0.41 -0.63 16 50 H 0.11 -0.22 8.14 -51.93 -0.42 -0.65 16 LS Contribution 428.94 15.07 6.46 6.46 Total: 0.00 -11.09 428.94 -10.48 -21.58 By element: Atomic # 1 Polarization: -6.07 SS G_CDS: -6.19 Total: -12.26 kcal Atomic # 6 Polarization: 3.47 SS G_CDS: -0.76 Total: 2.71 kcal Atomic # 8 Polarization: -10.73 SS G_CDS: -4.55 Total: -15.28 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.04 Total: -0.14 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -4.97 Total: -6.03 kcal Atomic # 16 Polarization: 3.48 SS G_CDS: -0.53 Total: 2.95 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -11.09 -10.48 -21.58 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_2787268_16464788.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -251.512 kcal (2) G-P(sol) polarization free energy of solvation -11.092 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -262.604 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.485 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.577 kcal (6) G-S(sol) free energy of system = (1) + (5) -273.089 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds