Wall clock time and date at job start Mon Mar 8 2021 12:22:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45199 * 109.46993 * 2 1 4 4 C 1.34231 * 116.99765 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00171 * 0.02562 * 4 3 2 6 6 C 1.50699 * 120.00076 * 180.02562 * 4 3 2 7 7 H 1.09004 * 112.90600 * 311.24984 * 6 4 3 8 8 C 1.54050 * 113.62157 * 82.50392 * 6 4 3 9 9 C 1.53784 * 86.98580 * 139.98099 * 8 6 4 10 10 F 1.39901 * 113.61272 * 219.98155 * 9 8 6 11 11 C 1.53001 * 113.61696 * 89.16189 * 9 8 6 12 12 S 1.81400 * 109.46993 * 80.86361 * 11 9 8 13 13 O 1.42103 * 110.54195 * 285.84919 * 12 11 9 14 14 O 1.42095 * 110.54407 * 62.60160 * 12 11 9 15 15 O 1.52205 * 104.44676 * 174.22848 * 12 11 9 16 16 C 1.35910 * 114.00042 * 74.49344 * 15 12 11 17 17 C 1.38703 * 120.47178 * 95.53192 * 16 15 12 18 18 C 1.50704 * 119.66177 * 359.97438 * 17 16 15 19 19 O 1.42908 * 109.46704 * 38.47651 * 18 17 16 20 20 Si 1.86298 * 109.47379 * 158.47209 * 18 17 16 21 21 N 1.31845 * 120.68188 * 179.70334 * 17 16 15 22 22 C 1.31843 * 121.78189 * 0.58235 * 21 17 16 23 23 C 1.50702 * 119.56124 * 179.68226 * 22 21 17 24 24 C 1.38255 * 120.88455 * 359.70554 * 22 21 17 25 25 C 1.38538 * 119.22088 * 0.02562 * 24 22 21 26 26 C 1.53784 * 113.61508 * 180.02562 * 6 4 3 27 27 H 1.08997 * 109.46919 * 59.99613 * 1 2 3 28 28 H 1.08994 * 109.47102 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.46878 * 300.00110 * 1 2 3 30 30 H 1.09003 * 109.47160 * 240.00579 * 2 1 3 31 31 H 1.08997 * 109.47439 * 120.00458 * 2 1 3 32 32 H 1.09000 * 113.61149 * 25.47896 * 8 6 4 33 33 H 1.08997 * 113.69783 * 254.49530 * 8 6 4 34 34 H 1.08999 * 109.47192 * 200.86627 * 11 9 8 35 35 H 1.09007 * 109.46710 * 320.86351 * 11 9 8 36 36 H 1.08993 * 109.47072 * 278.47652 * 18 17 16 37 37 H 0.96692 * 113.99916 * 65.84101 * 19 18 17 38 38 H 1.48505 * 109.99764 * 58.68391 * 20 18 17 39 39 H 1.48500 * 110.00464 * 180.02562 * 20 18 17 40 40 H 1.09000 * 109.47064 * 270.02338 * 23 22 21 41 41 H 1.08997 * 109.46895 * 30.02446 * 23 22 21 42 42 H 1.08998 * 109.46945 * 150.02265 * 23 22 21 43 43 H 1.07999 * 120.38912 * 180.02562 * 24 22 21 44 44 H 1.08000 * 120.81295 * 180.02562 * 25 24 22 45 45 H 1.08997 * 113.61411 * 105.46700 * 26 6 4 46 46 H 1.08999 * 113.68989 * 334.57310 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9374 0.0012 7 1 3.4714 3.5827 -0.7537 8 6 3.9860 3.5777 1.4007 9 6 5.3562 4.1422 0.9895 10 9 6.3099 4.0987 2.0121 11 6 5.2764 5.5103 0.3093 12 16 5.1145 6.8041 1.5704 13 8 3.8040 6.8036 2.1199 14 8 6.2608 6.8286 2.4097 15 8 5.1933 8.1079 0.7891 16 6 4.0688 8.3981 0.0830 17 6 3.0990 9.2337 0.6170 18 6 3.2956 9.8221 1.9904 19 8 4.6694 10.1747 2.1653 20 14 2.2361 11.3438 2.1715 21 7 2.0093 9.5226 -0.0667 22 6 1.7918 9.0265 -1.2687 23 6 0.5253 9.3846 -2.0027 24 6 2.7098 8.1818 -1.8646 25 6 3.8713 7.8564 -1.1832 26 6 5.4583 2.9680 0.0011 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 1.8933 -0.5138 -0.8901 31 1 1.8934 -0.5139 0.8899 32 1 4.0387 2.8509 2.2113 33 1 3.2299 4.3449 1.5672 34 1 6.1827 5.6806 -0.2718 35 1 4.4104 5.5372 -0.3522 36 1 3.0098 9.0886 2.7443 37 1 4.9689 10.8888 1.5863 38 1 0.8078 10.9963 1.9603 39 1 2.4213 11.9340 3.5216 40 1 -0.2527 8.6609 -1.7595 41 1 0.2010 10.3811 -1.7030 42 1 0.7115 9.3708 -3.0766 43 1 2.5236 7.7804 -2.8498 44 1 4.6060 7.1993 -1.6246 45 1 5.8895 3.2434 -0.9613 46 1 5.9141 2.0753 0.4292 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_3313794_15494190.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:22:28 Heat of formation + Delta-G solvation = -192.510265 kcal Electronic energy + Delta-G solvation = -36380.522777 eV Core-core repulsion = 31281.188218 eV Total energy + Delta-G solvation = -5099.334559 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.112 amu Computer time = 2.38 seconds Orbital eigenvalues (eV) -49.05311 -42.82029 -41.93816 -40.43786 -39.70180 -38.33725 -37.94351 -37.57227 -37.21089 -34.13433 -33.77425 -32.87851 -31.72015 -29.24155 -27.59964 -27.46669 -27.25714 -24.49111 -24.06127 -23.54958 -22.45267 -21.98090 -20.65334 -19.86995 -19.37685 -18.98324 -18.83281 -18.29549 -18.12987 -17.78774 -17.48128 -17.14320 -16.88835 -16.69252 -16.48614 -16.22240 -16.05506 -15.56137 -15.45893 -15.34158 -15.04369 -14.94691 -14.58475 -14.46453 -14.27330 -14.11689 -14.02676 -13.86409 -13.84309 -13.78205 -13.38487 -13.35005 -13.29362 -13.17819 -13.14824 -13.02147 -12.90090 -12.66008 -12.59184 -12.41359 -12.15453 -11.91152 -11.62592 -11.60268 -11.51439 -11.41069 -11.09204 -10.55595 -10.05397 -4.91983 -1.33371 -0.43315 -0.35517 0.84880 0.97947 1.27612 1.44759 1.82782 2.06654 2.18514 2.24674 2.43870 2.62153 2.64691 2.72987 2.77874 2.96449 3.03116 3.13460 3.21438 3.38764 3.49158 3.50972 3.59129 3.69344 3.74049 3.86895 3.90321 3.94723 4.02326 4.18718 4.20622 4.22519 4.29287 4.31840 4.36384 4.40944 4.47834 4.49436 4.50787 4.62078 4.63667 4.72177 4.82901 4.85797 4.93730 5.21383 5.33119 6.37039 6.55044 6.58780 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.354 6.354 4 C 0.475 3.525 5 O -0.499 6.499 6 C -0.107 4.107 7 H 0.134 0.866 8 C -0.150 4.150 9 C 0.103 3.897 10 F -0.176 7.176 11 C -0.679 4.679 12 S 2.599 3.401 13 O -0.942 6.942 14 O -0.896 6.896 15 O -0.635 6.635 16 C 0.026 3.974 17 C 0.144 3.856 18 C -0.091 4.091 19 O -0.528 6.528 20 Si 0.732 3.268 21 N -0.457 5.457 22 C 0.157 3.843 23 C -0.112 4.112 24 C -0.151 4.151 25 C -0.092 4.092 26 C -0.121 4.121 27 H 0.068 0.932 28 H 0.082 0.918 29 H 0.068 0.932 30 H 0.072 0.928 31 H 0.072 0.928 32 H 0.117 0.883 33 H 0.110 0.890 34 H 0.160 0.840 35 H 0.153 0.847 36 H 0.141 0.859 37 H 0.381 0.619 38 H -0.246 1.246 39 H -0.257 1.257 40 H 0.088 0.912 41 H 0.087 0.913 42 H 0.084 0.916 43 H 0.156 0.844 44 H 0.155 0.845 45 H 0.100 0.900 46 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.834 1.631 -9.170 10.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.317 3.683 5 O -0.385 6.385 6 C -0.126 4.126 7 H 0.152 0.848 8 C -0.188 4.188 9 C 0.084 3.916 10 F -0.156 7.156 11 C -0.802 4.802 12 S 2.690 3.310 13 O -0.940 6.940 14 O -0.894 6.894 15 O -0.593 6.593 16 C -0.018 4.018 17 C 0.003 3.997 18 C -0.201 4.201 19 O -0.332 6.332 20 Si 0.630 3.370 21 N -0.171 5.171 22 C 0.019 3.981 23 C -0.169 4.169 24 C -0.170 4.170 25 C -0.119 4.119 26 C -0.159 4.159 27 H 0.087 0.913 28 H 0.101 0.899 29 H 0.087 0.913 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.136 0.864 33 H 0.128 0.872 34 H 0.178 0.822 35 H 0.171 0.829 36 H 0.158 0.842 37 H 0.229 0.771 38 H -0.169 1.169 39 H -0.182 1.182 40 H 0.107 0.893 41 H 0.106 0.894 42 H 0.103 0.897 43 H 0.174 0.826 44 H 0.172 0.828 45 H 0.118 0.882 46 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -5.740 2.157 -7.242 9.489 hybrid contribution 1.184 -2.045 -0.941 2.544 sum -4.556 0.112 -8.182 9.366 Atomic orbital electron populations 1.21828 0.92164 1.03384 1.03730 1.23138 0.95731 0.79525 1.02922 1.86506 1.23937 1.33074 1.83573 1.23102 0.80943 0.91722 0.72535 1.90709 1.60517 1.42633 1.44689 1.22315 0.97287 0.92267 1.00740 0.84828 1.23926 0.95910 1.02154 0.96785 1.21510 0.88967 0.93306 0.87858 1.93026 1.65606 1.97180 1.59835 1.31422 1.14006 1.13868 1.20902 1.05652 0.75308 0.74490 0.75515 1.93637 1.40308 1.84318 1.75736 1.93699 1.51122 1.83696 1.60857 1.85799 1.45035 1.59443 1.68987 1.18722 0.85581 1.04611 0.92898 1.22098 0.88149 0.92306 0.97124 1.25460 0.91713 1.10172 0.92711 1.86580 1.23629 1.58809 1.64164 0.94109 0.79410 0.80187 0.83247 1.67251 1.18845 1.23392 1.07609 1.21624 0.96213 0.90567 0.89706 1.20878 0.92585 1.04112 0.99351 1.21984 0.93411 0.99477 1.02172 1.21988 0.98557 0.99161 0.92202 1.23620 0.93464 0.98195 1.00608 0.91340 0.89880 0.91268 0.90940 0.90925 0.86443 0.87198 0.82245 0.82880 0.84196 0.77119 1.16937 1.18239 0.89313 0.89429 0.89702 0.82648 0.82780 0.88183 0.86016 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 26. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.33 10.29 37.16 0.38 0.71 16 2 C 0.06 -0.02 6.19 37.16 0.23 0.21 16 3 O -0.35 -0.31 10.22 -39.26 -0.40 -0.71 16 4 C 0.47 0.55 7.49 36.00 0.27 0.82 16 5 O -0.50 -2.00 15.65 -18.75 -0.29 -2.29 16 6 C -0.11 0.18 3.91 -90.82 -0.36 -0.17 16 7 H 0.13 -0.64 7.64 -51.93 -0.40 -1.04 16 8 C -0.15 0.10 7.11 -25.78 -0.18 -0.08 16 9 C 0.10 -0.01 1.76 -89.78 -0.16 -0.17 16 10 F -0.18 -0.59 16.14 2.25 0.04 -0.56 16 11 C -0.68 1.48 4.66 37.16 0.17 1.65 16 12 S 2.60 6.64 5.00 -107.50 -0.54 6.10 16 13 O -0.94 -3.71 14.86 -67.04 -1.00 -4.71 16 14 O -0.90 -6.06 17.26 -67.04 -1.16 -7.22 16 15 O -0.64 -1.02 8.16 -54.81 -0.45 -1.47 16 16 C 0.03 0.01 4.59 -39.08 -0.18 -0.17 16 17 C 0.14 0.19 5.73 -82.41 -0.47 -0.28 16 18 C -0.09 -0.18 2.44 36.01 0.09 -0.09 16 19 O -0.53 -1.03 11.14 -56.55 -0.63 -1.66 16 20 Si 0.73 0.26 31.65 -169.99 -5.38 -5.12 16 21 N -0.46 -0.25 8.04 -5.62 -0.05 -0.29 16 22 C 0.16 -0.31 6.78 -82.58 -0.56 -0.87 16 23 C -0.11 0.49 10.17 36.01 0.37 0.86 16 24 C -0.15 0.59 9.73 -39.46 -0.38 0.20 16 25 C -0.09 0.28 8.55 -39.14 -0.33 -0.05 16 26 C -0.12 0.17 6.89 -25.90 -0.18 -0.01 16 27 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 28 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 30 H 0.07 -0.03 8.13 -51.93 -0.42 -0.46 16 31 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 32 H 0.12 -0.07 8.10 -51.93 -0.42 -0.49 16 33 H 0.11 -0.16 7.53 -51.93 -0.39 -0.55 16 34 H 0.16 -0.78 8.14 -51.92 -0.42 -1.20 16 35 H 0.15 -0.87 5.74 -51.92 -0.30 -1.16 16 36 H 0.14 0.47 7.17 -51.93 -0.37 0.10 16 37 H 0.38 -0.94 8.59 45.56 0.39 -0.55 16 38 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 39 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 40 H 0.09 -0.42 8.14 -51.93 -0.42 -0.85 16 41 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 42 H 0.08 -0.54 8.08 -51.93 -0.42 -0.96 16 43 H 0.16 -1.11 8.06 -52.49 -0.42 -1.53 16 44 H 0.15 -1.02 7.04 -52.49 -0.37 -1.39 16 45 H 0.10 -0.37 8.10 -51.93 -0.42 -0.79 16 46 H 0.12 0.00 7.44 -51.93 -0.39 -0.38 16 LS Contribution 397.22 15.07 5.99 5.99 Total: 0.00 -13.02 397.22 -11.25 -24.27 By element: Atomic # 1 Polarization: -8.80 SS G_CDS: -6.08 Total: -14.89 kcal Atomic # 6 Polarization: 3.86 SS G_CDS: -1.30 Total: 2.56 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: -0.05 Total: -0.29 kcal Atomic # 8 Polarization: -14.13 SS G_CDS: -3.93 Total: -18.06 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.04 Total: -0.56 kcal Atomic # 14 Polarization: 0.26 SS G_CDS: -5.38 Total: -5.12 kcal Atomic # 16 Polarization: 6.64 SS G_CDS: -0.54 Total: 6.10 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -13.02 -11.25 -24.27 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_3313794_15494190.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.245 kcal (2) G-P(sol) polarization free energy of solvation -13.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.246 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.265 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.38 seconds