Wall clock time and date at job start Mon Mar 8 2021 12:22:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45199 * 109.46993 * 2 1 4 4 C 1.34231 * 116.99765 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00171 * 0.02562 * 4 3 2 6 6 C 1.50699 * 120.00076 * 180.02562 * 4 3 2 7 7 H 1.09004 * 112.90600 * 311.24984 * 6 4 3 8 8 C 1.54050 * 113.62157 * 82.50392 * 6 4 3 9 9 C 1.53784 * 86.98580 * 139.98099 * 8 6 4 10 10 F 1.39901 * 113.61272 * 219.98155 * 9 8 6 11 11 C 1.53001 * 113.61696 * 89.16189 * 9 8 6 12 12 S 1.81400 * 109.46993 * 80.86361 * 11 9 8 13 13 O 1.42103 * 110.54195 * 285.84919 * 12 11 9 14 14 O 1.42095 * 110.54407 * 62.60160 * 12 11 9 15 15 O 1.52205 * 104.44676 * 174.22848 * 12 11 9 16 16 C 1.35910 * 114.00042 * 74.49344 * 15 12 11 17 17 C 1.38703 * 120.47178 * 95.53192 * 16 15 12 18 18 C 1.50704 * 119.66177 * 359.97438 * 17 16 15 19 19 O 1.42908 * 109.46704 * 38.47651 * 18 17 16 20 20 Si 1.86298 * 109.47379 * 158.47209 * 18 17 16 21 21 N 1.31845 * 120.68188 * 179.70334 * 17 16 15 22 22 C 1.31843 * 121.78189 * 0.58235 * 21 17 16 23 23 C 1.50702 * 119.56124 * 179.68226 * 22 21 17 24 24 C 1.38255 * 120.88455 * 359.70554 * 22 21 17 25 25 C 1.38538 * 119.22088 * 0.02562 * 24 22 21 26 26 C 1.53784 * 113.61508 * 180.02562 * 6 4 3 27 27 H 1.08997 * 109.46919 * 59.99613 * 1 2 3 28 28 H 1.08994 * 109.47102 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.46878 * 300.00110 * 1 2 3 30 30 H 1.09003 * 109.47160 * 240.00579 * 2 1 3 31 31 H 1.08997 * 109.47439 * 120.00458 * 2 1 3 32 32 H 1.09000 * 113.61149 * 25.47896 * 8 6 4 33 33 H 1.08997 * 113.69783 * 254.49530 * 8 6 4 34 34 H 1.08999 * 109.47192 * 200.86627 * 11 9 8 35 35 H 1.09007 * 109.46710 * 320.86351 * 11 9 8 36 36 H 1.08993 * 109.47072 * 278.47652 * 18 17 16 37 37 H 0.96692 * 113.99916 * 65.84101 * 19 18 17 38 38 H 1.48505 * 109.99764 * 58.68391 * 20 18 17 39 39 H 1.48500 * 110.00464 * 180.02562 * 20 18 17 40 40 H 1.09000 * 109.47064 * 270.02338 * 23 22 21 41 41 H 1.08997 * 109.46895 * 30.02446 * 23 22 21 42 42 H 1.08998 * 109.46945 * 150.02265 * 23 22 21 43 43 H 1.07999 * 120.38912 * 180.02562 * 24 22 21 44 44 H 1.08000 * 120.81295 * 180.02562 * 25 24 22 45 45 H 1.08997 * 113.61411 * 105.46700 * 26 6 4 46 46 H 1.08999 * 113.68989 * 334.57310 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9374 0.0012 7 1 3.4714 3.5827 -0.7537 8 6 3.9860 3.5777 1.4007 9 6 5.3562 4.1422 0.9895 10 9 6.3099 4.0987 2.0121 11 6 5.2764 5.5103 0.3093 12 16 5.1145 6.8041 1.5704 13 8 3.8040 6.8036 2.1199 14 8 6.2608 6.8286 2.4097 15 8 5.1933 8.1079 0.7891 16 6 4.0688 8.3981 0.0830 17 6 3.0990 9.2337 0.6170 18 6 3.2956 9.8221 1.9904 19 8 4.6694 10.1747 2.1653 20 14 2.2361 11.3438 2.1715 21 7 2.0093 9.5226 -0.0667 22 6 1.7918 9.0265 -1.2687 23 6 0.5253 9.3846 -2.0027 24 6 2.7098 8.1818 -1.8646 25 6 3.8713 7.8564 -1.1832 26 6 5.4583 2.9680 0.0011 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 1.8933 -0.5138 -0.8901 31 1 1.8934 -0.5139 0.8899 32 1 4.0387 2.8509 2.2113 33 1 3.2299 4.3449 1.5672 34 1 6.1827 5.6806 -0.2718 35 1 4.4104 5.5372 -0.3522 36 1 3.0098 9.0886 2.7443 37 1 4.9689 10.8888 1.5863 38 1 0.8078 10.9963 1.9603 39 1 2.4213 11.9340 3.5216 40 1 -0.2527 8.6609 -1.7595 41 1 0.2010 10.3811 -1.7030 42 1 0.7115 9.3708 -3.0766 43 1 2.5236 7.7804 -2.8498 44 1 4.6060 7.1993 -1.6246 45 1 5.8895 3.2434 -0.9613 46 1 5.9141 2.0753 0.4292 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_3313794_15494190.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:22:26 Heat of formation + Delta-G solvation = -196.052583 kcal Electronic energy + Delta-G solvation = -36380.676384 eV Core-core repulsion = 31281.188218 eV Total energy + Delta-G solvation = -5099.488165 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.112 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -49.14660 -42.71846 -41.96524 -40.34252 -39.65072 -38.53580 -38.01560 -37.66115 -37.41235 -33.95060 -33.54675 -32.79190 -31.61248 -29.06614 -27.48493 -27.35503 -27.19077 -24.31223 -23.92474 -23.50125 -22.44957 -21.94170 -20.58553 -19.91107 -19.37685 -18.94194 -18.85290 -18.30113 -18.15068 -17.80082 -17.47465 -17.08178 -16.86644 -16.59801 -16.52328 -16.21127 -16.08481 -15.53733 -15.31714 -15.21954 -14.93877 -14.88012 -14.52639 -14.37495 -14.23446 -14.16028 -14.08971 -13.75505 -13.72505 -13.62330 -13.53088 -13.44127 -13.14359 -13.09735 -13.02246 -12.94524 -12.80855 -12.55399 -12.51944 -12.45232 -12.14714 -12.05077 -11.61681 -11.57735 -11.51925 -11.23064 -11.00146 -10.50118 -9.91954 -5.01926 -1.36554 -0.29582 -0.11842 0.84497 0.93524 1.20655 1.49784 1.71517 1.97274 2.24992 2.34557 2.52420 2.68664 2.75236 2.78590 2.87480 3.07911 3.16408 3.23678 3.50947 3.54537 3.60712 3.70666 3.76676 3.84351 3.93602 3.98836 3.99834 4.16914 4.24671 4.28542 4.34235 4.37839 4.40218 4.46344 4.50919 4.64736 4.68768 4.78076 4.79275 4.84896 4.86528 4.94891 4.98834 5.09568 5.20089 5.36505 5.50880 6.52709 6.54849 6.68826 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.357 6.357 4 C 0.473 3.527 5 O -0.534 6.534 6 C -0.096 4.096 7 H 0.178 0.822 8 C -0.161 4.161 9 C 0.088 3.912 10 F -0.203 7.203 11 C -0.654 4.654 12 S 2.586 3.414 13 O -0.971 6.971 14 O -0.958 6.958 15 O -0.639 6.639 16 C 0.002 3.998 17 C 0.121 3.879 18 C -0.106 4.106 19 O -0.547 6.547 20 Si 0.820 3.180 21 N -0.483 5.483 22 C 0.145 3.855 23 C -0.112 4.112 24 C -0.133 4.133 25 C -0.085 4.085 26 C -0.116 4.116 27 H 0.073 0.927 28 H 0.095 0.905 29 H 0.066 0.934 30 H 0.073 0.927 31 H 0.064 0.936 32 H 0.104 0.896 33 H 0.116 0.884 34 H 0.197 0.803 35 H 0.198 0.802 36 H 0.114 0.886 37 H 0.397 0.603 38 H -0.278 1.278 39 H -0.296 1.296 40 H 0.093 0.907 41 H 0.076 0.924 42 H 0.112 0.888 43 H 0.200 0.800 44 H 0.199 0.801 45 H 0.135 0.865 46 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.474 1.229 -13.467 14.589 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.273 6.273 4 C 0.317 3.683 5 O -0.423 6.423 6 C -0.114 4.114 7 H 0.196 0.804 8 C -0.199 4.199 9 C 0.068 3.932 10 F -0.184 7.184 11 C -0.781 4.781 12 S 2.685 3.315 13 O -0.970 6.970 14 O -0.956 6.956 15 O -0.597 6.597 16 C -0.042 4.042 17 C -0.019 4.019 18 C -0.214 4.214 19 O -0.353 6.353 20 Si 0.723 3.277 21 N -0.197 5.197 22 C 0.007 3.993 23 C -0.169 4.169 24 C -0.152 4.152 25 C -0.112 4.112 26 C -0.154 4.154 27 H 0.092 0.908 28 H 0.114 0.886 29 H 0.085 0.915 30 H 0.091 0.909 31 H 0.083 0.917 32 H 0.122 0.878 33 H 0.134 0.866 34 H 0.215 0.785 35 H 0.216 0.784 36 H 0.131 0.869 37 H 0.247 0.753 38 H -0.205 1.205 39 H -0.225 1.225 40 H 0.111 0.889 41 H 0.095 0.905 42 H 0.131 0.869 43 H 0.217 0.783 44 H 0.216 0.784 45 H 0.153 0.847 46 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -6.373 1.795 -11.510 13.279 hybrid contribution 1.276 -1.981 0.331 2.380 sum -5.097 -0.186 -11.179 12.287 Atomic orbital electron populations 1.21831 0.90677 1.04277 1.03819 1.23285 0.96940 0.79190 1.02617 1.86516 1.23930 1.33604 1.83278 1.23715 0.80741 0.92560 0.71319 1.90697 1.61172 1.44070 1.46393 1.22521 0.97124 0.90950 1.00843 0.80436 1.24002 0.96109 1.02287 0.97479 1.21903 0.88488 0.94891 0.87908 1.92977 1.66668 1.97381 1.61335 1.31272 1.18052 1.09552 1.19248 1.05644 0.73814 0.75524 0.76556 1.93596 1.40879 1.85089 1.77393 1.93623 1.52737 1.85094 1.64195 1.85767 1.45447 1.59225 1.69235 1.19064 0.85223 1.05664 0.94298 1.21892 0.89326 0.93863 0.96827 1.25543 0.91888 1.10528 0.93470 1.86531 1.23900 1.59801 1.65098 0.93126 0.76270 0.78049 0.80256 1.67159 1.18753 1.24720 1.09115 1.22194 0.97529 0.90644 0.88975 1.20990 0.91680 1.03594 1.00670 1.22477 0.91887 0.97554 1.03320 1.22507 0.99540 0.98765 0.90348 1.23620 0.93783 0.96514 1.01485 0.90819 0.88630 0.91521 0.90871 0.91705 0.87792 0.86552 0.78510 0.78427 0.86910 0.75268 1.20451 1.22472 0.88883 0.90460 0.86917 0.78259 0.78436 0.84696 0.88105 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.73 10.29 71.98 0.74 1.47 16 2 C 0.05 -0.03 6.19 71.98 0.45 0.41 16 3 O -0.36 -0.38 10.22 -51.43 -0.53 -0.91 16 4 C 0.47 0.76 7.49 71.24 0.53 1.30 16 5 O -0.53 -4.46 15.65 21.98 0.34 -4.11 16 6 C -0.10 0.55 3.91 -10.92 -0.04 0.51 16 7 H 0.18 -2.63 7.64 -2.39 -0.02 -2.65 16 8 C -0.16 0.27 7.11 31.21 0.22 0.49 16 9 C 0.09 -0.10 1.76 -10.25 -0.02 -0.12 16 10 F -0.20 -1.65 16.14 44.97 0.73 -0.92 16 11 C -0.65 4.63 4.66 71.98 0.34 4.97 16 12 S 2.59 15.43 5.00 -56.49 -0.28 15.15 16 13 O -0.97 -9.58 14.86 -118.57 -1.76 -11.34 16 14 O -0.96 -15.68 17.26 -118.57 -2.05 -17.73 16 15 O -0.64 -2.27 8.16 -58.73 -0.48 -2.75 16 16 C 0.00 0.00 4.59 22.60 0.10 0.10 16 17 C 0.12 0.42 5.73 42.67 0.24 0.66 16 18 C -0.11 -0.70 2.44 71.24 0.17 -0.52 16 19 O -0.55 -3.57 11.14 -128.59 -1.43 -5.00 16 20 Si 0.82 2.46 31.65 68.60 2.17 4.63 16 21 N -0.48 -0.56 8.04 -171.70 -1.38 -1.94 16 22 C 0.14 -0.88 6.78 42.56 0.29 -0.59 16 23 C -0.11 1.23 10.17 71.24 0.72 1.96 16 24 C -0.13 1.62 9.73 22.35 0.22 1.84 16 25 C -0.08 0.86 8.55 22.56 0.19 1.05 16 26 C -0.12 0.56 6.89 31.14 0.21 0.77 16 27 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 28 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 29 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 30 H 0.07 -0.07 8.13 -2.39 -0.02 -0.09 16 31 H 0.06 0.04 8.13 -2.39 -0.02 0.02 16 32 H 0.10 0.07 8.10 -2.39 -0.02 0.05 16 33 H 0.12 -0.37 7.53 -2.39 -0.02 -0.39 16 34 H 0.20 -2.81 8.14 -2.39 -0.02 -2.83 16 35 H 0.20 -3.29 5.74 -2.39 -0.01 -3.30 16 36 H 0.11 1.24 7.17 -2.39 -0.02 1.22 16 37 H 0.40 -1.15 8.59 -74.06 -0.64 -1.79 16 38 H -0.28 -2.21 7.11 99.48 0.71 -1.51 16 39 H -0.30 -2.63 7.11 99.48 0.71 -1.93 16 40 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 41 H 0.08 -0.66 8.14 -2.39 -0.02 -0.68 16 42 H 0.11 -1.86 8.08 -2.39 -0.02 -1.88 16 43 H 0.20 -4.19 8.06 -2.91 -0.02 -4.21 16 44 H 0.20 -3.89 7.04 -2.91 -0.02 -3.91 16 45 H 0.13 -1.60 8.10 -2.39 -0.02 -1.62 16 46 H 0.10 0.01 7.44 -2.39 -0.02 -0.01 16 Total: 0.00 -38.82 397.22 0.14 -38.68 By element: Atomic # 1 Polarization: -28.48 SS G_CDS: 0.44 Total: -28.05 kcal Atomic # 6 Polarization: 9.92 SS G_CDS: 4.38 Total: 14.30 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -1.38 Total: -1.94 kcal Atomic # 8 Polarization: -35.94 SS G_CDS: -5.90 Total: -41.84 kcal Atomic # 9 Polarization: -1.65 SS G_CDS: 0.73 Total: -0.92 kcal Atomic # 14 Polarization: 2.46 SS G_CDS: 2.17 Total: 4.63 kcal Atomic # 16 Polarization: 15.43 SS G_CDS: -0.28 Total: 15.15 kcal Total: -38.82 0.14 -38.68 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_3313794_15494190.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -157.375 kcal (2) G-P(sol) polarization free energy of solvation -38.821 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -196.196 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.143 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.678 kcal (6) G-S(sol) free energy of system = (1) + (5) -196.053 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds