Wall clock time and date at job start Mon Mar 8 2021 12:41:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45196 * 109.47232 * 2 1 4 4 C 1.34234 * 117.00416 * 179.97438 * 3 2 1 5 5 O 1.20830 * 119.99291 * 0.02562 * 4 3 2 6 6 C 1.50698 * 120.00484 * 179.72432 * 4 3 2 7 7 H 1.08994 * 112.84634 * 49.07749 * 6 4 3 8 8 C 1.53772 * 113.61617 * 180.27819 * 6 4 3 9 9 C 1.53780 * 87.08427 * 139.98083 * 8 6 4 10 10 F 1.39899 * 113.61500 * 89.11425 * 9 8 6 11 11 C 1.52997 * 113.61705 * 220.02246 * 9 8 6 12 12 S 1.81404 * 109.47110 * 179.97438 * 11 9 8 13 13 O 1.42105 * 110.54161 * 291.62105 * 12 11 9 14 14 O 1.42096 * 110.54378 * 68.37186 * 12 11 9 15 15 O 1.52201 * 104.44967 * 179.97438 * 12 11 9 16 16 C 1.35909 * 113.99969 * 74.99995 * 15 12 11 17 17 C 1.38710 * 120.47663 * 90.00005 * 16 15 12 18 18 C 1.50704 * 119.65615 * 359.97438 * 17 16 15 19 19 O 1.42894 * 109.46915 * 113.48426 * 18 17 16 20 20 Si 1.86303 * 109.46913 * 233.48541 * 18 17 16 21 21 N 1.31838 * 120.68489 * 180.02562 * 17 16 15 22 22 C 1.31848 * 121.77971 * 359.97438 * 21 17 16 23 23 C 1.50708 * 119.55434 * 180.02562 * 22 21 17 24 24 C 1.38253 * 120.88914 * 359.97438 * 22 21 17 25 25 C 1.38537 * 119.21777 * 359.76819 * 24 22 21 26 26 C 1.53785 * 113.61144 * 277.77669 * 6 4 3 27 27 H 1.08997 * 109.46818 * 59.99972 * 1 2 3 28 28 H 1.09003 * 109.46938 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.46883 * 300.00007 * 1 2 3 30 30 H 1.09003 * 109.47568 * 239.99888 * 2 1 3 31 31 H 1.09003 * 109.47488 * 120.00106 * 2 1 3 32 32 H 1.08998 * 113.61514 * 254.52853 * 8 6 4 33 33 H 1.08997 * 113.61519 * 25.34993 * 8 6 4 34 34 H 1.09004 * 109.46948 * 299.99112 * 11 9 8 35 35 H 1.08996 * 109.47544 * 60.00134 * 11 9 8 36 36 H 1.09001 * 109.46732 * 353.48028 * 18 17 16 37 37 H 0.96696 * 114.00080 * 304.65404 * 19 18 17 38 38 H 1.48500 * 109.99874 * 298.68111 * 20 18 17 39 39 H 1.48502 * 109.99863 * 60.00225 * 20 18 17 40 40 H 1.08998 * 109.46732 * 90.00256 * 23 22 21 41 41 H 1.08995 * 109.46964 * 209.99733 * 23 22 21 42 42 H 1.08996 * 109.46984 * 330.00097 * 23 22 21 43 43 H 1.07997 * 120.39119 * 180.02562 * 24 22 21 44 44 H 1.08004 * 120.80820 * 180.25366 * 25 24 22 45 45 H 1.08995 * 113.61826 * 334.56683 * 26 6 4 46 46 H 1.09001 * 113.60993 * 105.47043 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9374 -0.0057 7 1 3.4738 3.5836 0.7496 8 6 5.4582 2.9680 -0.0111 9 6 5.3531 4.1394 -1.0019 10 9 5.2820 5.3921 -0.3832 11 6 6.3914 4.0876 -2.1245 12 16 6.1662 5.5139 -3.2226 13 8 4.9461 5.4013 -3.9424 14 8 6.5135 6.7183 -2.5533 15 8 7.2451 5.3503 -4.2837 16 6 6.9773 4.3825 -5.1996 17 6 6.2839 4.6863 -6.3619 18 6 5.8247 6.1004 -6.6082 19 8 6.5309 6.6426 -7.7258 20 14 3.9965 6.1060 -6.9666 21 7 6.0215 3.7507 -7.2528 22 6 6.4029 2.5005 -7.0797 23 6 6.0766 1.4714 -8.1313 24 6 7.0991 2.1211 -5.9471 25 6 7.4005 3.0741 -4.9877 26 6 3.9815 3.5726 -1.4049 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 1.8934 -0.5138 -0.8900 31 1 1.8934 -0.5139 0.8900 32 1 5.8927 3.2460 0.9491 33 1 5.9113 2.0731 -0.4375 34 1 7.3928 4.1141 -1.6947 35 1 6.2648 3.1673 -2.6945 36 1 6.0235 6.7061 -5.7240 37 1 7.4932 6.6053 -7.6387 38 1 3.7160 5.3096 -8.1882 39 1 3.2508 5.5444 -5.8117 40 1 6.8855 1.4281 -8.8606 41 1 5.9595 0.4954 -7.6604 42 1 5.1490 1.7464 -8.6332 43 1 7.4080 1.0949 -5.8137 44 1 7.9467 2.8069 -4.0951 45 1 4.0308 2.8435 -2.2137 46 1 3.2239 4.3387 -1.5699 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_3313794_16464788.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:41:19 Heat of formation + Delta-G solvation = -190.968692 kcal Electronic energy + Delta-G solvation = -36343.466189 eV Core-core repulsion = 31244.198478 eV Total energy + Delta-G solvation = -5099.267711 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.112 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -49.30963 -42.95969 -41.89962 -40.56971 -39.50183 -38.49361 -37.86975 -37.55034 -37.36717 -34.04936 -33.86667 -32.95099 -32.16055 -29.44047 -27.62124 -27.48195 -27.07589 -24.49981 -24.00493 -23.60888 -22.48254 -21.93469 -21.04169 -19.96401 -19.49016 -19.23344 -18.90003 -18.45387 -17.92538 -17.73168 -17.71114 -17.30514 -16.80846 -16.71999 -16.45317 -16.34364 -16.15005 -15.67859 -15.54558 -15.20533 -15.17747 -14.79660 -14.77827 -14.51808 -14.46556 -14.19691 -13.97497 -13.87586 -13.86646 -13.65315 -13.46349 -13.41850 -13.39380 -13.28908 -13.23192 -13.09472 -13.07073 -12.69158 -12.61273 -12.07113 -12.06322 -11.76181 -11.64094 -11.60870 -11.50064 -11.44920 -11.12200 -10.77974 -10.24058 -4.69019 -1.44725 -0.53283 -0.38677 0.66887 0.95995 1.44409 1.47028 1.95936 2.13513 2.17521 2.27968 2.39783 2.51026 2.56315 2.61887 2.71420 2.97058 3.01175 3.04776 3.18048 3.30424 3.44057 3.52685 3.65320 3.75119 3.80290 3.85589 3.89246 3.95137 4.05687 4.09296 4.11867 4.16621 4.18980 4.19888 4.28135 4.39811 4.41163 4.43625 4.47467 4.61193 4.61758 4.71707 4.79340 4.81784 4.93662 5.14859 5.31740 6.40644 6.47882 6.56810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.109 4.109 7 H 0.139 0.861 8 C -0.121 4.121 9 C 0.103 3.897 10 F -0.169 7.169 11 C -0.673 4.673 12 S 2.582 3.418 13 O -0.933 6.933 14 O -0.899 6.899 15 O -0.652 6.652 16 C 0.008 3.992 17 C 0.141 3.859 18 C -0.075 4.075 19 O -0.519 6.519 20 Si 0.765 3.235 21 N -0.443 5.443 22 C 0.153 3.847 23 C -0.112 4.112 24 C -0.151 4.151 25 C -0.081 4.081 26 C -0.143 4.143 27 H 0.068 0.932 28 H 0.082 0.918 29 H 0.068 0.932 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.103 0.897 33 H 0.121 0.879 34 H 0.158 0.842 35 H 0.152 0.848 36 H 0.070 0.930 37 H 0.365 0.635 38 H -0.244 1.244 39 H -0.223 1.223 40 H 0.090 0.910 41 H 0.084 0.916 42 H 0.086 0.914 43 H 0.157 0.843 44 H 0.157 0.843 45 H 0.113 0.887 46 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.409 -5.481 0.162 5.499 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.013 4.013 3 O -0.269 6.269 4 C 0.318 3.682 5 O -0.391 6.391 6 C -0.128 4.128 7 H 0.157 0.843 8 C -0.159 4.159 9 C 0.084 3.916 10 F -0.149 7.149 11 C -0.798 4.798 12 S 2.675 3.325 13 O -0.931 6.931 14 O -0.897 6.897 15 O -0.610 6.610 16 C -0.036 4.036 17 C 0.001 3.999 18 C -0.183 4.183 19 O -0.323 6.323 20 Si 0.659 3.341 21 N -0.156 5.156 22 C 0.014 3.986 23 C -0.169 4.169 24 C -0.171 4.171 25 C -0.108 4.108 26 C -0.181 4.181 27 H 0.087 0.913 28 H 0.101 0.899 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.091 0.909 32 H 0.121 0.879 33 H 0.139 0.861 34 H 0.176 0.824 35 H 0.171 0.829 36 H 0.088 0.912 37 H 0.212 0.788 38 H -0.169 1.169 39 H -0.147 1.147 40 H 0.109 0.891 41 H 0.103 0.897 42 H 0.105 0.895 43 H 0.175 0.825 44 H 0.175 0.825 45 H 0.132 0.868 46 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -2.038 -5.177 -1.095 5.670 hybrid contribution 2.600 -1.648 2.048 3.697 sum 0.562 -6.825 0.954 6.914 Atomic orbital electron populations 1.21831 0.92137 1.03368 1.03819 1.23132 0.95792 0.79554 1.02809 1.86524 1.23960 1.33017 1.83439 1.23204 0.80929 0.91783 0.72279 1.90687 1.60565 1.42714 1.45118 1.22477 0.97143 0.92189 1.00999 0.84279 1.23583 0.93874 0.97663 1.00798 1.21156 0.95393 0.82239 0.92860 1.93023 1.97001 1.41221 1.83658 1.31332 1.09830 1.24668 1.13923 1.06274 0.74165 0.76749 0.75329 1.93698 1.45554 1.86812 1.67073 1.93708 1.82014 1.39690 1.74267 1.85776 1.67734 1.58834 1.48614 1.18837 1.06113 0.86350 0.92318 1.21996 0.91452 0.97951 0.88538 1.25533 1.12693 0.86649 0.93381 1.86816 1.22519 1.82479 1.40498 0.93732 0.70805 0.88114 0.81409 1.67540 1.18906 1.00648 1.28545 1.21761 0.90954 0.91623 0.94270 1.20877 1.04125 0.95335 0.96528 1.22056 0.99859 1.01310 0.93878 1.21903 0.97005 0.90525 1.01353 1.23774 0.96055 1.01833 0.96434 0.91262 0.89896 0.91249 0.91045 0.90945 0.87860 0.86108 0.82404 0.82943 0.91242 0.78753 1.16855 1.14698 0.89122 0.89682 0.89532 0.82496 0.82542 0.86831 0.86992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.32 10.29 37.16 0.38 0.71 16 2 C 0.06 -0.03 6.19 37.16 0.23 0.20 16 3 O -0.35 -0.34 10.22 -39.27 -0.40 -0.74 16 4 C 0.48 0.46 7.48 36.00 0.27 0.73 16 5 O -0.50 -1.61 15.65 -18.75 -0.29 -1.90 16 6 C -0.11 0.14 4.24 -90.96 -0.39 -0.25 16 7 H 0.14 -0.36 8.14 -51.93 -0.42 -0.79 16 8 C -0.12 0.23 6.86 -25.92 -0.18 0.05 16 9 C 0.10 -0.09 1.62 -89.81 -0.15 -0.23 16 10 F -0.17 -0.27 16.28 2.25 0.04 -0.24 16 11 C -0.67 1.46 5.24 37.16 0.19 1.66 16 12 S 2.58 4.72 4.48 -107.50 -0.48 4.24 16 13 O -0.93 -2.88 13.17 -67.03 -0.88 -3.77 16 14 O -0.90 -4.74 17.54 -67.04 -1.18 -5.92 16 15 O -0.65 -0.97 9.06 -51.78 -0.47 -1.43 16 16 C 0.01 0.01 4.78 -39.07 -0.19 -0.18 16 17 C 0.14 0.44 4.73 -82.41 -0.39 0.05 16 18 C -0.08 -0.25 2.24 36.01 0.08 -0.17 16 19 O -0.52 -1.48 12.68 -35.23 -0.45 -1.93 16 20 Si 0.77 2.29 31.21 -169.99 -5.31 -3.01 16 21 N -0.44 -1.35 9.16 -5.62 -0.05 -1.40 16 22 C 0.15 -0.01 6.78 -82.58 -0.56 -0.57 16 23 C -0.11 0.29 10.17 36.01 0.37 0.65 16 24 C -0.15 0.35 9.74 -39.47 -0.38 -0.03 16 25 C -0.08 0.15 8.62 -39.14 -0.34 -0.19 16 26 C -0.14 0.20 7.07 -25.91 -0.18 0.01 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 28 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 29 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 32 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 33 H 0.12 -0.29 7.39 -51.93 -0.38 -0.67 16 34 H 0.16 -0.73 8.14 -51.92 -0.42 -1.15 16 35 H 0.15 -0.75 6.45 -51.93 -0.33 -1.08 16 36 H 0.07 0.19 5.95 -51.93 -0.31 -0.12 16 37 H 0.37 -0.05 9.03 45.56 0.41 0.36 16 38 H -0.24 -1.24 7.11 56.52 0.40 -0.83 16 39 H -0.22 -1.01 6.65 56.52 0.38 -0.63 16 40 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 41 H 0.08 -0.40 8.08 -51.93 -0.42 -0.82 16 42 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.16 -0.89 8.06 -52.49 -0.42 -1.31 16 44 H 0.16 -0.86 7.60 -52.48 -0.40 -1.26 16 45 H 0.11 -0.28 7.91 -51.93 -0.41 -0.69 16 46 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 LS Contribution 399.26 15.07 6.02 6.02 Total: 0.00 -11.16 399.26 -10.82 -21.99 By element: Atomic # 1 Polarization: -8.21 SS G_CDS: -6.14 Total: -14.35 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: -1.23 Total: 2.45 kcal Atomic # 7 Polarization: -1.35 SS G_CDS: -0.05 Total: -1.40 kcal Atomic # 8 Polarization: -12.02 SS G_CDS: -3.67 Total: -15.69 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.04 Total: -0.24 kcal Atomic # 14 Polarization: 2.29 SS G_CDS: -5.31 Total: -3.01 kcal Atomic # 16 Polarization: 4.72 SS G_CDS: -0.48 Total: 4.24 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -11.16 -10.82 -21.99 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_3313794_16464788.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.984 kcal (2) G-P(sol) polarization free energy of solvation -11.162 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.823 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.985 kcal (6) G-S(sol) free energy of system = (1) + (5) -190.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds