Wall clock time and date at job start Mon Mar 8 2021 10:50:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 O 1.45197 * 109.46589 * 2 1 4 4 C 1.34236 * 116.99845 * 179.97438 * 3 2 1 5 5 O 1.20819 * 119.99832 * 359.97438 * 4 3 2 6 6 C 1.50705 * 120.00068 * 179.97438 * 4 3 2 7 7 H 1.08993 * 112.90749 * 311.25111 * 6 4 3 8 8 C 1.53779 * 113.61121 * 82.50359 * 6 4 3 9 9 C 1.53776 * 87.08085 * 139.97874 * 8 6 4 10 10 F 1.39910 * 113.61144 * 89.11392 * 9 8 6 11 11 C 1.52996 * 113.61657 * 220.01697 * 9 8 6 12 12 S 1.81404 * 109.47106 * 282.49705 * 11 9 8 13 13 O 1.42102 * 110.54454 * 291.62269 * 12 11 9 14 14 O 1.42100 * 110.54347 * 68.37541 * 12 11 9 15 15 O 1.52201 * 104.45015 * 180.02562 * 12 11 9 16 16 C 1.35913 * 114.00248 * 74.99856 * 15 12 11 17 17 C 1.38702 * 120.04487 * 89.99935 * 16 15 12 18 18 C 1.38160 * 119.95772 * 180.02562 * 17 16 15 19 19 C 1.50693 * 119.98286 * 179.97438 * 18 17 16 20 20 O 1.42899 * 109.47081 * 15.73270 * 19 18 17 21 21 Si 1.86300 * 109.47074 * 255.73638 * 19 18 17 22 22 C 1.38332 * 120.04323 * 0.02562 * 18 17 16 23 23 Br 1.89094 * 119.95315 * 180.02562 * 22 18 17 24 24 C 1.38360 * 120.08908 * 359.97438 * 22 18 17 25 25 C 1.38126 * 120.04941 * 359.73084 * 24 22 18 26 26 C 1.53775 * 87.08224 * 334.56907 * 9 8 6 27 27 H 1.09003 * 109.46596 * 60.00382 * 1 2 3 28 28 H 1.09001 * 109.46430 * 179.97438 * 1 2 3 29 29 H 1.08989 * 109.47152 * 299.99958 * 1 2 3 30 30 H 1.08993 * 109.47639 * 240.00096 * 2 1 3 31 31 H 1.08993 * 109.46715 * 119.99501 * 2 1 3 32 32 H 1.09006 * 113.61516 * 25.43053 * 8 6 4 33 33 H 1.09000 * 113.61251 * 254.52873 * 8 6 4 34 34 H 1.08996 * 109.47093 * 42.49450 * 11 9 8 35 35 H 1.09002 * 109.47467 * 162.50041 * 11 9 8 36 36 H 1.08005 * 120.02356 * 359.97438 * 17 16 15 37 37 H 1.09003 * 109.47450 * 135.73349 * 19 18 17 38 38 H 0.96702 * 114.00467 * 180.02562 * 20 19 18 39 39 H 1.48502 * 110.00175 * 65.14212 * 21 19 18 40 40 H 1.48508 * 110.00149 * 186.46026 * 21 19 18 41 41 H 1.08001 * 119.97601 * 179.97438 * 24 22 18 42 42 H 1.07996 * 120.02775 * 180.27689 * 25 24 22 43 43 H 1.08996 * 113.61943 * 139.98557 * 26 9 8 44 44 H 1.09007 * 113.61415 * 270.88423 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5868 0.0015 6 6 3.9207 2.9376 0.0000 7 1 3.4714 3.5822 -0.7554 8 6 3.9855 3.5779 1.3967 9 6 5.3558 4.1432 0.9876 10 9 5.2828 5.3937 0.3645 11 6 6.3975 4.0956 2.1073 12 16 6.0841 5.4417 3.2822 13 8 6.3529 6.7010 2.6812 14 8 4.8751 5.2122 3.9927 15 8 7.1732 5.2887 4.3344 16 6 8.4014 5.7003 3.9228 17 6 8.7937 7.0165 4.1167 18 6 10.0423 7.4332 3.6971 19 6 10.4690 8.8631 3.9070 20 8 9.6018 9.4842 4.8580 21 14 10.3767 9.7826 2.2894 22 6 10.9009 6.5388 3.0834 23 35 12.6095 7.1117 2.5108 24 6 10.5114 5.2255 2.8890 25 6 9.2663 4.8034 3.3125 26 6 5.4581 2.9684 0.0007 27 1 -0.3632 0.5138 -0.8901 28 1 -0.3632 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8899 30 1 1.8935 -0.5138 -0.8899 31 1 1.8933 -0.5137 0.8900 32 1 4.0373 2.8517 2.2079 33 1 3.2283 4.3445 1.5611 34 1 6.3310 3.1387 2.6249 35 1 7.3943 4.2099 1.6813 36 1 8.1232 7.7154 4.5947 37 1 11.4930 8.8859 4.2800 38 1 9.8176 10.4087 5.0422 39 1 8.9662 9.8661 1.8323 40 1 10.9408 11.1472 2.4478 41 1 11.1830 4.5289 2.4093 42 1 8.9644 3.7771 3.1646 43 1 5.8899 3.2428 -0.9617 44 1 5.9125 2.0755 0.4304 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_7425988_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:50:40 Heat of formation + Delta-G solvation = -199.205274 kcal Electronic energy + Delta-G solvation = -35184.817473 eV Core-core repulsion = 29966.338124 eV Total energy + Delta-G solvation = -5218.479349 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -49.20464 -42.44164 -41.86553 -39.97711 -39.36363 -38.57133 -37.83428 -37.56178 -37.45220 -33.57051 -32.95863 -32.78290 -31.96000 -30.30217 -27.38761 -27.28181 -26.86713 -24.68165 -24.00087 -23.31074 -22.25908 -21.46984 -20.86878 -19.67182 -19.30123 -18.97108 -18.87332 -18.43117 -17.81784 -17.67221 -17.45977 -17.26685 -16.94553 -16.46303 -16.45227 -16.21410 -16.18265 -15.73031 -15.42320 -15.08066 -14.71824 -14.67225 -14.62603 -14.52284 -14.25976 -14.16574 -13.82593 -13.70233 -13.66878 -13.55429 -13.45940 -13.40097 -13.10140 -12.97431 -12.93231 -12.90154 -12.66185 -12.53924 -12.45995 -12.17088 -12.00266 -11.89774 -11.58330 -11.51205 -11.41602 -11.33389 -11.17957 -10.05935 -9.79856 -5.08066 -1.39670 -0.42766 -0.12529 0.33227 0.77750 0.97756 1.10088 1.45390 1.55098 1.85337 2.11912 2.26243 2.62336 2.63425 2.74981 2.86910 2.90309 3.15287 3.18753 3.28869 3.43216 3.62100 3.77533 3.82338 3.88774 3.96580 3.98338 4.02094 4.08467 4.16459 4.30987 4.31818 4.34409 4.39462 4.42895 4.61596 4.63159 4.75631 4.77124 4.80254 4.80581 4.88127 4.93056 5.02412 5.11530 5.38350 5.39411 6.44108 6.58527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.054 3.946 3 O -0.362 6.362 4 C 0.477 3.523 5 O -0.527 6.527 6 C -0.110 4.110 7 H 0.148 0.852 8 C -0.157 4.157 9 C 0.093 3.907 10 F -0.186 7.186 11 C -0.651 4.651 12 S 2.580 3.420 13 O -0.969 6.969 14 O -0.952 6.952 15 O -0.663 6.663 16 C 0.057 3.943 17 C -0.096 4.096 18 C -0.044 4.044 19 C -0.080 4.080 20 O -0.553 6.553 21 Si 0.718 3.282 22 C -0.083 4.083 23 Br 0.008 6.992 24 C -0.054 4.054 25 C -0.120 4.120 26 C -0.108 4.108 27 H 0.067 0.933 28 H 0.097 0.903 29 H 0.067 0.933 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.129 0.871 33 H 0.104 0.896 34 H 0.202 0.798 35 H 0.187 0.813 36 H 0.131 0.869 37 H 0.115 0.885 38 H 0.403 0.597 39 H -0.299 1.299 40 H -0.251 1.251 41 H 0.195 0.805 42 H 0.196 0.804 43 H 0.114 0.886 44 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.647 -4.938 -3.239 8.171 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.020 4.020 3 O -0.279 6.279 4 C 0.321 3.679 5 O -0.416 6.416 6 C -0.129 4.129 7 H 0.166 0.834 8 C -0.195 4.195 9 C 0.073 3.927 10 F -0.167 7.167 11 C -0.780 4.780 12 S 2.680 3.320 13 O -0.968 6.968 14 O -0.950 6.950 15 O -0.622 6.622 16 C 0.015 3.985 17 C -0.118 4.118 18 C -0.047 4.047 19 C -0.188 4.188 20 O -0.363 6.363 21 Si 0.619 3.381 22 C -0.163 4.163 23 Br 0.094 6.906 24 C -0.073 4.073 25 C -0.141 4.141 26 C -0.146 4.146 27 H 0.086 0.914 28 H 0.116 0.884 29 H 0.086 0.914 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.147 0.853 33 H 0.123 0.877 34 H 0.220 0.780 35 H 0.205 0.795 36 H 0.149 0.851 37 H 0.133 0.867 38 H 0.254 0.746 39 H -0.227 1.227 40 H -0.175 1.175 41 H 0.212 0.788 42 H 0.213 0.787 43 H 0.133 0.867 44 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 5.519 -4.373 -3.343 7.795 hybrid contribution -1.174 0.531 1.080 1.681 sum 4.345 -3.842 -2.263 6.226 Atomic orbital electron populations 1.21842 0.91011 1.04286 1.03639 1.23288 0.96762 0.79100 1.02811 1.86535 1.24275 1.33783 1.83291 1.23607 0.80658 0.92326 0.71332 1.90666 1.60919 1.43666 1.46387 1.22591 0.98140 0.90898 1.01247 0.83407 1.23962 0.96211 1.02190 0.97139 1.21376 0.95732 0.81971 0.93639 1.92995 1.97088 1.42759 1.83827 1.31251 1.11118 1.22823 1.12818 1.05749 0.74094 0.77009 0.75163 1.93662 1.83338 1.41018 1.78761 1.93622 1.43716 1.87037 1.70642 1.85735 1.29309 1.85666 1.61507 1.18479 0.82708 0.94085 1.03190 1.21066 0.96936 0.94840 0.98923 1.19154 0.92910 0.94959 0.97657 1.24977 0.97010 0.93683 1.03178 1.86464 1.57210 1.31760 1.60895 0.94167 0.82158 0.82015 0.79778 1.21905 0.93909 0.96552 1.03961 1.96799 1.16690 1.89137 1.87986 1.21484 0.95664 0.93589 0.96572 1.21875 0.93376 1.01310 0.97492 1.23600 0.92898 0.97113 1.01037 0.91378 0.88440 0.91425 0.91028 0.90986 0.85316 0.87710 0.78045 0.79541 0.85111 0.86719 0.74569 1.22662 1.17518 0.78820 0.78653 0.86708 0.84828 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.56 10.29 71.98 0.74 1.31 16 2 C 0.05 -0.01 6.19 71.98 0.45 0.44 16 3 O -0.36 -0.97 10.22 -51.48 -0.53 -1.50 16 4 C 0.48 0.99 7.48 71.24 0.53 1.52 16 5 O -0.53 -3.33 15.65 21.98 0.34 -2.98 16 6 C -0.11 0.31 4.24 -11.01 -0.05 0.26 16 7 H 0.15 -0.76 8.14 -2.39 -0.02 -0.78 16 8 C -0.16 0.35 6.90 31.12 0.21 0.57 16 9 C 0.09 -0.25 1.57 -10.27 -0.02 -0.26 16 10 F -0.19 -0.64 16.51 44.97 0.74 0.10 16 11 C -0.65 4.20 5.13 71.98 0.37 4.57 16 12 S 2.58 14.03 4.92 -56.49 -0.28 13.75 16 13 O -0.97 -12.07 15.81 -118.57 -1.88 -13.95 16 14 O -0.95 -11.08 17.96 -118.57 -2.13 -13.21 16 15 O -0.66 -3.04 10.05 -61.66 -0.62 -3.66 16 16 C 0.06 0.16 4.79 22.50 0.11 0.27 16 17 C -0.10 -0.68 8.36 22.36 0.19 -0.50 16 18 C -0.04 -0.12 4.51 -19.86 -0.09 -0.21 16 19 C -0.08 -0.08 2.43 71.23 0.17 0.09 16 20 O -0.55 -1.76 11.50 -148.98 -1.71 -3.47 16 21 Si 0.72 1.32 30.92 68.60 2.12 3.44 16 22 C -0.08 0.24 5.95 22.32 0.13 0.37 16 23 Br 0.01 -0.04 30.31 -20.37 -0.62 -0.66 16 24 C -0.05 0.42 9.78 22.27 0.22 0.63 16 25 C -0.12 0.77 8.46 22.37 0.19 0.96 16 26 C -0.11 0.64 6.86 31.12 0.21 0.85 16 27 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 28 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 29 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 30 H 0.07 -0.02 8.13 -2.39 -0.02 -0.04 16 31 H 0.07 -0.03 8.13 -2.39 -0.02 -0.05 16 32 H 0.13 -0.62 7.99 -2.38 -0.02 -0.64 16 33 H 0.10 -0.14 8.14 -2.39 -0.02 -0.15 16 34 H 0.20 -2.90 8.05 -2.39 -0.02 -2.92 16 35 H 0.19 -2.42 6.62 -2.39 -0.02 -2.43 16 36 H 0.13 1.46 7.15 -2.91 -0.02 1.43 16 37 H 0.12 -0.43 7.18 -2.39 -0.02 -0.45 16 38 H 0.40 -2.16 8.74 -74.06 -0.65 -2.81 16 39 H -0.30 -3.61 7.11 99.48 0.71 -2.91 16 40 H -0.25 -0.73 7.11 99.48 0.71 -0.03 16 41 H 0.19 -2.95 8.06 -2.91 -0.02 -2.97 16 42 H 0.20 -3.11 7.52 -2.91 -0.02 -3.13 16 43 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 44 H 0.13 -1.05 7.39 -2.38 -0.02 -1.07 16 Total: 0.00 -31.58 404.83 -0.72 -32.31 By element: Atomic # 1 Polarization: -21.51 SS G_CDS: 0.46 Total: -21.06 kcal Atomic # 6 Polarization: 7.50 SS G_CDS: 3.37 Total: 10.88 kcal Atomic # 8 Polarization: -32.24 SS G_CDS: -6.52 Total: -38.76 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.74 Total: 0.10 kcal Atomic # 14 Polarization: 1.32 SS G_CDS: 2.12 Total: 3.44 kcal Atomic # 16 Polarization: 14.03 SS G_CDS: -0.28 Total: 13.75 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -0.62 Total: -0.66 kcal Total: -31.58 -0.72 -32.31 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_7425988_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.898 kcal (2) G-P(sol) polarization free energy of solvation -31.584 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.482 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.307 kcal (6) G-S(sol) free energy of system = (1) + (5) -199.205 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds