Wall clock time and date at job start Mon Mar 8 2021 10:59:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.45200 * 109.46770 * 2 1 4 4 C 1.34234 * 116.99720 * 179.97438 * 3 2 1 5 5 O 1.20822 * 119.99813 * 359.97438 * 4 3 2 6 6 C 1.50691 * 120.00165 * 180.02562 * 4 3 2 7 7 H 1.09003 * 112.85405 * 311.20083 * 6 4 3 8 8 C 1.53965 * 113.74410 * 82.40161 * 6 4 3 9 9 C 1.53780 * 87.01838 * 139.94368 * 8 6 4 10 10 F 1.39905 * 113.61457 * 220.04840 * 9 8 6 11 11 C 1.52999 * 113.61453 * 89.23383 * 9 8 6 12 12 S 1.81397 * 109.47236 * 80.85763 * 11 9 8 13 13 O 1.42103 * 110.54477 * 291.62670 * 12 11 9 14 14 O 1.42107 * 110.54042 * 68.37705 * 12 11 9 15 15 O 1.52202 * 104.45174 * 179.97438 * 12 11 9 16 16 C 1.35961 * 113.99784 * 75.00132 * 15 12 11 17 17 C 1.38906 * 120.06186 * 90.00031 * 16 15 12 18 18 F 1.35101 * 120.04725 * 0.02562 * 17 16 15 19 19 C 1.38334 * 119.90471 * 179.97438 * 17 16 15 20 20 C 1.38259 * 120.02993 * 359.97438 * 19 17 16 21 21 C 1.50697 * 119.93633 * 180.02562 * 20 19 17 22 22 O 1.42893 * 109.47102 * 65.00356 * 21 20 19 23 23 Si 1.86296 * 109.46974 * 185.00170 * 21 20 19 24 24 C 1.38264 * 120.12252 * 0.02883 * 20 19 17 25 25 C 1.38176 * 120.10000 * 359.73763 * 24 20 19 26 26 C 1.53781 * 87.17569 * 334.64054 * 9 8 6 27 27 H 1.09000 * 109.47417 * 300.00025 * 1 2 3 28 28 H 1.09004 * 109.47196 * 59.99977 * 1 2 3 29 29 H 1.08999 * 109.47301 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.46975 * 240.00201 * 2 1 3 31 31 H 1.08995 * 109.46977 * 120.00208 * 2 1 3 32 32 H 1.09000 * 113.60928 * 25.42425 * 8 6 4 33 33 H 1.08995 * 113.66684 * 254.47608 * 8 6 4 34 34 H 1.09002 * 109.47442 * 200.86227 * 11 9 8 35 35 H 1.09008 * 109.46889 * 320.85840 * 11 9 8 36 36 H 1.07995 * 119.98195 * 180.02562 * 19 17 16 37 37 H 1.09006 * 109.46947 * 305.00309 * 21 20 19 38 38 H 0.96699 * 114.00549 * 59.99529 * 22 21 20 39 39 H 1.48501 * 110.00087 * 58.68451 * 23 21 20 40 40 H 1.48505 * 110.00323 * 179.97438 * 23 21 20 41 41 H 1.07997 * 119.94657 * 180.02562 * 24 20 19 42 42 H 1.07998 * 120.02053 * 180.25840 * 25 24 20 43 43 H 1.09001 * 113.61695 * 139.93767 * 26 9 8 44 44 H 1.09002 * 113.61213 * 270.75827 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0015 6 6 3.9207 2.9374 0.0012 7 1 3.4714 3.5817 -0.7546 8 6 3.9850 3.5811 1.3983 9 6 5.3561 4.1436 0.9879 10 9 6.3087 4.1007 2.0117 11 6 5.2783 5.5109 0.3058 12 16 5.1161 6.8065 1.5650 13 8 3.8507 6.7231 2.2062 14 8 6.3142 6.9203 2.3206 15 8 5.0499 8.1027 0.7700 16 6 3.8573 8.3118 0.1516 17 6 2.8429 8.9958 0.8093 18 9 3.0400 9.4548 2.0646 19 6 1.6309 9.2072 0.1768 20 6 1.4302 8.7387 -1.1084 21 6 0.1092 8.9707 -1.7957 22 8 -0.0809 10.3718 -2.0017 23 14 0.1024 8.0947 -3.4398 24 6 2.4391 8.0577 -1.7642 25 6 3.6534 7.8478 -1.1391 26 6 5.4582 2.9681 0.0017 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5138 0.8899 32 1 4.0358 2.8564 2.2109 33 1 3.2289 4.3490 1.5614 34 1 6.1855 5.6797 -0.2744 35 1 4.4131 5.5377 -0.3567 36 1 0.8415 9.7391 0.6869 37 1 -0.6972 8.5822 -1.1736 38 1 0.6015 10.7852 -2.5481 39 1 0.3310 6.6408 -3.2416 40 1 -1.1952 8.3151 -4.1275 41 1 2.2793 7.6933 -2.7682 42 1 4.4420 7.3194 -1.6541 43 1 5.8898 3.2420 -0.9610 44 1 5.9139 2.0760 0.4315 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_7834718_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:59:26 Heat of formation + Delta-G solvation = -243.137859 kcal Electronic energy + Delta-G solvation = -36280.291721 eV Core-core repulsion = 30930.271339 eV Total energy + Delta-G solvation = -5350.020382 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.092 amu Computer time = 2.22 seconds Orbital eigenvalues (eV) -50.22440 -49.09058 -42.35766 -41.94051 -40.19899 -39.71140 -38.44005 -37.66353 -37.57471 -37.30008 -32.91955 -32.67472 -32.25465 -31.67926 -27.51637 -27.40884 -27.22798 -24.76119 -24.16400 -23.83445 -22.47164 -22.00174 -20.67562 -19.94987 -19.45705 -19.21738 -18.92323 -18.69746 -18.18187 -17.95045 -17.74214 -17.36460 -17.16135 -16.96611 -16.81870 -16.45140 -16.29605 -16.17293 -15.91406 -15.67387 -15.50297 -15.44121 -14.96469 -14.77449 -14.57232 -14.39604 -14.29455 -14.21900 -13.88030 -13.84681 -13.77109 -13.41866 -13.38737 -13.24319 -13.16858 -13.05316 -12.99172 -12.90523 -12.66383 -12.59891 -12.43493 -12.19500 -12.08768 -11.63023 -11.61746 -11.51576 -10.83321 -10.54138 -10.21004 -5.30097 -1.43801 -0.54493 -0.41961 0.70246 0.96185 0.97915 1.36861 1.44608 1.74478 1.80391 2.17819 2.41003 2.52653 2.59313 2.67466 2.77127 2.96103 3.00808 3.08924 3.12382 3.28583 3.37412 3.46658 3.57984 3.65735 3.73016 3.75641 3.86366 3.89798 3.94600 4.11362 4.20095 4.22301 4.24500 4.29090 4.36559 4.39254 4.42999 4.48924 4.55954 4.63196 4.71521 4.76926 4.82667 4.93086 5.24333 5.32938 6.27771 6.58622 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.354 6.354 4 C 0.475 3.525 5 O -0.499 6.499 6 C -0.108 4.108 7 H 0.135 0.865 8 C -0.149 4.149 9 C 0.103 3.897 10 F -0.178 7.178 11 C -0.671 4.671 12 S 2.591 3.409 13 O -0.934 6.934 14 O -0.898 6.898 15 O -0.651 6.651 16 C 0.028 3.972 17 C 0.141 3.859 18 F -0.112 7.112 19 C -0.111 4.111 20 C -0.070 4.070 21 C -0.075 4.075 22 O -0.533 6.533 23 Si 0.690 3.310 24 C -0.111 4.111 25 C -0.098 4.098 26 C -0.120 4.120 27 H 0.068 0.932 28 H 0.067 0.933 29 H 0.082 0.918 30 H 0.072 0.928 31 H 0.072 0.928 32 H 0.117 0.883 33 H 0.112 0.888 34 H 0.162 0.838 35 H 0.156 0.844 36 H 0.158 0.842 37 H 0.124 0.876 38 H 0.382 0.618 39 H -0.251 1.251 40 H -0.249 1.249 41 H 0.152 0.848 42 H 0.158 0.842 43 H 0.100 0.900 44 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.661 0.107 -8.850 9.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.317 3.683 5 O -0.386 6.386 6 C -0.127 4.127 7 H 0.152 0.848 8 C -0.186 4.186 9 C 0.083 3.917 10 F -0.158 7.158 11 C -0.795 4.795 12 S 2.683 3.317 13 O -0.932 6.932 14 O -0.896 6.896 15 O -0.609 6.609 16 C -0.015 4.015 17 C 0.119 3.881 18 F -0.090 7.090 19 C -0.130 4.130 20 C -0.072 4.072 21 C -0.185 4.185 22 O -0.339 6.339 23 Si 0.590 3.410 24 C -0.129 4.129 25 C -0.118 4.118 26 C -0.158 4.158 27 H 0.087 0.913 28 H 0.086 0.914 29 H 0.101 0.899 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.135 0.865 33 H 0.130 0.870 34 H 0.180 0.820 35 H 0.174 0.826 36 H 0.176 0.824 37 H 0.142 0.858 38 H 0.230 0.770 39 H -0.176 1.176 40 H -0.173 1.173 41 H 0.169 0.831 42 H 0.175 0.825 43 H 0.119 0.881 44 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -4.195 -0.490 -8.269 9.285 hybrid contribution 0.363 -0.486 0.492 0.781 sum -3.831 -0.975 -7.777 8.724 Atomic orbital electron populations 1.21830 0.92195 1.03381 1.03710 1.23134 0.95707 0.79538 1.02922 1.86506 1.23969 1.33057 1.83581 1.23109 0.80929 0.91745 0.72528 1.90709 1.60518 1.42646 1.44691 1.22313 0.97281 0.92263 1.00870 0.84767 1.23905 0.95877 1.02140 0.96710 1.21521 0.89022 0.93323 0.87805 1.93017 1.65777 1.97197 1.59855 1.31295 1.14375 1.13347 1.20500 1.05834 0.75492 0.74781 0.75550 1.93681 1.42907 1.84395 1.72234 1.93707 1.47696 1.83151 1.65061 1.85834 1.41249 1.61067 1.72784 1.18120 0.81537 1.07790 0.94067 1.17777 0.93662 0.95902 0.80739 1.91617 1.95238 1.85639 1.36489 1.21109 0.95794 1.00991 0.95131 1.20528 0.96922 0.95773 0.93941 1.25229 0.95074 0.89061 1.09146 1.86569 1.53015 1.19363 1.74920 0.94849 0.86818 0.80197 0.79100 1.20978 0.91890 0.99556 1.00452 1.21250 0.98925 1.00067 0.91585 1.23609 0.93479 0.98113 1.00631 0.91265 0.91375 0.89885 0.90947 0.90915 0.86490 0.87001 0.81985 0.82602 0.82423 0.85843 0.76980 1.17565 1.17349 0.83115 0.82474 0.88118 0.86038 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.34 10.29 37.16 0.38 0.73 16 2 C 0.06 -0.03 6.19 37.16 0.23 0.20 16 3 O -0.35 -0.23 10.22 -39.27 -0.40 -0.63 16 4 C 0.47 0.40 7.49 36.00 0.27 0.67 16 5 O -0.50 -1.86 15.65 -18.75 -0.29 -2.15 16 6 C -0.11 0.24 3.91 -90.87 -0.36 -0.12 16 7 H 0.13 -0.72 7.64 -51.93 -0.40 -1.12 16 8 C -0.15 0.19 7.11 -25.82 -0.18 0.01 16 9 C 0.10 -0.08 1.76 -89.81 -0.16 -0.24 16 10 F -0.18 -0.46 16.37 2.25 0.04 -0.43 16 11 C -0.67 2.08 5.05 37.16 0.19 2.27 16 12 S 2.59 4.72 4.91 -107.50 -0.53 4.19 16 13 O -0.93 -3.20 15.19 -67.03 -1.02 -4.22 16 14 O -0.90 -5.37 17.56 -67.04 -1.18 -6.54 16 15 O -0.65 -0.77 9.92 -51.94 -0.52 -1.28 16 16 C 0.03 -0.01 4.80 -39.18 -0.19 -0.20 16 17 C 0.14 0.14 6.48 -39.30 -0.25 -0.11 16 18 F -0.11 -0.41 16.73 2.25 0.04 -0.37 16 19 C -0.11 0.16 9.66 -39.54 -0.38 -0.22 16 20 C -0.07 0.24 5.35 -104.61 -0.56 -0.32 16 21 C -0.07 0.29 2.80 36.00 0.10 0.39 16 22 O -0.53 1.58 12.83 -35.23 -0.45 1.13 16 23 Si 0.69 -3.25 29.80 -169.99 -5.07 -8.32 16 24 C -0.11 0.57 8.66 -39.59 -0.34 0.23 16 25 C -0.10 0.42 8.47 -39.45 -0.33 0.09 16 26 C -0.12 0.24 6.89 -25.92 -0.18 0.06 16 27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 29 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.07 -0.02 8.13 -51.93 -0.42 -0.45 16 32 H 0.12 -0.12 8.10 -51.93 -0.42 -0.54 16 33 H 0.11 -0.24 7.32 -51.93 -0.38 -0.62 16 34 H 0.16 -0.96 8.14 -51.92 -0.42 -1.38 16 35 H 0.16 -1.06 5.82 -51.92 -0.30 -1.37 16 36 H 0.16 -0.34 8.06 -52.49 -0.42 -0.77 16 37 H 0.12 -0.44 7.96 -51.93 -0.41 -0.85 16 38 H 0.38 -2.66 8.70 45.56 0.40 -2.27 16 39 H -0.25 0.75 7.11 56.52 0.40 1.15 16 40 H -0.25 0.20 7.11 56.52 0.40 0.61 16 41 H 0.15 -1.22 4.90 -52.49 -0.26 -1.47 16 42 H 0.16 -1.27 7.52 -52.49 -0.39 -1.66 16 43 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 44 H 0.12 -0.05 7.44 -51.93 -0.39 -0.44 16 LS Contribution 388.72 15.07 5.86 5.86 Total: 0.00 -13.25 388.72 -10.42 -23.67 By element: Atomic # 1 Polarization: -9.21 SS G_CDS: -5.13 Total: -14.34 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: -1.77 Total: 3.43 kcal Atomic # 8 Polarization: -9.84 SS G_CDS: -3.86 Total: -13.70 kcal Atomic # 9 Polarization: -0.87 SS G_CDS: 0.07 Total: -0.80 kcal Atomic # 14 Polarization: -3.25 SS G_CDS: -5.07 Total: -8.32 kcal Atomic # 16 Polarization: 4.72 SS G_CDS: -0.53 Total: 4.19 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -13.25 -10.42 -23.67 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_7834718_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -219.467 kcal (2) G-P(sol) polarization free energy of solvation -13.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -232.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.416 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.670 kcal (6) G-S(sol) free energy of system = (1) + (5) -243.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.23 seconds