Wall clock time and date at job start Mon Mar 8 2021 11:06:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86295 * 109.47342 * 2 1 4 4 C 1.50702 * 109.46997 * 120.00136 * 2 1 3 5 5 C 1.38254 * 119.94000 * 65.00166 * 4 2 1 6 6 C 1.38326 * 120.03436 * 179.97438 * 5 4 2 7 7 F 1.35099 * 120.05042 * 180.02562 * 6 5 4 8 8 C 1.38915 * 119.90531 * 359.97438 * 6 5 4 9 9 O 1.35948 * 120.06668 * 179.72529 * 8 6 5 10 10 S 1.52203 * 113.99949 * 90.00028 * 9 8 6 11 11 O 1.42099 * 104.27999 * 191.07455 * 10 9 8 12 12 O 1.42095 * 104.27718 * 318.93476 * 10 9 8 13 13 C 1.81402 * 104.44536 * 75.00454 * 10 9 8 14 14 H 1.09007 * 112.84556 * 309.66452 * 13 10 9 15 15 C 1.53777 * 113.61693 * 80.86562 * 13 10 9 16 16 C 1.53957 * 87.02086 * 139.94957 * 15 13 10 17 17 H 1.08994 * 113.66486 * 220.06637 * 16 15 13 18 18 O 1.42904 * 113.61173 * 89.19783 * 16 15 13 19 19 C 1.42902 * 113.99889 * 112.46503 * 18 16 15 20 20 C 1.50703 * 109.47117 * 179.97438 * 19 18 16 21 21 C 1.38236 * 119.99800 * 269.73011 * 20 19 18 22 22 C 1.38237 * 119.99649 * 179.74521 * 21 20 19 23 23 C 1.38239 * 119.99771 * 0.52564 * 22 21 20 24 24 C 1.38231 * 120.00263 * 359.75207 * 23 22 21 25 25 C 1.38231 * 120.00018 * 90.00143 * 20 19 18 26 26 C 1.53778 * 113.61171 * 178.47444 * 13 10 9 27 27 C 1.38664 * 119.86796 * 0.02562 * 8 6 5 28 28 C 1.38176 * 119.97332 * 359.97438 * 27 8 6 29 29 H 0.96708 * 113.99804 * 300.00289 * 1 2 3 30 30 H 1.08997 * 109.47162 * 239.99888 * 2 1 3 31 31 H 1.48499 * 110.00087 * 300.00133 * 3 2 1 32 32 H 1.48496 * 110.00205 * 61.32079 * 3 2 1 33 33 H 1.08004 * 119.98065 * 359.97438 * 5 4 2 34 34 H 1.08998 * 113.60962 * 254.52808 * 15 13 10 35 35 H 1.08991 * 113.61268 * 25.42929 * 15 13 10 36 36 H 1.09000 * 109.47082 * 300.00365 * 19 18 16 37 37 H 1.09000 * 109.46588 * 60.00327 * 19 18 16 38 38 H 1.07992 * 120.00177 * 0.02562 * 21 20 19 39 39 H 1.07997 * 120.00175 * 180.29534 * 22 21 20 40 40 H 1.08004 * 119.99752 * 179.76637 * 23 22 21 41 41 H 1.07997 * 120.00599 * 180.02562 * 24 23 22 42 42 H 1.08006 * 119.99572 * 0.02562 * 25 20 19 43 43 H 1.09003 * 113.61650 * 334.56372 * 26 13 10 44 44 H 1.09002 * 113.61635 * 105.38828 * 26 13 10 45 45 H 1.07998 * 120.01111 * 179.97438 * 27 8 6 46 46 H 1.07999 * 119.95322 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6839 -2.0604 1.3971 6 6 2.1445 -2.7146 2.5255 7 9 1.9035 -4.0339 2.6884 8 6 2.8563 -2.0133 3.4905 9 8 3.3057 -2.6517 4.6035 10 16 4.6985 -3.2474 4.4556 11 8 4.8517 -4.0700 5.6041 12 8 4.7040 -3.8053 3.1488 13 6 5.8132 -1.8189 4.5425 14 1 5.5227 -1.0137 3.8676 15 6 6.0987 -1.3468 5.9779 16 6 7.5554 -1.1275 5.5303 17 1 8.2920 -1.4276 6.2755 18 8 7.8013 0.1769 5.0008 19 6 8.6588 0.9815 5.8128 20 6 8.8488 2.3276 5.1623 21 6 9.8923 2.5266 4.2777 22 6 10.0634 3.7598 3.6770 23 6 9.1975 4.7971 3.9692 24 6 8.1575 4.5996 4.8581 25 6 7.9830 3.3648 5.4544 26 6 7.3019 -2.1928 4.4505 27 6 3.1021 -0.6594 3.3194 28 6 2.6396 -0.0112 2.1902 29 1 -0.3933 0.4418 0.7651 30 1 1.7923 -0.5138 -0.8899 31 1 1.5615 2.4679 -1.2085 32 1 1.5880 2.4585 1.2242 33 1 1.1308 -2.6045 0.6458 34 1 5.5801 -0.4263 6.2460 35 1 5.9853 -2.1311 6.7262 36 1 8.2089 1.1133 6.7968 37 1 9.6258 0.4897 5.9182 38 1 10.5711 1.7175 4.0525 39 1 10.8758 3.9140 2.9823 40 1 9.3335 5.7616 3.5027 41 1 7.4807 5.4098 5.0861 42 1 7.1706 3.2105 6.1492 43 1 7.5182 -3.2090 4.7805 44 1 7.7530 -1.9557 3.4870 45 1 3.6548 -0.1118 4.0684 46 1 2.8308 1.0434 2.0574 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_7834718_15608174.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:06:47 Heat of formation + Delta-G solvation = -122.874836 kcal Electronic energy + Delta-G solvation = -35015.434621 eV Core-core repulsion = 30074.086982 eV Total energy + Delta-G solvation = -4941.347640 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.101 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -50.11404 -42.18383 -40.90777 -40.10477 -40.02550 -38.31033 -37.66213 -37.18773 -37.12356 -32.80337 -32.49376 -32.10357 -31.90110 -27.66272 -27.32405 -27.11519 -26.62473 -24.55983 -23.71250 -23.58841 -22.38860 -22.02159 -21.19509 -19.71907 -19.20117 -19.13785 -18.61397 -18.25374 -17.89332 -17.64276 -17.36703 -16.83740 -16.79689 -16.74059 -16.44823 -16.24316 -16.06621 -15.84083 -15.58882 -15.35288 -15.34144 -14.93319 -14.65536 -14.41117 -14.34111 -14.17718 -14.09001 -13.96388 -13.71965 -13.60581 -13.57472 -13.32484 -13.25704 -13.22532 -13.12214 -12.85817 -12.45398 -12.28620 -12.16459 -12.00555 -11.88730 -11.87017 -11.31422 -10.90112 -10.73247 -10.39956 -10.08332 -9.91462 -9.86184 -5.13234 -1.18752 -0.37223 -0.27771 0.23292 0.40906 0.87194 1.03980 1.40480 1.79577 1.94106 2.26883 2.46691 2.64427 2.67105 2.86899 2.95015 3.08418 3.15773 3.21198 3.29695 3.35181 3.59968 3.61624 3.71560 3.77251 3.78881 3.87599 3.98821 4.02126 4.14748 4.19038 4.23333 4.24757 4.27923 4.40019 4.46183 4.51996 4.54128 4.56160 4.60040 4.61876 4.65174 4.71080 4.72753 4.89352 4.95538 5.03064 5.38338 5.44741 5.52840 5.54926 5.96408 6.01524 6.18412 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.080 4.080 3 Si 0.690 3.310 4 C -0.071 4.071 5 C -0.113 4.113 6 C 0.136 3.864 7 F -0.114 7.114 8 C 0.035 3.965 9 O -0.654 6.654 10 S 2.587 3.413 11 O -0.918 6.918 12 O -0.943 6.943 13 C -0.638 4.638 14 H 0.160 0.840 15 C -0.131 4.131 16 C 0.079 3.921 17 H 0.090 0.910 18 O -0.355 6.355 19 C 0.101 3.899 20 C -0.095 4.095 21 C -0.098 4.098 22 C -0.122 4.122 23 C -0.112 4.112 24 C -0.123 4.123 25 C -0.099 4.099 26 C -0.107 4.107 27 C -0.094 4.094 28 C -0.113 4.113 29 H 0.379 0.621 30 H 0.129 0.871 31 H -0.251 1.251 32 H -0.255 1.255 33 H 0.157 0.843 34 H 0.095 0.905 35 H 0.113 0.887 36 H 0.062 0.938 37 H 0.063 0.937 38 H 0.123 0.877 39 H 0.125 0.875 40 H 0.124 0.876 41 H 0.124 0.876 42 H 0.122 0.878 43 H 0.105 0.895 44 H 0.103 0.897 45 H 0.157 0.843 46 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.015 6.919 0.043 8.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.190 4.190 3 Si 0.590 3.410 4 C -0.072 4.072 5 C -0.131 4.131 6 C 0.115 3.885 7 F -0.092 7.092 8 C -0.008 4.008 9 O -0.613 6.613 10 S 2.683 3.317 11 O -0.916 6.916 12 O -0.942 6.942 13 C -0.746 4.746 14 H 0.177 0.823 15 C -0.169 4.169 16 C 0.019 3.981 17 H 0.108 0.892 18 O -0.274 6.274 19 C 0.025 3.975 20 C -0.095 4.095 21 C -0.116 4.116 22 C -0.140 4.140 23 C -0.130 4.130 24 C -0.141 4.141 25 C -0.117 4.117 26 C -0.146 4.146 27 C -0.114 4.114 28 C -0.131 4.131 29 H 0.227 0.773 30 H 0.146 0.854 31 H -0.176 1.176 32 H -0.180 1.180 33 H 0.175 0.825 34 H 0.114 0.886 35 H 0.132 0.868 36 H 0.080 0.920 37 H 0.081 0.919 38 H 0.141 0.859 39 H 0.143 0.857 40 H 0.142 0.858 41 H 0.142 0.858 42 H 0.140 0.860 43 H 0.124 0.876 44 H 0.121 0.879 45 H 0.174 0.826 46 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.457 6.741 -0.528 7.594 hybrid contribution -0.730 -0.100 0.953 1.204 sum 2.727 6.641 0.425 7.192 Atomic orbital electron populations 1.86657 1.16976 1.79975 1.49403 1.25174 0.84492 1.11492 0.97823 0.94884 0.91448 0.73743 0.80902 1.20419 0.96465 0.93552 0.96796 1.21072 1.00777 0.94687 0.96599 1.17772 0.97470 0.78790 0.94490 1.91600 1.91696 1.30626 1.95276 1.18067 1.05783 0.92063 0.84867 1.85763 1.54596 1.75382 1.45520 1.05846 0.74492 0.76529 0.74816 1.93656 1.83737 1.63028 1.51150 1.93667 1.83805 1.76124 1.40565 1.32195 1.12958 1.21256 1.08169 0.82261 1.23290 0.98372 1.03732 0.91537 1.22852 0.95755 0.83911 0.95549 0.89236 1.87965 1.67923 1.23996 1.47544 1.21451 0.94109 0.88617 0.93317 1.19537 0.96605 0.94119 0.99216 1.21091 0.97484 0.97421 0.95597 1.21207 0.99667 0.93172 0.99999 1.21272 0.94933 0.99194 0.97582 1.21190 0.98345 0.97255 0.97327 1.21069 0.98263 0.92854 0.99513 1.22863 0.89478 0.99590 1.02624 1.21245 1.00189 0.91018 0.98911 1.21033 0.98373 1.00775 0.92919 0.77324 0.85363 1.17573 1.17980 0.82526 0.88604 0.86846 0.91974 0.91903 0.85870 0.85717 0.85816 0.85776 0.85962 0.87650 0.87850 0.82588 0.83242 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.42 12.83 -35.23 -0.45 -0.03 16 2 C -0.08 0.19 2.80 36.01 0.10 0.29 16 3 Si 0.69 -2.15 29.88 -169.99 -5.08 -7.23 16 4 C -0.07 0.12 5.35 -104.61 -0.56 -0.44 16 5 C -0.11 -0.02 9.66 -39.54 -0.38 -0.41 16 6 C 0.14 0.37 6.49 -39.30 -0.25 0.12 16 7 F -0.11 -0.58 16.71 2.25 0.04 -0.54 16 8 C 0.03 0.06 4.80 -39.17 -0.19 -0.13 16 9 O -0.65 -1.78 9.92 -51.90 -0.51 -2.29 16 10 S 2.59 6.63 5.12 -107.50 -0.55 6.08 16 11 O -0.92 -4.90 17.31 -67.04 -1.16 -6.06 16 12 O -0.94 -4.75 15.94 -67.04 -1.07 -5.82 16 13 C -0.64 0.84 3.92 -25.92 -0.10 0.74 16 14 H 0.16 -0.48 6.21 -51.93 -0.32 -0.80 16 15 C -0.13 0.28 7.49 -25.83 -0.19 0.09 16 16 C 0.08 -0.16 4.38 -25.83 -0.11 -0.28 16 17 H 0.09 -0.33 7.87 -51.93 -0.41 -0.74 16 18 O -0.36 0.25 10.26 -35.23 -0.36 -0.11 16 19 C 0.10 -0.17 5.90 36.01 0.21 0.04 16 20 C -0.09 0.03 5.51 -104.62 -0.58 -0.54 16 21 C -0.10 0.03 9.70 -39.58 -0.38 -0.35 16 22 C -0.12 0.07 10.05 -39.58 -0.40 -0.33 16 23 C -0.11 0.08 10.05 -39.58 -0.40 -0.32 16 24 C -0.12 0.09 10.05 -39.59 -0.40 -0.31 16 25 C -0.10 0.06 9.70 -39.59 -0.38 -0.33 16 26 C -0.11 0.20 7.50 -25.92 -0.19 0.00 16 27 C -0.09 0.16 8.51 -39.45 -0.34 -0.18 16 28 C -0.11 0.30 8.66 -39.59 -0.34 -0.04 16 29 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 30 H 0.13 -0.41 7.96 -51.93 -0.41 -0.83 16 31 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 32 H -0.26 0.43 7.01 56.52 0.40 0.83 16 33 H 0.16 -0.13 8.06 -52.48 -0.42 -0.55 16 34 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 35 H 0.11 -0.26 7.46 -51.93 -0.39 -0.64 16 36 H 0.06 -0.17 8.09 -51.93 -0.42 -0.59 16 37 H 0.06 -0.17 8.08 -51.93 -0.42 -0.59 16 38 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 39 H 0.12 -0.27 8.06 -52.49 -0.42 -0.69 16 40 H 0.12 -0.29 8.06 -52.48 -0.42 -0.71 16 41 H 0.12 -0.30 8.06 -52.49 -0.42 -0.72 16 42 H 0.12 -0.25 8.06 -52.48 -0.42 -0.68 16 43 H 0.11 -0.31 8.10 -51.93 -0.42 -0.73 16 44 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 45 H 0.16 -0.72 7.30 -52.49 -0.38 -1.10 16 46 H 0.15 -0.76 4.83 -52.49 -0.25 -1.01 16 LS Contribution 401.82 15.07 6.06 6.06 Total: 0.00 -11.03 401.82 -13.60 -24.63 By element: Atomic # 1 Polarization: -6.70 SS G_CDS: -5.62 Total: -12.32 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -4.89 Total: -2.37 kcal Atomic # 8 Polarization: -10.75 SS G_CDS: -3.56 Total: -14.31 kcal Atomic # 9 Polarization: -0.58 SS G_CDS: 0.04 Total: -0.54 kcal Atomic # 14 Polarization: -2.15 SS G_CDS: -5.08 Total: -7.23 kcal Atomic # 16 Polarization: 6.63 SS G_CDS: -0.55 Total: 6.08 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -11.03 -13.60 -24.63 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_7834718_15608174.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.242 kcal (2) G-P(sol) polarization free energy of solvation -11.031 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.273 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.633 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.875 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds