Wall clock time and date at job start Mon Mar 8 2021 11:06:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86295 * 109.47342 * 2 1 4 4 C 1.50702 * 109.46997 * 120.00136 * 2 1 3 5 5 C 1.38254 * 119.94000 * 65.00166 * 4 2 1 6 6 C 1.38326 * 120.03436 * 179.97438 * 5 4 2 7 7 F 1.35099 * 120.05042 * 180.02562 * 6 5 4 8 8 C 1.38915 * 119.90531 * 359.97438 * 6 5 4 9 9 O 1.35948 * 120.06668 * 179.72529 * 8 6 5 10 10 S 1.52203 * 113.99949 * 90.00028 * 9 8 6 11 11 O 1.42099 * 104.27999 * 191.07455 * 10 9 8 12 12 O 1.42095 * 104.27718 * 318.93476 * 10 9 8 13 13 C 1.81402 * 104.44536 * 75.00454 * 10 9 8 14 14 H 1.09007 * 112.84556 * 309.66452 * 13 10 9 15 15 C 1.53777 * 113.61693 * 80.86562 * 13 10 9 16 16 C 1.53957 * 87.02086 * 139.94957 * 15 13 10 17 17 H 1.08994 * 113.66486 * 220.06637 * 16 15 13 18 18 O 1.42904 * 113.61173 * 89.19783 * 16 15 13 19 19 C 1.42902 * 113.99889 * 112.46503 * 18 16 15 20 20 C 1.50703 * 109.47117 * 179.97438 * 19 18 16 21 21 C 1.38236 * 119.99800 * 269.73011 * 20 19 18 22 22 C 1.38237 * 119.99649 * 179.74521 * 21 20 19 23 23 C 1.38239 * 119.99771 * 0.52564 * 22 21 20 24 24 C 1.38231 * 120.00263 * 359.75207 * 23 22 21 25 25 C 1.38231 * 120.00018 * 90.00143 * 20 19 18 26 26 C 1.53778 * 113.61171 * 178.47444 * 13 10 9 27 27 C 1.38664 * 119.86796 * 0.02562 * 8 6 5 28 28 C 1.38176 * 119.97332 * 359.97438 * 27 8 6 29 29 H 0.96708 * 113.99804 * 300.00289 * 1 2 3 30 30 H 1.08997 * 109.47162 * 239.99888 * 2 1 3 31 31 H 1.48499 * 110.00087 * 300.00133 * 3 2 1 32 32 H 1.48496 * 110.00205 * 61.32079 * 3 2 1 33 33 H 1.08004 * 119.98065 * 359.97438 * 5 4 2 34 34 H 1.08998 * 113.60962 * 254.52808 * 15 13 10 35 35 H 1.08991 * 113.61268 * 25.42929 * 15 13 10 36 36 H 1.09000 * 109.47082 * 300.00365 * 19 18 16 37 37 H 1.09000 * 109.46588 * 60.00327 * 19 18 16 38 38 H 1.07992 * 120.00177 * 0.02562 * 21 20 19 39 39 H 1.07997 * 120.00175 * 180.29534 * 22 21 20 40 40 H 1.08004 * 119.99752 * 179.76637 * 23 22 21 41 41 H 1.07997 * 120.00599 * 180.02562 * 24 23 22 42 42 H 1.08006 * 119.99572 * 0.02562 * 25 20 19 43 43 H 1.09003 * 113.61650 * 334.56372 * 26 13 10 44 44 H 1.09002 * 113.61635 * 105.38828 * 26 13 10 45 45 H 1.07998 * 120.01111 * 179.97438 * 27 8 6 46 46 H 1.07999 * 119.95322 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6839 -2.0604 1.3971 6 6 2.1445 -2.7146 2.5255 7 9 1.9035 -4.0339 2.6884 8 6 2.8563 -2.0133 3.4905 9 8 3.3057 -2.6517 4.6035 10 16 4.6985 -3.2474 4.4556 11 8 4.8517 -4.0700 5.6041 12 8 4.7040 -3.8053 3.1488 13 6 5.8132 -1.8189 4.5425 14 1 5.5227 -1.0137 3.8676 15 6 6.0987 -1.3468 5.9779 16 6 7.5554 -1.1275 5.5303 17 1 8.2920 -1.4276 6.2755 18 8 7.8013 0.1769 5.0008 19 6 8.6588 0.9815 5.8128 20 6 8.8488 2.3276 5.1623 21 6 9.8923 2.5266 4.2777 22 6 10.0634 3.7598 3.6770 23 6 9.1975 4.7971 3.9692 24 6 8.1575 4.5996 4.8581 25 6 7.9830 3.3648 5.4544 26 6 7.3019 -2.1928 4.4505 27 6 3.1021 -0.6594 3.3194 28 6 2.6396 -0.0112 2.1902 29 1 -0.3933 0.4418 0.7651 30 1 1.7923 -0.5138 -0.8899 31 1 1.5615 2.4679 -1.2085 32 1 1.5880 2.4585 1.2242 33 1 1.1308 -2.6045 0.6458 34 1 5.5801 -0.4263 6.2460 35 1 5.9853 -2.1311 6.7262 36 1 8.2089 1.1133 6.7968 37 1 9.6258 0.4897 5.9182 38 1 10.5711 1.7175 4.0525 39 1 10.8758 3.9140 2.9823 40 1 9.3335 5.7616 3.5027 41 1 7.4807 5.4098 5.0861 42 1 7.1706 3.2105 6.1492 43 1 7.5182 -3.2090 4.7805 44 1 7.7530 -1.9557 3.4870 45 1 3.6548 -0.1118 4.0684 46 1 2.8308 1.0434 2.0574 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_7834718_15608174.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:06:46 Heat of formation + Delta-G solvation = -123.268791 kcal Electronic energy + Delta-G solvation = -35015.451705 eV Core-core repulsion = 30074.086982 eV Total energy + Delta-G solvation = -4941.364723 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.101 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -50.32164 -42.23299 -40.74484 -40.04292 -39.89017 -38.54225 -37.58382 -37.40399 -36.98212 -32.64812 -32.42156 -32.06587 -31.75116 -27.53086 -27.22007 -26.95076 -26.47928 -24.49953 -23.70417 -23.44196 -22.23232 -22.03721 -21.08705 -19.76590 -19.25487 -19.15860 -18.66093 -18.23953 -17.80170 -17.54772 -17.25369 -16.92919 -16.77055 -16.58855 -16.38781 -16.18474 -15.91599 -15.80093 -15.64063 -15.24533 -15.23692 -14.82426 -14.62417 -14.29533 -14.29046 -14.22599 -14.09563 -13.82096 -13.62970 -13.57908 -13.52814 -13.44293 -13.33752 -13.21834 -13.11737 -12.83553 -12.33540 -12.09816 -12.01847 -11.82551 -11.74084 -11.70509 -11.24360 -10.75437 -10.53714 -10.33661 -10.09001 -9.78573 -9.72884 -4.88589 -1.26586 -0.37770 -0.21885 0.36685 0.53733 0.78326 1.25183 1.61785 1.98037 2.02948 2.39143 2.45297 2.61984 2.70207 2.93930 3.02313 3.22109 3.27158 3.37801 3.47920 3.49208 3.65898 3.75918 3.84593 3.91419 3.96423 3.98549 4.19137 4.26123 4.33932 4.39605 4.40056 4.45189 4.50818 4.55277 4.60930 4.65811 4.66662 4.72409 4.75629 4.78262 4.80943 4.87303 4.89188 4.98246 5.12263 5.19306 5.42347 5.59070 5.66618 5.68880 6.12735 6.21604 6.46252 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.092 4.092 3 Si 0.775 3.225 4 C -0.064 4.064 5 C -0.118 4.118 6 C 0.096 3.904 7 F -0.140 7.140 8 C 0.013 3.987 9 O -0.664 6.664 10 S 2.578 3.422 11 O -0.959 6.959 12 O -0.980 6.980 13 C -0.611 4.611 14 H 0.183 0.817 15 C -0.133 4.133 16 C 0.081 3.919 17 H 0.108 0.892 18 O -0.366 6.366 19 C 0.099 3.901 20 C -0.105 4.105 21 C -0.112 4.112 22 C -0.135 4.135 23 C -0.124 4.124 24 C -0.133 4.133 25 C -0.109 4.109 26 C -0.117 4.117 27 C -0.085 4.085 28 C -0.100 4.100 29 H 0.390 0.610 30 H 0.135 0.865 31 H -0.303 1.303 32 H -0.263 1.263 33 H 0.157 0.843 34 H 0.114 0.886 35 H 0.112 0.888 36 H 0.074 0.926 37 H 0.071 0.929 38 H 0.131 0.869 39 H 0.135 0.865 40 H 0.136 0.864 41 H 0.138 0.862 42 H 0.136 0.864 43 H 0.111 0.889 44 H 0.109 0.891 45 H 0.191 0.809 46 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.027 9.529 0.509 10.786 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.199 4.199 3 Si 0.678 3.322 4 C -0.065 4.065 5 C -0.136 4.136 6 C 0.075 3.925 7 F -0.119 7.119 8 C -0.029 4.029 9 O -0.622 6.622 10 S 2.680 3.320 11 O -0.957 6.957 12 O -0.978 6.978 13 C -0.723 4.723 14 H 0.200 0.800 15 C -0.171 4.171 16 C 0.021 3.979 17 H 0.126 0.874 18 O -0.286 6.286 19 C 0.024 3.976 20 C -0.105 4.105 21 C -0.130 4.130 22 C -0.153 4.153 23 C -0.142 4.142 24 C -0.151 4.151 25 C -0.127 4.127 26 C -0.156 4.156 27 C -0.104 4.104 28 C -0.118 4.118 29 H 0.240 0.760 30 H 0.152 0.848 31 H -0.231 1.231 32 H -0.188 1.188 33 H 0.175 0.825 34 H 0.132 0.868 35 H 0.131 0.869 36 H 0.093 0.907 37 H 0.089 0.911 38 H 0.149 0.851 39 H 0.153 0.847 40 H 0.153 0.847 41 H 0.156 0.844 42 H 0.154 0.846 43 H 0.130 0.870 44 H 0.128 0.872 45 H 0.209 0.791 46 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges 4.440 9.286 -0.044 10.293 hybrid contribution -1.058 -0.795 0.725 1.509 sum 3.383 8.490 0.681 9.165 Atomic orbital electron populations 1.86631 1.17886 1.80487 1.50330 1.25495 0.83930 1.12760 0.97752 0.93990 0.89901 0.70745 0.77522 1.20571 0.96017 0.92666 0.97295 1.21177 1.00869 0.95664 0.95937 1.18269 0.99751 0.78194 0.96313 1.91518 1.92240 1.32532 1.95588 1.18479 1.06488 0.93333 0.84617 1.85717 1.54888 1.75755 1.45869 1.05968 0.74922 0.77749 0.73408 1.93591 1.84491 1.65596 1.52030 1.93612 1.84498 1.77982 1.41714 1.32066 1.11523 1.18859 1.09859 0.80002 1.23426 0.98632 1.04461 0.90602 1.22871 0.96123 0.83326 0.95544 0.87411 1.87938 1.68126 1.24417 1.48078 1.21527 0.94612 0.87986 0.93519 1.19765 0.96597 0.94905 0.99257 1.21310 0.97956 0.97823 0.95929 1.21442 1.00159 0.93347 1.00360 1.21521 0.95068 0.99793 0.97850 1.21450 0.98589 0.97804 0.97247 1.21313 0.98684 0.92875 0.99786 1.23069 0.88681 1.00390 1.03435 1.21665 0.99546 0.89469 0.99757 1.21412 0.96619 1.02005 0.91724 0.76000 0.84769 1.23136 1.18817 0.82488 0.86755 0.86938 0.90744 0.91084 0.85131 0.84729 0.84655 0.84440 0.84625 0.87029 0.87241 0.79142 0.80030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.00 12.83 -148.98 -1.91 -0.91 16 2 C -0.09 0.51 2.80 71.24 0.20 0.71 16 3 Si 0.78 -6.16 29.88 68.60 2.05 -4.11 16 4 C -0.06 0.26 5.35 -19.85 -0.11 0.15 16 5 C -0.12 -0.20 9.66 22.29 0.22 0.02 16 6 C 0.10 0.73 6.49 22.45 0.15 0.88 16 7 F -0.14 -1.95 16.71 44.97 0.75 -1.20 16 8 C 0.01 0.06 4.80 22.53 0.11 0.16 16 9 O -0.66 -4.56 9.92 -62.06 -0.62 -5.18 16 10 S 2.58 16.99 5.12 -56.49 -0.29 16.70 16 11 O -0.96 -12.42 17.31 -118.57 -2.05 -14.47 16 12 O -0.98 -12.29 15.94 -118.57 -1.89 -14.18 16 13 C -0.61 2.27 3.92 31.12 0.12 2.39 16 14 H 0.18 -1.53 6.21 -2.38 -0.01 -1.55 16 15 C -0.13 0.80 7.49 31.18 0.23 1.04 16 16 C 0.08 -0.50 4.38 31.18 0.14 -0.37 16 17 H 0.11 -1.04 7.87 -2.39 -0.02 -1.06 16 18 O -0.37 1.39 10.26 -148.98 -1.53 -0.13 16 19 C 0.10 -0.53 5.90 71.24 0.42 -0.11 16 20 C -0.11 0.22 5.51 -19.87 -0.11 0.11 16 21 C -0.11 0.17 9.70 22.27 0.22 0.38 16 22 C -0.14 0.23 10.05 22.27 0.22 0.45 16 23 C -0.12 0.27 10.05 22.27 0.22 0.49 16 24 C -0.13 0.35 10.05 22.27 0.22 0.57 16 25 C -0.11 0.29 9.70 22.27 0.22 0.51 16 26 C -0.12 0.56 7.50 31.12 0.23 0.79 16 27 C -0.08 0.43 8.51 22.36 0.19 0.62 16 28 C -0.10 0.76 8.66 22.26 0.19 0.95 16 29 H 0.39 -3.14 8.70 -74.05 -0.64 -3.78 16 30 H 0.13 -0.93 7.96 -2.39 -0.02 -0.95 16 31 H -0.30 -0.32 7.11 99.48 0.71 0.39 16 32 H -0.26 1.69 7.01 99.48 0.70 2.38 16 33 H 0.16 0.06 8.06 -2.91 -0.02 0.04 16 34 H 0.11 -1.08 8.14 -2.39 -0.02 -1.10 16 35 H 0.11 -0.60 7.46 -2.39 -0.02 -0.61 16 36 H 0.07 -0.59 8.09 -2.39 -0.02 -0.61 16 37 H 0.07 -0.51 8.08 -2.39 -0.02 -0.53 16 38 H 0.13 -0.53 8.06 -2.91 -0.02 -0.55 16 39 H 0.13 -0.65 8.06 -2.91 -0.02 -0.67 16 40 H 0.14 -0.74 8.06 -2.91 -0.02 -0.77 16 41 H 0.14 -0.86 8.06 -2.91 -0.02 -0.88 16 42 H 0.14 -0.84 8.06 -2.91 -0.02 -0.86 16 43 H 0.11 -0.67 8.10 -2.39 -0.02 -0.69 16 44 H 0.11 -0.63 8.14 -2.39 -0.02 -0.65 16 45 H 0.19 -2.42 7.30 -2.91 -0.02 -2.44 16 46 H 0.18 -2.56 4.83 -2.91 -0.01 -2.58 16 Total: 0.00 -29.21 401.82 -1.99 -31.20 By element: Atomic # 1 Polarization: -17.88 SS G_CDS: 0.42 Total: -17.46 kcal Atomic # 6 Polarization: 6.66 SS G_CDS: 3.08 Total: 9.74 kcal Atomic # 8 Polarization: -26.87 SS G_CDS: -8.00 Total: -34.87 kcal Atomic # 9 Polarization: -1.95 SS G_CDS: 0.75 Total: -1.20 kcal Atomic # 14 Polarization: -6.16 SS G_CDS: 2.05 Total: -4.11 kcal Atomic # 16 Polarization: 16.99 SS G_CDS: -0.29 Total: 16.70 kcal Total: -29.21 -1.99 -31.20 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_7834718_15608174.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.070 kcal (2) G-P(sol) polarization free energy of solvation -29.213 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.985 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.198 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds