Wall clock time and date at job start Mon Mar 8 2021 11:17:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45205 * 109.46939 * 2 1 4 4 C 1.34227 * 116.99601 * 180.02562 * 3 2 1 5 5 O 1.20827 * 120.00441 * 0.02562 * 4 3 2 6 6 C 1.50699 * 119.99964 * 180.02562 * 4 3 2 7 7 H 1.08996 * 109.46937 * 300.00312 * 6 4 3 8 8 C 1.53004 * 109.47094 * 59.99857 * 6 4 3 9 9 C 1.52995 * 109.47352 * 180.02562 * 8 6 4 10 10 C 1.52998 * 109.47235 * 300.00365 * 9 8 6 11 11 F 1.39901 * 109.47557 * 180.02562 * 10 9 8 12 12 C 1.53009 * 109.46846 * 299.99588 * 10 9 8 13 13 S 1.81397 * 109.47235 * 305.00026 * 12 10 9 14 14 O 1.42105 * 110.54275 * 68.37271 * 13 12 10 15 15 O 1.42101 * 110.54298 * 291.62373 * 13 12 10 16 16 O 1.52200 * 104.44908 * 179.97438 * 13 12 10 17 17 C 1.35960 * 113.99608 * 75.00210 * 16 13 12 18 18 C 1.38907 * 120.06125 * 89.99941 * 17 16 13 19 19 F 1.35098 * 120.05146 * 359.97438 * 18 17 16 20 20 C 1.38332 * 119.90431 * 179.97438 * 18 17 16 21 21 C 1.38261 * 120.02648 * 0.02562 * 20 18 17 22 22 C 1.50701 * 119.93578 * 179.97438 * 21 20 18 23 23 O 1.42906 * 109.47062 * 65.00483 * 22 21 20 24 24 Si 1.86301 * 109.47292 * 185.00367 * 22 21 20 25 25 C 1.38258 * 120.12731 * 359.97438 * 21 20 18 26 26 C 1.38178 * 120.09511 * 359.74176 * 25 21 20 27 27 C 1.52997 * 109.47368 * 59.99322 * 10 9 8 28 28 C 1.52995 * 109.47496 * 300.00519 * 27 10 9 29 29 H 1.09005 * 109.46944 * 59.99694 * 1 2 3 30 30 H 1.09000 * 109.47580 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47440 * 300.00111 * 1 2 3 32 32 H 1.08991 * 109.46989 * 240.00236 * 2 1 3 33 33 H 1.09001 * 109.46939 * 119.99787 * 2 1 3 34 34 H 1.08997 * 109.47218 * 300.00358 * 8 6 4 35 35 H 1.09003 * 109.47270 * 59.99877 * 8 6 4 36 36 H 1.08999 * 109.47842 * 180.02562 * 9 8 6 37 37 H 1.09003 * 109.47137 * 59.99668 * 9 8 6 38 38 H 1.09004 * 109.47149 * 185.00052 * 12 10 9 39 39 H 1.09000 * 109.46805 * 64.99903 * 12 10 9 40 40 H 1.07994 * 119.98726 * 180.02562 * 20 18 17 41 41 H 1.09001 * 109.47244 * 305.00777 * 22 21 20 42 42 H 0.96698 * 113.99689 * 59.99401 * 23 22 21 43 43 H 1.48499 * 109.99786 * 58.68228 * 24 22 21 44 44 H 1.48503 * 110.00001 * 180.02562 * 24 22 21 45 45 H 1.08004 * 119.95452 * 179.97438 * 25 21 20 46 46 H 1.08004 * 120.01796 * 180.25846 * 26 25 21 47 47 H 1.09003 * 109.47006 * 60.00695 * 27 10 9 48 48 H 1.09006 * 109.47304 * 180.02562 * 27 10 9 49 49 H 1.08995 * 109.47157 * 179.97438 * 28 27 10 50 50 H 1.09003 * 109.47137 * 300.00096 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0808 0.5867 -0.0015 6 6 3.9207 2.9374 0.0000 7 1 3.5843 3.4700 -0.8894 8 6 3.4498 3.6836 1.2499 9 6 4.0340 5.0976 1.2502 10 6 5.5619 5.0181 1.2491 11 9 6.0963 6.3111 1.2499 12 6 6.0346 4.2708 2.4978 13 16 5.3531 5.0714 3.9759 14 8 3.9451 4.8895 4.0372 15 8 5.9347 6.3546 4.1610 16 8 5.8886 4.2450 5.1365 17 6 7.2022 4.4635 5.4111 18 6 7.5688 5.4513 6.3163 19 9 6.6207 6.1968 6.9250 20 6 8.9062 5.6705 6.5937 21 6 9.8762 4.9077 5.9701 22 6 11.3326 5.1486 6.2734 23 8 11.5940 4.8265 7.6409 24 14 12.3824 4.0747 5.1709 25 6 9.5126 3.9242 5.0689 26 6 8.1780 3.6969 4.7925 27 6 6.0329 4.2719 -0.0007 28 6 5.4487 2.8579 -0.0010 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5138 0.8900 32 1 1.8933 -0.5138 -0.8899 33 1 1.8933 -0.5138 0.8900 34 1 2.3613 3.7407 1.2505 35 1 3.7861 3.1510 2.1395 36 1 3.6989 5.6292 2.1409 37 1 3.6973 5.6301 0.3607 38 1 7.1236 4.2911 2.5429 39 1 5.6920 3.2369 2.4538 40 1 9.1927 6.4378 7.2975 41 1 11.5723 6.1968 6.0948 42 1 11.4026 3.9073 7.8720 43 1 12.0967 4.3777 3.7455 44 1 13.8210 4.3026 5.4607 45 1 10.2726 3.3302 4.5832 46 1 7.8952 2.9255 4.0914 47 1 5.6962 4.8043 -0.8903 48 1 7.1215 4.2148 -0.0013 49 1 5.7838 2.3264 -0.8916 50 1 5.7853 2.3254 0.8885 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_7834718_16464696.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:17:44 Heat of formation + Delta-G solvation = -278.232722 kcal Electronic energy + Delta-G solvation = -41268.392639 eV Core-core repulsion = 35605.775192 eV Total energy + Delta-G solvation = -5662.617447 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.123 amu Computer time = 3.14 seconds Orbital eigenvalues (eV) -50.18218 -49.06709 -42.31545 -41.85256 -40.15924 -39.73672 -38.40177 -37.63312 -37.59903 -37.28933 -33.68704 -32.69726 -32.45166 -32.27938 -32.15847 -29.41205 -27.33067 -25.50089 -24.67228 -24.38452 -23.81000 -23.68110 -22.10632 -21.86013 -20.70979 -19.69610 -19.22087 -19.05769 -18.77399 -18.67798 -18.17827 -18.00858 -17.66826 -17.48748 -17.36563 -16.99498 -16.70221 -16.51114 -16.30514 -16.14272 -15.86170 -15.58070 -15.44972 -15.41486 -15.12799 -15.08881 -14.65686 -14.56700 -14.35136 -14.31825 -14.21302 -13.88405 -13.82761 -13.72188 -13.69498 -13.34365 -13.29135 -13.24299 -13.13678 -12.95896 -12.93736 -12.91717 -12.81791 -12.58350 -12.46448 -12.37838 -12.09240 -12.01063 -11.76904 -11.54771 -11.38571 -11.28961 -10.78503 -10.47915 -10.15354 -5.25327 -1.37062 -0.48271 -0.35782 0.75346 1.01087 1.11178 1.42606 1.55347 1.78875 1.86743 2.25040 2.54397 2.67149 2.71475 2.93015 3.00440 3.06863 3.15831 3.17329 3.28382 3.33410 3.50079 3.51974 3.56174 3.66610 3.75235 3.80723 3.84708 3.92282 3.95995 3.98163 4.02291 4.07826 4.16406 4.25431 4.30274 4.35284 4.43789 4.45051 4.48529 4.60521 4.61085 4.65581 4.69051 4.71534 4.77793 4.79127 4.82283 4.92250 4.99055 5.01641 5.29911 5.41943 6.31965 6.67321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.467 3.533 5 O -0.505 6.505 6 C -0.087 4.087 7 H 0.119 0.881 8 C -0.109 4.109 9 C -0.171 4.171 10 C 0.141 3.859 11 F -0.190 7.190 12 C -0.694 4.694 13 S 2.587 3.413 14 O -0.908 6.908 15 O -0.929 6.929 16 O -0.653 6.653 17 C 0.028 3.972 18 C 0.140 3.860 19 F -0.112 7.112 20 C -0.112 4.112 21 C -0.071 4.071 22 C -0.075 4.075 23 O -0.533 6.533 24 Si 0.691 3.309 25 C -0.111 4.111 26 C -0.096 4.096 27 C -0.128 4.128 28 C -0.108 4.108 29 H 0.068 0.932 30 H 0.081 0.919 31 H 0.069 0.931 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.100 0.900 35 H 0.074 0.926 36 H 0.094 0.906 37 H 0.104 0.896 38 H 0.152 0.848 39 H 0.161 0.839 40 H 0.158 0.842 41 H 0.124 0.876 42 H 0.382 0.618 43 H -0.251 1.251 44 H -0.249 1.249 45 H 0.152 0.848 46 H 0.157 0.843 47 H 0.091 0.909 48 H 0.090 0.910 49 H 0.089 0.911 50 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.571 -5.325 -2.733 6.514 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.309 3.691 5 O -0.393 6.393 6 C -0.106 4.106 7 H 0.137 0.863 8 C -0.146 4.146 9 C -0.208 4.208 10 C 0.122 3.878 11 F -0.170 7.170 12 C -0.819 4.819 13 S 2.680 3.320 14 O -0.906 6.906 15 O -0.927 6.927 16 O -0.611 6.611 17 C -0.014 4.014 18 C 0.118 3.882 19 F -0.091 7.091 20 C -0.131 4.131 21 C -0.072 4.072 22 C -0.185 4.185 23 O -0.339 6.339 24 Si 0.591 3.409 25 C -0.128 4.128 26 C -0.116 4.116 27 C -0.166 4.166 28 C -0.145 4.145 29 H 0.087 0.913 30 H 0.100 0.900 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.090 0.910 34 H 0.118 0.882 35 H 0.092 0.908 36 H 0.112 0.888 37 H 0.123 0.877 38 H 0.170 0.830 39 H 0.179 0.821 40 H 0.176 0.824 41 H 0.142 0.858 42 H 0.230 0.770 43 H -0.176 1.176 44 H -0.173 1.173 45 H 0.169 0.831 46 H 0.175 0.825 47 H 0.110 0.890 48 H 0.108 0.892 49 H 0.107 0.893 50 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 3.016 -4.672 -2.801 6.227 hybrid contribution -0.429 0.159 -0.274 0.533 sum 2.587 -4.513 -3.075 6.042 Atomic orbital electron populations 1.21830 0.92241 1.03312 1.03767 1.23105 0.95701 0.79693 1.02763 1.86510 1.24163 1.32881 1.83589 1.23577 0.80869 0.92327 0.72285 1.90687 1.60479 1.43040 1.45090 1.21243 0.96544 0.90388 1.02474 0.86342 1.21527 1.03276 0.93725 0.96080 1.22631 0.91897 0.99500 1.06819 1.20426 0.94127 0.78873 0.94417 1.93003 1.87715 1.38846 1.97411 1.31699 1.15597 1.15788 1.18792 1.05942 0.75766 0.74810 0.75445 1.93678 1.27125 1.85335 1.84492 1.93704 1.78165 1.38758 1.82086 1.85788 1.30817 1.78381 1.66162 1.18103 0.78509 1.00872 1.03949 1.17770 0.87044 0.90173 0.93198 1.91607 1.63063 1.74057 1.80327 1.21101 0.89008 1.01536 1.01412 1.20523 0.97039 0.94601 0.95044 1.25235 0.94179 1.07765 0.91329 1.86567 1.88739 1.34213 1.24356 0.94838 0.79592 0.88534 0.77925 1.20974 0.95280 0.98102 0.98469 1.21245 0.91828 0.98510 1.00057 1.22062 1.02580 0.95705 0.96273 1.21527 0.91827 0.96215 1.04931 0.91341 0.89977 0.91236 0.91069 0.91029 0.88194 0.90766 0.88779 0.87713 0.83034 0.82079 0.82394 0.85835 0.77005 1.17608 1.17325 0.83109 0.82531 0.89028 0.89156 0.89271 0.90227 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.29 10.29 37.16 0.38 0.67 16 2 C 0.06 -0.01 6.19 37.16 0.23 0.22 16 3 O -0.35 -0.34 10.12 -39.25 -0.40 -0.73 16 4 C 0.47 0.44 7.26 36.01 0.26 0.70 16 5 O -0.51 -1.72 15.73 -18.75 -0.29 -2.01 16 6 C -0.09 0.16 2.63 -91.77 -0.24 -0.08 16 7 H 0.12 -0.42 8.14 -51.93 -0.42 -0.85 16 8 C -0.11 0.13 4.56 -26.73 -0.12 0.01 16 9 C -0.17 0.13 4.62 -26.73 -0.12 0.01 16 10 C 0.14 -0.12 1.11 -90.62 -0.10 -0.22 16 11 F -0.19 -0.34 16.36 2.25 0.04 -0.30 16 12 C -0.69 1.19 4.08 37.16 0.15 1.35 16 13 S 2.59 6.60 4.41 -107.50 -0.47 6.12 16 14 O -0.91 -4.08 14.90 -67.04 -1.00 -5.08 16 15 O -0.93 -5.00 15.65 -67.03 -1.05 -6.05 16 16 O -0.65 -1.45 9.92 -51.94 -0.52 -1.96 16 17 C 0.03 0.03 4.80 -39.18 -0.19 -0.15 16 18 C 0.14 0.33 6.48 -39.30 -0.25 0.08 16 19 F -0.11 -0.53 16.73 2.25 0.04 -0.49 16 20 C -0.11 0.02 9.66 -39.54 -0.38 -0.37 16 21 C -0.07 0.15 5.35 -104.61 -0.56 -0.41 16 22 C -0.07 0.21 2.80 36.01 0.10 0.31 16 23 O -0.53 1.15 12.83 -35.23 -0.45 0.70 16 24 Si 0.69 -2.58 29.80 -169.99 -5.07 -7.65 16 25 C -0.11 0.40 8.66 -39.60 -0.34 0.05 16 26 C -0.10 0.25 8.47 -39.45 -0.33 -0.08 16 27 C -0.13 0.37 5.19 -26.74 -0.14 0.23 16 28 C -0.11 0.28 4.22 -26.73 -0.11 0.16 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 33 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 34 H 0.10 -0.14 8.11 -51.93 -0.42 -0.56 16 35 H 0.07 -0.08 6.06 -51.93 -0.31 -0.40 16 36 H 0.09 0.07 5.40 -51.93 -0.28 -0.21 16 37 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 38 H 0.15 -0.65 6.63 -51.92 -0.34 -0.99 16 39 H 0.16 -0.66 4.83 -51.92 -0.25 -0.92 16 40 H 0.16 -0.18 8.06 -52.49 -0.42 -0.60 16 41 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 42 H 0.38 -2.37 8.70 45.56 0.40 -1.97 16 43 H -0.25 0.44 7.11 56.52 0.40 0.84 16 44 H -0.25 0.01 7.11 56.52 0.40 0.41 16 45 H 0.15 -1.00 4.90 -52.48 -0.26 -1.25 16 46 H 0.16 -0.97 7.52 -52.48 -0.39 -1.36 16 47 H 0.09 -0.33 8.14 -51.93 -0.42 -0.76 16 48 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 49 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 50 H 0.08 -0.22 6.28 -51.93 -0.33 -0.55 16 LS Contribution 412.83 15.07 6.22 6.22 Total: 0.00 -12.20 412.83 -11.18 -23.38 By element: Atomic # 1 Polarization: -8.17 SS G_CDS: -6.45 Total: -14.63 kcal Atomic # 6 Polarization: 4.26 SS G_CDS: -1.77 Total: 2.48 kcal Atomic # 8 Polarization: -11.42 SS G_CDS: -3.71 Total: -15.13 kcal Atomic # 9 Polarization: -0.87 SS G_CDS: 0.07 Total: -0.79 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: -5.07 Total: -7.65 kcal Atomic # 16 Polarization: 6.60 SS G_CDS: -0.47 Total: 6.12 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -12.20 -11.18 -23.38 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_7834718_16464696.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -254.857 kcal (2) G-P(sol) polarization free energy of solvation -12.201 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -267.057 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.376 kcal (6) G-S(sol) free energy of system = (1) + (5) -278.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.14 seconds