Wall clock time and date at job start Mon Mar 8 2021 11:20:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45203 * 109.47481 * 2 1 4 4 C 1.34230 * 116.99841 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00100 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99704 * 179.97438 * 4 3 2 7 7 H 1.08993 * 112.85232 * 311.20756 * 6 4 3 8 8 C 1.53782 * 113.68367 * 82.47263 * 6 4 3 9 9 C 1.53782 * 87.07904 * 139.99448 * 8 6 4 10 10 F 1.39893 * 113.69447 * 89.12489 * 9 8 6 11 11 C 1.53005 * 113.61199 * 220.01737 * 9 8 6 12 12 S 1.81396 * 109.47169 * 282.49479 * 11 9 8 13 13 O 1.42095 * 110.54255 * 68.37677 * 12 11 9 14 14 O 1.42101 * 110.53999 * 291.62477 * 12 11 9 15 15 O 1.52202 * 104.44802 * 180.02562 * 12 11 9 16 16 C 1.35951 * 114.00399 * 74.99916 * 15 12 11 17 17 C 1.38908 * 120.06149 * 89.99870 * 16 15 12 18 18 F 1.35097 * 120.04712 * 359.97438 * 17 16 15 19 19 C 1.38330 * 119.89982 * 179.97438 * 17 16 15 20 20 C 1.38255 * 120.03493 * 359.97438 * 19 17 16 21 21 C 1.50705 * 119.93698 * 179.97438 * 20 19 17 22 22 O 1.42894 * 109.47171 * 300.00394 * 21 20 19 23 23 Si 1.86298 * 109.46780 * 179.97438 * 21 20 19 24 24 C 1.38259 * 120.12295 * 0.27876 * 20 19 17 25 25 C 1.38181 * 120.09565 * 359.49171 * 24 20 19 26 26 C 1.53777 * 113.61163 * 180.02562 * 6 4 3 27 27 H 1.08998 * 109.47171 * 59.99664 * 1 2 3 28 28 H 1.08994 * 109.47624 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.46849 * 300.00257 * 1 2 3 30 30 H 1.09005 * 109.47160 * 239.99992 * 2 1 3 31 31 H 1.08998 * 109.47171 * 120.00336 * 2 1 3 32 32 H 1.08991 * 113.62033 * 25.44644 * 8 6 4 33 33 H 1.08998 * 113.61174 * 254.53710 * 8 6 4 34 34 H 1.09007 * 109.46742 * 162.49481 * 11 9 8 35 35 H 1.09005 * 109.47116 * 42.49681 * 11 9 8 36 36 H 1.08008 * 119.98342 * 179.97438 * 19 17 16 37 37 H 1.09004 * 109.46779 * 60.00718 * 21 20 19 38 38 H 0.96709 * 113.99337 * 180.02562 * 22 21 20 39 39 H 1.48506 * 109.99834 * 60.00830 * 23 21 20 40 40 H 1.48502 * 110.00011 * 181.32094 * 23 21 20 41 41 H 1.08002 * 119.95104 * 179.72152 * 24 20 19 42 42 H 1.08003 * 120.01198 * 180.28339 * 25 24 20 43 43 H 1.09004 * 113.61447 * 105.39580 * 26 6 4 44 44 H 1.08991 * 113.61964 * 334.48790 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9209 2.9373 0.0000 7 1 3.4716 3.5809 -0.7562 8 6 3.9859 3.5795 1.3958 9 6 5.3562 4.1442 0.9858 10 9 5.2852 5.3939 0.3611 11 6 6.3979 4.0981 2.1055 12 16 6.0848 5.4458 3.2787 13 8 4.8758 5.2173 3.9895 14 8 6.3536 6.7042 2.6757 15 8 7.1740 5.2940 4.3309 16 6 8.4025 5.7051 3.9186 17 6 8.7959 7.0234 4.1109 18 9 7.9580 7.8992 4.7076 19 6 10.0468 7.4380 3.6905 20 6 10.9042 6.5413 3.0804 21 6 12.2664 6.9955 2.6227 22 8 12.1212 8.0436 1.6624 23 14 13.1705 5.5629 1.8475 24 6 10.5119 5.2302 2.8836 25 6 9.2653 4.8092 3.3058 26 6 5.4584 2.9679 0.0001 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 1.8933 -0.5139 -0.8900 31 1 1.8933 -0.5139 0.8899 32 1 4.0377 2.8546 2.2080 33 1 3.2288 4.3464 1.5592 34 1 7.3947 4.2117 1.6793 35 1 6.3315 3.1418 2.6245 36 1 10.3540 8.4628 3.8389 37 1 12.8334 7.3624 3.4783 38 1 12.9600 8.3851 1.3232 39 1 12.4079 5.0529 0.6798 40 1 14.5274 5.9897 1.4208 41 1 11.1821 4.5331 2.4027 42 1 8.9619 3.7836 3.1555 43 1 5.8897 3.2412 -0.9629 44 1 5.9128 2.0757 0.4306 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_7834718_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:20:59 Heat of formation + Delta-G solvation = -240.605494 kcal Electronic energy + Delta-G solvation = -35661.653927 eV Core-core repulsion = 30311.743357 eV Total energy + Delta-G solvation = -5349.910570 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.092 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -50.13203 -49.19615 -42.25264 -41.82437 -40.03927 -39.41692 -38.36097 -37.74225 -37.47834 -37.23038 -32.95837 -32.67170 -32.24276 -31.91493 -27.45384 -27.32923 -27.00166 -24.64952 -24.03919 -23.63802 -22.34688 -21.77831 -20.94648 -19.80371 -19.26919 -19.12376 -18.80700 -18.71137 -18.30344 -17.92219 -17.67140 -17.62621 -17.26796 -16.88028 -16.67067 -16.37114 -16.25872 -16.14105 -15.96212 -15.46756 -15.43058 -15.15770 -14.73679 -14.67596 -14.38408 -14.31786 -14.24297 -14.14662 -13.95985 -13.81991 -13.80848 -13.36028 -13.30320 -13.20562 -13.15391 -13.01489 -12.98984 -12.84331 -12.61436 -12.58949 -12.51105 -12.01561 -11.94489 -11.57944 -11.55722 -11.41556 -10.85559 -10.38398 -10.09361 -5.18757 -1.34187 -0.43358 -0.29625 0.79466 0.99371 1.03360 1.39095 1.51738 1.74801 1.90278 2.28958 2.51639 2.56427 2.65086 2.69577 2.87848 2.92715 3.04800 3.07321 3.21318 3.38116 3.43225 3.65918 3.69190 3.72856 3.83314 3.89006 3.92524 3.95489 4.05166 4.14513 4.20888 4.24944 4.26161 4.34324 4.49457 4.50079 4.52780 4.54656 4.65279 4.67726 4.77485 4.88127 4.90121 4.99284 5.34652 5.38472 6.19152 6.64017 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.109 4.109 7 H 0.138 0.862 8 C -0.147 4.147 9 C 0.103 3.897 10 F -0.169 7.169 11 C -0.674 4.674 12 S 2.587 3.413 13 O -0.908 6.908 14 O -0.926 6.926 15 O -0.652 6.652 16 C 0.028 3.972 17 C 0.140 3.860 18 F -0.113 7.113 19 C -0.111 4.111 20 C -0.023 4.023 21 C -0.084 4.084 22 O -0.532 6.532 23 Si 0.686 3.314 24 C -0.109 4.109 25 C -0.097 4.097 26 C -0.120 4.120 27 H 0.068 0.932 28 H 0.082 0.918 29 H 0.069 0.931 30 H 0.072 0.928 31 H 0.072 0.928 32 H 0.118 0.882 33 H 0.110 0.890 34 H 0.153 0.847 35 H 0.163 0.837 36 H 0.157 0.843 37 H 0.089 0.911 38 H 0.386 0.614 39 H -0.249 1.249 40 H -0.256 1.256 41 H 0.152 0.848 42 H 0.158 0.842 43 H 0.101 0.899 44 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.423 -4.495 -0.490 7.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.391 6.391 6 C -0.128 4.128 7 H 0.156 0.844 8 C -0.185 4.185 9 C 0.083 3.917 10 F -0.149 7.149 11 C -0.799 4.799 12 S 2.680 3.320 13 O -0.906 6.906 14 O -0.925 6.925 15 O -0.610 6.610 16 C -0.015 4.015 17 C 0.119 3.881 18 F -0.091 7.091 19 C -0.130 4.130 20 C -0.024 4.024 21 C -0.193 4.193 22 O -0.340 6.340 23 Si 0.586 3.414 24 C -0.127 4.127 25 C -0.116 4.116 26 C -0.158 4.158 27 H 0.087 0.913 28 H 0.101 0.899 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.136 0.864 33 H 0.129 0.871 34 H 0.171 0.829 35 H 0.181 0.819 36 H 0.175 0.825 37 H 0.107 0.893 38 H 0.235 0.765 39 H -0.173 1.173 40 H -0.180 1.180 41 H 0.169 0.831 42 H 0.176 0.824 43 H 0.120 0.880 44 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 4.956 -4.699 -0.578 6.854 hybrid contribution 0.126 0.653 -0.734 0.991 sum 5.082 -4.046 -1.312 6.627 Atomic orbital electron populations 1.21829 0.92191 1.03339 1.03798 1.23129 0.95754 0.79588 1.02828 1.86524 1.23997 1.32989 1.83459 1.23202 0.80908 0.91785 0.72270 1.90686 1.60554 1.42711 1.45105 1.22471 0.97186 0.92116 1.01018 0.84391 1.23821 0.96064 1.01967 0.96639 1.21170 0.95344 0.82304 0.92890 1.93019 1.96998 1.41519 1.83358 1.31378 1.09700 1.23980 1.14857 1.05901 0.74817 0.76328 0.74913 1.93678 1.41589 1.86312 1.69064 1.93707 1.82976 1.37718 1.78078 1.85800 1.28383 1.85589 1.61261 1.18075 0.84071 0.92709 1.06638 1.17724 0.89264 0.85519 0.95630 1.91605 1.69976 1.67468 1.80010 1.21056 0.91024 1.02074 0.98806 1.19358 0.94881 0.93007 0.95183 1.24896 0.97755 1.00182 0.96440 1.86596 1.35361 1.52242 1.59821 0.95119 0.78469 0.82285 0.85565 1.20922 0.95653 0.95658 1.00480 1.21205 0.93479 0.99758 0.97205 1.23590 0.93796 0.97654 1.00808 0.91308 0.89921 0.91241 0.90988 0.90968 0.86402 0.87116 0.82896 0.81920 0.82521 0.89337 0.76519 1.17346 1.18033 0.83091 0.82430 0.87996 0.85997 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.35 -0.49 10.22 -39.26 -0.40 -0.89 16 4 C 0.48 0.65 7.49 36.01 0.27 0.92 16 5 O -0.50 -1.81 15.65 -18.75 -0.29 -2.10 16 6 C -0.11 0.09 4.23 -90.96 -0.39 -0.29 16 7 H 0.14 -0.30 8.14 -51.93 -0.42 -0.72 16 8 C -0.15 0.11 6.90 -25.92 -0.18 -0.06 16 9 C 0.10 -0.05 1.57 -89.78 -0.14 -0.19 16 10 F -0.17 -0.35 16.51 2.25 0.04 -0.31 16 11 C -0.67 1.33 5.12 37.16 0.19 1.52 16 12 S 2.59 6.88 4.92 -107.50 -0.53 6.35 16 13 O -0.91 -4.69 17.96 -67.03 -1.20 -5.90 16 14 O -0.93 -5.20 15.50 -67.04 -1.04 -6.24 16 15 O -0.65 -1.41 9.92 -51.91 -0.51 -1.93 16 16 C 0.03 0.04 4.80 -39.18 -0.19 -0.15 16 17 C 0.14 0.38 6.48 -39.30 -0.25 0.12 16 18 F -0.11 -0.55 16.73 2.25 0.04 -0.51 16 19 C -0.11 -0.05 9.58 -39.54 -0.38 -0.43 16 20 C -0.02 0.03 5.42 -104.61 -0.57 -0.54 16 21 C -0.08 0.24 2.81 36.01 0.10 0.34 16 22 O -0.53 0.61 12.74 -35.23 -0.45 0.16 16 23 Si 0.69 -2.57 29.78 -169.99 -5.06 -7.63 16 24 C -0.11 0.31 8.66 -39.59 -0.34 -0.04 16 25 C -0.10 0.22 8.46 -39.45 -0.33 -0.11 16 26 C -0.12 0.20 6.86 -25.90 -0.18 0.02 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 31 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 32 H 0.12 -0.23 7.99 -51.93 -0.41 -0.65 16 33 H 0.11 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.15 -0.67 6.60 -51.92 -0.34 -1.01 16 35 H 0.16 -0.87 8.05 -51.92 -0.42 -1.29 16 36 H 0.16 -0.11 8.06 -52.48 -0.42 -0.54 16 37 H 0.09 -0.42 7.96 -51.93 -0.41 -0.84 16 38 H 0.39 -1.94 8.74 45.56 0.40 -1.55 16 39 H -0.25 0.24 7.11 56.52 0.40 0.64 16 40 H -0.26 0.34 7.11 56.52 0.40 0.74 16 41 H 0.15 -0.85 4.87 -52.49 -0.26 -1.11 16 42 H 0.16 -0.98 7.50 -52.48 -0.39 -1.38 16 43 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 44 H 0.12 -0.27 7.40 -51.93 -0.38 -0.66 16 LS Contribution 391.32 15.07 5.90 5.90 Total: 0.00 -12.76 391.32 -10.52 -23.28 By element: Atomic # 1 Polarization: -6.94 SS G_CDS: -5.23 Total: -12.17 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: -1.78 Total: 1.99 kcal Atomic # 8 Polarization: -13.00 SS G_CDS: -3.90 Total: -16.90 kcal Atomic # 9 Polarization: -0.89 SS G_CDS: 0.07 Total: -0.82 kcal Atomic # 14 Polarization: -2.57 SS G_CDS: -5.06 Total: -7.63 kcal Atomic # 16 Polarization: 6.88 SS G_CDS: -0.53 Total: 6.35 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -12.76 -10.52 -23.28 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_7834718_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -217.326 kcal (2) G-P(sol) polarization free energy of solvation -12.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -230.084 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.522 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.279 kcal (6) G-S(sol) free energy of system = (1) + (5) -240.605 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds