Wall clock time and date at job start Mon Mar 8 2021 13:22:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45204 * 109.46952 * 2 1 4 4 C 1.34225 * 116.99704 * 180.02562 * 3 2 1 5 5 O 1.20823 * 120.00046 * 0.02562 * 4 3 2 6 6 C 1.50704 * 120.00109 * 180.02562 * 4 3 2 7 7 H 1.09001 * 112.85019 * 48.79928 * 6 4 3 8 8 C 1.53778 * 113.61828 * 180.02562 * 6 4 3 9 9 C 1.53775 * 87.08106 * 139.97590 * 8 6 4 10 10 F 1.39912 * 113.61122 * 89.20428 * 9 8 6 11 11 C 1.52998 * 113.61844 * 220.01809 * 9 8 6 12 12 S 1.81395 * 109.47607 * 180.02562 * 11 9 8 13 13 O 1.42106 * 110.54252 * 68.37161 * 12 11 9 14 14 O 1.42097 * 110.54000 * 291.62842 * 12 11 9 15 15 O 1.52196 * 104.45322 * 180.02562 * 12 11 9 16 16 C 1.35887 * 113.99956 * 75.77384 * 15 12 11 17 17 C 1.39811 * 119.56755 * 275.30803 * 16 15 12 18 18 C 1.36014 * 120.92931 * 180.28559 * 17 16 15 19 19 C 1.40556 * 119.73291 * 359.74075 * 18 17 16 20 20 C 1.40531 * 121.22168 * 180.02562 * 19 18 17 21 21 C 1.36100 * 119.67111 * 180.02562 * 20 19 18 22 22 C 1.39382 * 120.99628 * 359.97438 * 21 20 19 23 23 C 1.36091 * 120.98512 * 359.97438 * 22 21 20 24 24 C 1.40579 * 119.66003 * 0.02562 * 23 22 21 25 25 C 1.36596 * 119.56471 * 95.07949 * 16 15 12 26 26 C 1.50707 * 120.19227 * 359.97438 * 25 16 15 27 27 O 1.42891 * 109.47173 * 117.29244 * 26 25 16 28 28 Si 1.86298 * 109.46965 * 237.29225 * 26 25 16 29 29 C 1.53779 * 87.08406 * 334.56818 * 9 8 6 30 30 H 1.08998 * 109.46981 * 59.99598 * 1 2 3 31 31 H 1.09002 * 109.46823 * 179.97438 * 1 2 3 32 32 H 1.09006 * 109.46931 * 299.99663 * 1 2 3 33 33 H 1.09002 * 109.46541 * 240.00977 * 2 1 3 34 34 H 1.08993 * 109.47098 * 120.00852 * 2 1 3 35 35 H 1.09009 * 113.61170 * 25.43011 * 8 6 4 36 36 H 1.09000 * 113.61501 * 254.53047 * 8 6 4 37 37 H 1.08998 * 109.46830 * 59.99977 * 11 9 8 38 38 H 1.09004 * 109.47133 * 300.00321 * 11 9 8 39 39 H 1.08001 * 119.53617 * 0.02722 * 17 16 15 40 40 H 1.08001 * 120.13450 * 179.77271 * 18 17 16 41 41 H 1.07994 * 120.16726 * 0.05016 * 20 19 18 42 42 H 1.07992 * 119.50533 * 180.02562 * 21 20 19 43 43 H 1.08004 * 119.51027 * 180.02562 * 22 21 20 44 44 H 1.07998 * 120.16516 * 180.02562 * 23 22 21 45 45 H 1.08995 * 109.46771 * 357.29104 * 26 25 16 46 46 H 0.96706 * 113.99794 * 294.65094 * 27 26 25 47 47 H 1.48503 * 110.00422 * 65.00374 * 28 26 25 48 48 H 1.48499 * 109.99816 * 186.32288 * 28 26 25 49 49 H 1.09003 * 113.61060 * 139.97634 * 29 9 8 50 50 H 1.08999 * 113.61197 * 270.87925 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9208 2.9374 0.0000 7 1 3.4716 3.5810 0.7564 8 6 5.4583 2.9682 -0.0013 9 6 5.3556 4.1432 -0.9880 10 9 5.2848 5.3938 -0.3647 11 6 6.3967 4.0958 -2.1081 12 16 6.1753 5.5268 -3.2006 13 8 6.5215 6.7282 -2.5251 14 8 4.9570 5.4181 -3.9239 15 8 7.2559 5.3665 -4.2603 16 6 6.9812 4.4145 -5.1902 17 6 7.2952 3.0785 -4.9233 18 6 7.0377 2.1040 -5.8365 19 6 6.4427 2.4394 -7.0649 20 6 6.1623 1.4577 -8.0307 21 6 5.5860 1.8179 -9.2098 22 6 5.2676 3.1484 -9.4763 23 6 5.5233 4.1261 -8.5648 24 6 6.1179 3.7927 -7.3354 25 6 6.3976 4.7748 -6.3715 26 6 6.0603 6.2187 -6.6409 27 8 6.8112 6.6815 -7.7651 28 14 4.2396 6.3737 -7.0038 29 6 3.9851 3.5779 -1.3966 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8901 33 1 1.8933 -0.5137 -0.8901 34 1 1.8934 -0.5139 0.8898 35 1 5.9124 2.0753 -0.4313 36 1 5.8904 3.2425 0.9610 37 1 6.2716 3.1774 -2.6818 38 1 7.3970 4.1206 -1.6757 39 1 7.7525 2.8172 -3.9805 40 1 7.2889 1.0765 -5.6184 41 1 6.4026 0.4227 -7.8380 42 1 5.3713 1.0613 -9.9499 43 1 4.8103 3.4074 -10.4199 44 1 5.2707 5.1528 -8.7849 45 1 6.3088 6.8191 -5.7659 46 1 7.7665 6.7066 -7.6166 47 1 3.4490 6.0100 -5.8005 48 1 3.9212 7.7633 -7.4198 49 1 3.2279 4.3447 -1.5606 50 1 4.0365 2.8519 -2.2080 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79478_16464788.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:22:57 Heat of formation + Delta-G solvation = -178.695590 kcal Electronic energy + Delta-G solvation = -41130.321559 eV Core-core repulsion = 35712.333539 eV Total energy + Delta-G solvation = -5417.988020 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.117 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -49.24805 -42.79297 -41.85271 -40.86184 -39.44939 -38.40112 -38.05338 -37.50643 -37.33103 -36.97395 -34.08727 -32.93468 -32.22448 -31.24472 -30.74460 -27.48163 -27.15763 -27.01026 -24.90847 -24.60089 -24.01332 -22.50010 -22.29212 -21.81387 -20.98204 -19.91326 -19.48595 -19.16849 -18.87499 -18.60893 -18.07361 -17.80789 -17.67704 -17.50653 -17.23038 -16.93512 -16.40822 -16.30471 -16.23611 -15.98899 -15.80954 -15.59077 -15.42678 -14.95347 -14.76694 -14.73420 -14.63902 -14.48077 -14.35796 -14.16574 -13.92771 -13.84090 -13.81455 -13.78867 -13.43426 -13.35999 -13.28758 -13.18220 -13.04145 -13.02185 -12.64530 -12.56733 -12.49214 -12.45982 -12.33344 -12.00139 -11.87991 -11.67811 -11.60342 -11.53683 -11.42656 -11.22195 -10.88749 -9.86207 -9.14002 -4.78972 -1.33788 -0.75300 -0.34438 0.72433 0.83583 1.00729 1.35164 1.48992 1.56966 1.93189 2.15220 2.28082 2.47732 2.59082 2.65396 2.75496 2.83020 3.02628 3.12067 3.14657 3.38396 3.41521 3.51303 3.62184 3.67674 3.73238 3.76671 3.85851 3.87153 3.90220 3.92664 4.03036 4.12413 4.14463 4.14961 4.18136 4.22081 4.23503 4.31783 4.46780 4.50933 4.52828 4.64759 4.64990 4.72412 4.74678 4.80629 4.85593 4.92962 4.96489 5.02884 5.35049 5.35651 5.39435 5.45297 5.75727 6.41327 6.61393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.110 4.110 7 H 0.138 0.862 8 C -0.121 4.121 9 C 0.102 3.898 10 F -0.171 7.171 11 C -0.673 4.673 12 S 2.582 3.418 13 O -0.907 6.907 14 O -0.932 6.932 15 O -0.660 6.660 16 C 0.070 3.930 17 C -0.151 4.151 18 C -0.068 4.068 19 C -0.045 4.045 20 C -0.105 4.105 21 C -0.100 4.100 22 C -0.101 4.101 23 C -0.090 4.090 24 C -0.027 4.027 25 C -0.060 4.060 26 C -0.085 4.085 27 O -0.528 6.528 28 Si 0.711 3.289 29 C -0.143 4.143 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.068 0.932 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.121 0.879 36 H 0.102 0.898 37 H 0.158 0.842 38 H 0.157 0.843 39 H 0.142 0.858 40 H 0.147 0.853 41 H 0.135 0.865 42 H 0.131 0.869 43 H 0.135 0.865 44 H 0.145 0.855 45 H 0.068 0.932 46 H 0.370 0.630 47 H -0.208 1.208 48 H -0.245 1.245 49 H 0.110 0.890 50 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.421 -7.498 -3.174 8.265 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.390 6.390 6 C -0.129 4.129 7 H 0.156 0.844 8 C -0.159 4.159 9 C 0.082 3.918 10 F -0.151 7.151 11 C -0.797 4.797 12 S 2.676 3.324 13 O -0.905 6.905 14 O -0.931 6.931 15 O -0.619 6.619 16 C 0.029 3.971 17 C -0.170 4.170 18 C -0.086 4.086 19 C -0.045 4.045 20 C -0.123 4.123 21 C -0.118 4.118 22 C -0.119 4.119 23 C -0.107 4.107 24 C -0.027 4.027 25 C -0.064 4.064 26 C -0.192 4.192 27 O -0.334 6.334 28 Si 0.605 3.395 29 C -0.180 4.180 30 H 0.087 0.913 31 H 0.101 0.899 32 H 0.087 0.913 33 H 0.090 0.910 34 H 0.090 0.910 35 H 0.140 0.860 36 H 0.120 0.880 37 H 0.176 0.824 38 H 0.175 0.825 39 H 0.159 0.841 40 H 0.165 0.835 41 H 0.153 0.847 42 H 0.149 0.851 43 H 0.153 0.847 44 H 0.162 0.838 45 H 0.086 0.914 46 H 0.217 0.783 47 H -0.131 1.131 48 H -0.170 1.170 49 H 0.128 0.872 50 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -2.622 -6.606 -3.411 7.884 hybrid contribution 2.063 -0.123 1.829 2.760 sum -0.559 -6.730 -1.581 6.935 Atomic orbital electron populations 1.21833 0.92183 1.03341 1.03796 1.23129 0.95755 0.79586 1.02820 1.86524 1.23990 1.32987 1.83465 1.23196 0.80907 0.91775 0.72277 1.90685 1.60548 1.42706 1.45094 1.22483 0.97166 0.92148 1.01066 0.84396 1.23586 0.93819 0.97670 1.00818 1.21188 0.95504 0.82209 0.92876 1.93020 1.97024 1.41549 1.83505 1.31387 1.09589 1.24935 1.13812 1.06140 0.74197 0.76700 0.75404 1.93696 1.82237 1.40262 1.74335 1.93704 1.45704 1.86752 1.66900 1.85765 1.67192 1.60590 1.48393 1.17477 1.04637 0.85447 0.89533 1.20953 1.03125 0.90483 1.02413 1.20988 0.96175 0.99654 0.91771 1.18185 0.98700 0.92722 0.94920 1.21083 0.98938 0.98914 0.93347 1.21070 0.97071 0.96599 0.97088 1.21047 0.98569 0.92532 0.99729 1.20978 0.97307 1.00206 0.92217 1.17622 0.99185 0.91478 0.94428 1.20255 0.95985 0.97376 0.92775 1.25484 1.11397 0.89729 0.92613 1.86754 1.22586 1.87600 1.36420 0.94101 0.72079 0.85286 0.88005 1.23773 0.95971 1.01800 0.96474 0.91255 0.89917 0.91296 0.90987 0.90982 0.86028 0.87951 0.82447 0.82536 0.84060 0.83526 0.84746 0.85071 0.84682 0.83759 0.91403 0.78265 1.13056 1.16950 0.87150 0.86563 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.32 10.29 37.16 0.38 0.70 16 2 C 0.06 -0.02 6.19 37.16 0.23 0.21 16 3 O -0.35 -0.39 10.22 -39.25 -0.40 -0.79 16 4 C 0.48 0.55 7.48 36.01 0.27 0.82 16 5 O -0.50 -1.69 15.65 -18.75 -0.29 -1.98 16 6 C -0.11 0.10 4.24 -90.96 -0.39 -0.29 16 7 H 0.14 -0.30 8.14 -51.93 -0.42 -0.72 16 8 C -0.12 0.17 6.86 -25.92 -0.18 0.00 16 9 C 0.10 -0.02 1.62 -89.81 -0.15 -0.17 16 10 F -0.17 -0.41 16.28 2.25 0.04 -0.38 16 11 C -0.67 0.96 5.01 37.16 0.19 1.14 16 12 S 2.58 7.24 4.63 -107.50 -0.50 6.75 16 13 O -0.91 -5.94 17.54 -67.03 -1.18 -7.12 16 14 O -0.93 -3.66 13.79 -67.04 -0.92 -4.58 16 15 O -0.66 -1.53 8.80 -51.71 -0.46 -1.99 16 16 C 0.07 0.10 4.67 -39.59 -0.18 -0.08 16 17 C -0.15 0.20 8.32 -39.79 -0.33 -0.13 16 18 C -0.07 0.14 9.76 -39.51 -0.39 -0.25 16 19 C -0.04 0.03 5.74 -106.81 -0.61 -0.58 16 20 C -0.10 0.23 9.77 -39.49 -0.39 -0.15 16 21 C -0.10 0.26 9.95 -39.92 -0.40 -0.14 16 22 C -0.10 0.21 9.95 -39.93 -0.40 -0.18 16 23 C -0.09 0.04 7.71 -39.47 -0.30 -0.26 16 24 C -0.03 -0.02 5.40 -106.84 -0.58 -0.60 16 25 C -0.06 -0.12 4.07 -104.39 -0.42 -0.55 16 26 C -0.09 -0.24 2.14 36.01 0.08 -0.16 16 27 O -0.53 -0.86 11.58 -35.23 -0.41 -1.27 16 28 Si 0.71 1.82 27.75 -169.99 -4.72 -2.90 16 29 C -0.14 0.14 7.08 -25.92 -0.18 -0.04 16 30 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 31 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 32 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 34 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 35 H 0.12 -0.25 7.39 -51.92 -0.38 -0.63 16 36 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 37 H 0.16 -0.67 5.94 -51.93 -0.31 -0.98 16 38 H 0.16 -0.58 8.14 -51.92 -0.42 -1.01 16 39 H 0.14 -0.62 6.86 -52.49 -0.36 -0.98 16 40 H 0.15 -0.73 8.06 -52.49 -0.42 -1.16 16 41 H 0.13 -0.60 8.06 -52.49 -0.42 -1.02 16 42 H 0.13 -0.60 8.06 -52.49 -0.42 -1.03 16 43 H 0.14 -0.58 8.06 -52.48 -0.42 -1.01 16 44 H 0.15 -0.15 4.25 -52.49 -0.22 -0.37 16 45 H 0.07 0.25 6.44 -51.93 -0.33 -0.08 16 46 H 0.37 -0.40 9.11 45.56 0.42 0.02 16 47 H -0.21 -0.96 6.42 56.52 0.36 -0.60 16 48 H -0.25 -1.09 7.11 56.52 0.40 -0.69 16 49 H 0.11 -0.13 8.14 -51.93 -0.42 -0.56 16 50 H 0.12 -0.27 7.91 -51.93 -0.41 -0.68 16 LS Contribution 419.43 15.07 6.32 6.32 Total: 0.00 -10.92 419.43 -12.60 -23.52 By element: Atomic # 1 Polarization: -8.52 SS G_CDS: -6.34 Total: -14.86 kcal Atomic # 6 Polarization: 3.03 SS G_CDS: -3.75 Total: -0.72 kcal Atomic # 8 Polarization: -14.07 SS G_CDS: -3.66 Total: -17.73 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.38 kcal Atomic # 14 Polarization: 1.82 SS G_CDS: -4.72 Total: -2.90 kcal Atomic # 16 Polarization: 7.24 SS G_CDS: -0.50 Total: 6.75 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -10.92 -12.60 -23.52 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79478_16464788.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -155.175 kcal (2) G-P(sol) polarization free energy of solvation -10.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -166.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.521 kcal (6) G-S(sol) free energy of system = (1) + (5) -178.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds