Wall clock time and date at job start Mon Mar 8 2021 12:33:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45199 * 109.47063 * 2 1 4 4 C 1.34227 * 116.99889 * 180.02562 * 3 2 1 5 5 O 1.20827 * 120.00037 * 359.97438 * 4 3 2 6 6 C 1.50705 * 119.99942 * 179.97438 * 4 3 2 7 7 H 1.09000 * 112.90765 * 311.24979 * 6 4 3 8 8 C 1.53780 * 113.61119 * 82.50137 * 6 4 3 9 9 C 1.53782 * 87.08171 * 139.98195 * 8 6 4 10 10 F 1.39897 * 113.69322 * 220.00688 * 9 8 6 11 11 C 1.53001 * 113.61527 * 89.11030 * 9 8 6 12 12 S 1.81404 * 109.46917 * 82.50598 * 11 9 8 13 13 O 1.42095 * 110.54250 * 68.37355 * 12 11 9 14 14 O 1.42108 * 110.54286 * 291.62495 * 12 11 9 15 15 O 1.52192 * 104.44932 * 180.02562 * 12 11 9 16 16 C 1.35909 * 114.00499 * 75.79312 * 15 12 11 17 17 C 1.38711 * 120.04764 * 95.23932 * 16 15 12 18 18 C 1.50697 * 120.02268 * 0.02562 * 17 16 15 19 19 O 1.42895 * 109.47278 * 196.18166 * 18 17 16 20 20 Si 1.86306 * 109.47078 * 76.17906 * 18 17 16 21 21 C 1.38165 * 119.95218 * 180.27885 * 17 16 15 22 22 C 1.38325 * 120.04830 * 359.47396 * 21 17 16 23 23 Br 1.89093 * 119.95430 * 180.27612 * 22 21 17 24 24 C 1.38367 * 120.08847 * 0.54838 * 22 21 17 25 25 C 1.38116 * 120.04599 * 359.70473 * 24 22 21 26 26 C 1.53772 * 113.61418 * 179.97438 * 6 4 3 27 27 H 1.08998 * 109.47335 * 60.00682 * 1 2 3 28 28 H 1.09000 * 109.46890 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47384 * 299.99959 * 1 2 3 30 30 H 1.08995 * 109.47273 * 239.99567 * 2 1 3 31 31 H 1.09006 * 109.46994 * 119.99369 * 2 1 3 32 32 H 1.08998 * 113.61804 * 25.43364 * 8 6 4 33 33 H 1.09001 * 113.61366 * 254.52495 * 8 6 4 34 34 H 1.08999 * 109.46980 * 322.50731 * 11 9 8 35 35 H 1.08997 * 109.47156 * 202.50142 * 11 9 8 36 36 H 1.09001 * 109.47198 * 316.18202 * 18 17 16 37 37 H 0.96693 * 114.00544 * 56.12047 * 19 18 17 38 38 H 1.48501 * 109.99967 * 300.00359 * 20 18 17 39 39 H 1.48493 * 109.99850 * 61.31980 * 20 18 17 40 40 H 1.08004 * 119.97480 * 179.75143 * 21 17 16 41 41 H 1.07994 * 119.97547 * 179.72385 * 24 22 21 42 42 H 1.08000 * 120.02464 * 179.97438 * 25 24 22 43 43 H 1.09003 * 113.61608 * 105.47428 * 26 6 4 44 44 H 1.09004 * 113.61845 * 334.56733 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 -0.0012 7 1 3.4708 3.5823 -0.7561 8 6 3.9867 3.5773 1.3956 9 6 5.3567 4.1428 0.9857 10 9 6.3112 4.1000 2.0076 11 6 5.2764 5.5105 0.3046 12 16 5.1608 6.8085 1.5666 13 8 6.3790 6.9095 2.2911 14 8 3.9114 6.7392 2.2402 15 8 5.0870 8.1047 0.7726 16 6 3.8760 8.3341 0.1998 17 6 2.9404 9.1271 0.8477 18 6 3.2659 9.7357 2.1874 19 8 2.0607 10.1766 2.8158 20 14 4.4089 11.1874 1.9487 21 6 1.7077 9.3543 0.2664 22 6 1.4105 8.8006 -0.9659 23 35 -0.2744 9.1197 -1.7627 24 6 2.3423 8.0089 -1.6136 25 6 3.5737 7.7750 -1.0335 26 6 5.4581 2.9681 -0.0011 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 1.8933 -0.5139 -0.8899 31 1 1.8933 -0.5138 0.8901 32 1 4.0391 2.8510 2.2067 33 1 3.2297 4.3440 1.5609 34 1 4.3948 5.5464 -0.3354 35 1 6.1702 5.6690 -0.2987 36 1 3.7520 8.9902 2.8166 37 1 1.3940 9.4837 2.9179 38 1 5.6662 10.7420 1.2958 39 1 3.7457 12.2249 1.1187 40 1 0.9774 9.9684 0.7724 41 1 2.1066 7.5739 -2.5735 42 1 4.3006 7.1567 -1.5392 43 1 5.8894 3.2428 -0.9637 44 1 5.9127 2.0753 0.4283 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79519_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:33:15 Heat of formation + Delta-G solvation = -199.222564 kcal Electronic energy + Delta-G solvation = -36214.255675 eV Core-core repulsion = 30995.775576 eV Total energy + Delta-G solvation = -5218.480099 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -49.15411 -42.82286 -41.96844 -39.90763 -39.74782 -38.53184 -37.92337 -37.59126 -37.40335 -33.56418 -33.14099 -32.86057 -31.76415 -30.47532 -27.59917 -27.44538 -27.26092 -24.86095 -24.13501 -23.32953 -22.49720 -21.91996 -20.66943 -19.99346 -19.58079 -19.14185 -18.90526 -18.44891 -18.05648 -17.77753 -17.41353 -17.24649 -16.96077 -16.92652 -16.43057 -16.22981 -15.95616 -15.73319 -15.56188 -15.46804 -14.99214 -14.79242 -14.63428 -14.59825 -14.36431 -14.10434 -13.97764 -13.88886 -13.86480 -13.53944 -13.44981 -13.40411 -13.20218 -13.09071 -12.94582 -12.87393 -12.70620 -12.60997 -12.33679 -12.24669 -12.08312 -11.86174 -11.68333 -11.63564 -11.60086 -11.53861 -11.47566 -10.40546 -10.05267 -4.97166 -1.52520 -0.61029 -0.42764 0.18385 0.63771 0.96304 1.20895 1.42970 1.64165 1.84904 1.92294 2.07836 2.33596 2.49699 2.57139 2.72474 2.91924 2.92524 3.01108 3.05704 3.26717 3.40155 3.53549 3.58764 3.65527 3.71013 3.71316 3.86129 3.88843 3.90293 4.06315 4.08117 4.18845 4.19889 4.24970 4.29884 4.32831 4.44594 4.45790 4.60105 4.62782 4.65908 4.71639 4.79041 4.93209 5.06591 5.31963 6.33769 6.57170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.354 6.354 4 C 0.475 3.525 5 O -0.499 6.499 6 C -0.108 4.108 7 H 0.134 0.866 8 C -0.147 4.147 9 C 0.102 3.898 10 F -0.178 7.178 11 C -0.671 4.671 12 S 2.589 3.411 13 O -0.896 6.896 14 O -0.933 6.933 15 O -0.658 6.658 16 C 0.077 3.923 17 C -0.078 4.078 18 C -0.087 4.087 19 O -0.528 6.528 20 Si 0.753 3.247 21 C -0.065 4.065 22 C -0.072 4.072 23 Br -0.020 7.020 24 C -0.073 4.073 25 C -0.128 4.128 26 C -0.121 4.121 27 H 0.068 0.932 28 H 0.082 0.918 29 H 0.068 0.932 30 H 0.072 0.928 31 H 0.072 0.928 32 H 0.117 0.883 33 H 0.111 0.889 34 H 0.157 0.843 35 H 0.162 0.838 36 H 0.087 0.913 37 H 0.372 0.628 38 H -0.234 1.234 39 H -0.246 1.246 40 H 0.160 0.840 41 H 0.155 0.845 42 H 0.154 0.846 43 H 0.100 0.900 44 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.806 -0.397 -3.642 5.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.317 3.683 5 O -0.386 6.386 6 C -0.127 4.127 7 H 0.152 0.848 8 C -0.184 4.184 9 C 0.083 3.917 10 F -0.158 7.158 11 C -0.796 4.796 12 S 2.682 3.318 13 O -0.894 6.894 14 O -0.931 6.931 15 O -0.617 6.617 16 C 0.035 3.965 17 C -0.082 4.082 18 C -0.194 4.194 19 O -0.334 6.334 20 Si 0.647 3.353 21 C -0.085 4.085 22 C -0.153 4.153 23 Br 0.066 6.934 24 C -0.093 4.093 25 C -0.149 4.149 26 C -0.159 4.159 27 H 0.087 0.913 28 H 0.101 0.899 29 H 0.087 0.913 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.136 0.864 33 H 0.129 0.871 34 H 0.175 0.825 35 H 0.180 0.820 36 H 0.105 0.895 37 H 0.220 0.780 38 H -0.157 1.157 39 H -0.170 1.170 40 H 0.178 0.822 41 H 0.172 0.828 42 H 0.171 0.829 43 H 0.118 0.882 44 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -3.327 0.868 -3.869 5.176 hybrid contribution -0.159 -2.178 -1.068 2.431 sum -3.485 -1.310 -4.937 6.184 Atomic orbital electron populations 1.21829 0.92147 1.03394 1.03745 1.23139 0.95741 0.79502 1.02920 1.86504 1.23902 1.33090 1.83553 1.23092 0.80966 0.91705 0.72550 1.90712 1.60527 1.42630 1.44690 1.22276 0.97248 0.92346 1.00830 0.84782 1.23854 0.95726 1.02105 0.96752 1.21520 0.89079 0.93252 0.87889 1.93015 1.65655 1.97189 1.59981 1.31326 1.14349 1.13367 1.20531 1.05875 0.75571 0.74789 0.75580 1.93718 1.46027 1.83251 1.66426 1.93675 1.44095 1.84399 1.70953 1.85816 1.40280 1.61096 1.74480 1.17852 0.80875 1.03337 0.94405 1.20495 0.93101 0.95785 0.98779 1.25510 0.94690 1.09630 0.89595 1.86729 1.25977 1.39825 1.80839 0.93397 0.77221 0.76601 0.88128 1.20995 0.96008 0.98257 0.93239 1.22110 0.94510 1.01643 0.97019 1.96891 1.20289 1.95176 1.81048 1.21079 0.91276 0.96546 1.00365 1.21400 0.98299 1.01832 0.93384 1.23616 0.93568 0.98109 1.00605 0.91325 0.89883 0.91255 0.90948 0.90919 0.86441 0.87076 0.82540 0.82019 0.89533 0.77952 1.15716 1.16996 0.82200 0.82757 0.82852 0.88152 0.85952 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.36 10.29 37.16 0.38 0.75 16 2 C 0.06 -0.04 6.19 37.16 0.23 0.19 16 3 O -0.35 -0.17 10.22 -39.25 -0.40 -0.57 16 4 C 0.47 0.34 7.48 36.01 0.27 0.61 16 5 O -0.50 -1.81 15.65 -18.75 -0.29 -2.11 16 6 C -0.11 0.25 3.91 -90.96 -0.36 -0.11 16 7 H 0.13 -0.72 7.65 -51.93 -0.40 -1.11 16 8 C -0.15 0.24 7.09 -25.92 -0.18 0.06 16 9 C 0.10 -0.10 1.79 -89.82 -0.16 -0.26 16 10 F -0.18 -0.41 16.31 2.25 0.04 -0.37 16 11 C -0.67 2.03 4.93 37.16 0.18 2.21 16 12 S 2.59 2.98 4.69 -107.50 -0.50 2.48 16 13 O -0.90 -4.43 17.54 -67.03 -1.18 -5.61 16 14 O -0.93 -1.75 14.44 -67.04 -0.97 -2.72 16 15 O -0.66 -0.61 8.67 -51.78 -0.45 -1.06 16 16 C 0.08 0.01 4.35 -39.22 -0.17 -0.16 16 17 C -0.08 -0.05 3.97 -104.48 -0.41 -0.47 16 18 C -0.09 -0.09 2.42 36.00 0.09 0.00 16 19 O -0.53 0.00 11.52 -35.23 -0.41 -0.41 16 20 Si 0.75 0.63 32.40 -169.99 -5.51 -4.88 16 21 C -0.07 0.04 8.92 -39.58 -0.35 -0.32 16 22 C -0.07 0.09 6.22 -39.50 -0.25 -0.16 16 23 Br -0.02 0.02 33.70 -68.01 -2.29 -2.27 16 24 C -0.07 0.21 9.78 -39.58 -0.39 -0.18 16 25 C -0.13 0.37 8.45 -39.44 -0.33 0.03 16 26 C -0.12 0.24 6.88 -25.94 -0.18 0.06 16 27 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 28 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 29 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 30 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 32 H 0.12 -0.17 8.09 -51.93 -0.42 -0.59 16 33 H 0.11 -0.30 7.51 -51.93 -0.39 -0.69 16 34 H 0.16 -1.01 5.37 -51.92 -0.28 -1.29 16 35 H 0.16 -0.90 8.14 -51.93 -0.42 -1.32 16 36 H 0.09 0.10 6.09 -51.93 -0.32 -0.22 16 37 H 0.37 -1.06 8.64 45.56 0.39 -0.67 16 38 H -0.23 -0.58 7.11 56.52 0.40 -0.18 16 39 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 40 H 0.16 -0.27 7.06 -52.48 -0.37 -0.64 16 41 H 0.15 -0.82 8.06 -52.49 -0.42 -1.24 16 42 H 0.15 -1.00 6.91 -52.49 -0.36 -1.37 16 43 H 0.10 -0.41 8.10 -51.93 -0.42 -0.83 16 44 H 0.12 -0.06 7.44 -51.93 -0.39 -0.45 16 LS Contribution 401.76 15.07 6.05 6.05 Total: 0.00 -10.18 401.76 -12.64 -22.82 By element: Atomic # 1 Polarization: -8.53 SS G_CDS: -5.10 Total: -13.63 kcal Atomic # 6 Polarization: 3.90 SS G_CDS: -1.63 Total: 2.26 kcal Atomic # 8 Polarization: -8.77 SS G_CDS: -3.69 Total: -12.47 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.37 kcal Atomic # 14 Polarization: 0.63 SS G_CDS: -5.51 Total: -4.88 kcal Atomic # 16 Polarization: 2.98 SS G_CDS: -0.50 Total: 2.48 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -10.18 -12.64 -22.82 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79519_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -176.405 kcal (2) G-P(sol) polarization free energy of solvation -10.176 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.581 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.641 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.817 kcal (6) G-S(sol) free energy of system = (1) + (5) -199.223 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds