Wall clock time and date at job start Mon Mar 8 2021 12:33:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45199 * 109.47063 * 2 1 4 4 C 1.34227 * 116.99889 * 180.02562 * 3 2 1 5 5 O 1.20827 * 120.00037 * 359.97438 * 4 3 2 6 6 C 1.50705 * 119.99942 * 179.97438 * 4 3 2 7 7 H 1.09000 * 112.90765 * 311.24979 * 6 4 3 8 8 C 1.53780 * 113.61119 * 82.50137 * 6 4 3 9 9 C 1.53782 * 87.08171 * 139.98195 * 8 6 4 10 10 F 1.39897 * 113.69322 * 220.00688 * 9 8 6 11 11 C 1.53001 * 113.61527 * 89.11030 * 9 8 6 12 12 S 1.81404 * 109.46917 * 82.50598 * 11 9 8 13 13 O 1.42095 * 110.54250 * 68.37355 * 12 11 9 14 14 O 1.42108 * 110.54286 * 291.62495 * 12 11 9 15 15 O 1.52192 * 104.44932 * 180.02562 * 12 11 9 16 16 C 1.35909 * 114.00499 * 75.79312 * 15 12 11 17 17 C 1.38711 * 120.04764 * 95.23932 * 16 15 12 18 18 C 1.50697 * 120.02268 * 0.02562 * 17 16 15 19 19 O 1.42895 * 109.47278 * 196.18166 * 18 17 16 20 20 Si 1.86306 * 109.47078 * 76.17906 * 18 17 16 21 21 C 1.38165 * 119.95218 * 180.27885 * 17 16 15 22 22 C 1.38325 * 120.04830 * 359.47396 * 21 17 16 23 23 Br 1.89093 * 119.95430 * 180.27612 * 22 21 17 24 24 C 1.38367 * 120.08847 * 0.54838 * 22 21 17 25 25 C 1.38116 * 120.04599 * 359.70473 * 24 22 21 26 26 C 1.53772 * 113.61418 * 179.97438 * 6 4 3 27 27 H 1.08998 * 109.47335 * 60.00682 * 1 2 3 28 28 H 1.09000 * 109.46890 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47384 * 299.99959 * 1 2 3 30 30 H 1.08995 * 109.47273 * 239.99567 * 2 1 3 31 31 H 1.09006 * 109.46994 * 119.99369 * 2 1 3 32 32 H 1.08998 * 113.61804 * 25.43364 * 8 6 4 33 33 H 1.09001 * 113.61366 * 254.52495 * 8 6 4 34 34 H 1.08999 * 109.46980 * 322.50731 * 11 9 8 35 35 H 1.08997 * 109.47156 * 202.50142 * 11 9 8 36 36 H 1.09001 * 109.47198 * 316.18202 * 18 17 16 37 37 H 0.96693 * 114.00544 * 56.12047 * 19 18 17 38 38 H 1.48501 * 109.99967 * 300.00359 * 20 18 17 39 39 H 1.48493 * 109.99850 * 61.31980 * 20 18 17 40 40 H 1.08004 * 119.97480 * 179.75143 * 21 17 16 41 41 H 1.07994 * 119.97547 * 179.72385 * 24 22 21 42 42 H 1.08000 * 120.02464 * 179.97438 * 25 24 22 43 43 H 1.09003 * 113.61608 * 105.47428 * 26 6 4 44 44 H 1.09004 * 113.61845 * 334.56733 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 -0.0012 7 1 3.4708 3.5823 -0.7561 8 6 3.9867 3.5773 1.3956 9 6 5.3567 4.1428 0.9857 10 9 6.3112 4.1000 2.0076 11 6 5.2764 5.5105 0.3046 12 16 5.1608 6.8085 1.5666 13 8 6.3790 6.9095 2.2911 14 8 3.9114 6.7392 2.2402 15 8 5.0870 8.1047 0.7726 16 6 3.8760 8.3341 0.1998 17 6 2.9404 9.1271 0.8477 18 6 3.2659 9.7357 2.1874 19 8 2.0607 10.1766 2.8158 20 14 4.4089 11.1874 1.9487 21 6 1.7077 9.3543 0.2664 22 6 1.4105 8.8006 -0.9659 23 35 -0.2744 9.1197 -1.7627 24 6 2.3423 8.0089 -1.6136 25 6 3.5737 7.7750 -1.0335 26 6 5.4581 2.9681 -0.0011 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 1.8933 -0.5139 -0.8899 31 1 1.8933 -0.5138 0.8901 32 1 4.0391 2.8510 2.2067 33 1 3.2297 4.3440 1.5609 34 1 4.3948 5.5464 -0.3354 35 1 6.1702 5.6690 -0.2987 36 1 3.7520 8.9902 2.8166 37 1 1.3940 9.4837 2.9179 38 1 5.6662 10.7420 1.2958 39 1 3.7457 12.2249 1.1187 40 1 0.9774 9.9684 0.7724 41 1 2.1066 7.5739 -2.5735 42 1 4.3006 7.1567 -1.5392 43 1 5.8894 3.2428 -0.9637 44 1 5.9127 2.0753 0.4283 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_79519_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:33:14 Heat of formation + Delta-G solvation = -198.293526 kcal Electronic energy + Delta-G solvation = -36214.215389 eV Core-core repulsion = 30995.775576 eV Total energy + Delta-G solvation = -5218.439813 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -49.16633 -42.73675 -41.95267 -39.80765 -39.64255 -38.61397 -37.88199 -37.64511 -37.47257 -33.43752 -32.98538 -32.73916 -31.59111 -30.33787 -27.47450 -27.30955 -27.14926 -24.73021 -24.00992 -23.23512 -22.45628 -21.84478 -20.54275 -19.95756 -19.51856 -19.11890 -18.85538 -18.43433 -18.02548 -17.73333 -17.33211 -17.13250 -16.87872 -16.83736 -16.39141 -16.16852 -15.92987 -15.60836 -15.50079 -15.32486 -14.91879 -14.73209 -14.57048 -14.50700 -14.27361 -14.17860 -13.95594 -13.72194 -13.70863 -13.61148 -13.49921 -13.32491 -13.08063 -13.00182 -12.80670 -12.72763 -12.54450 -12.50129 -12.37601 -12.24677 -12.05550 -11.79444 -11.60107 -11.56543 -11.53942 -11.47484 -11.39627 -10.26747 -9.93935 -5.07048 -1.48501 -0.49526 -0.24776 0.33115 0.69278 0.95892 1.17027 1.51681 1.52912 1.75850 2.00690 2.15777 2.47765 2.64760 2.67172 2.89141 3.04703 3.10227 3.18636 3.23387 3.44368 3.54096 3.66717 3.80754 3.82436 3.90693 3.95057 4.01010 4.01385 4.12776 4.17057 4.24636 4.30041 4.36923 4.40972 4.46791 4.54868 4.65449 4.70165 4.77606 4.80868 4.82191 4.88127 4.96809 5.11299 5.25628 5.38427 6.47878 6.56848 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.356 6.356 4 C 0.472 3.528 5 O -0.535 6.535 6 C -0.098 4.098 7 H 0.178 0.822 8 C -0.155 4.155 9 C 0.089 3.911 10 F -0.203 7.203 11 C -0.651 4.651 12 S 2.578 3.422 13 O -0.951 6.951 14 O -0.951 6.951 15 O -0.664 6.664 16 C 0.055 3.945 17 C -0.100 4.100 18 C -0.092 4.092 19 O -0.534 6.534 20 Si 0.791 3.209 21 C -0.073 4.073 22 C -0.079 4.079 23 Br -0.025 7.025 24 C -0.064 4.064 25 C -0.118 4.118 26 C -0.119 4.119 27 H 0.072 0.928 28 H 0.094 0.906 29 H 0.067 0.933 30 H 0.071 0.929 31 H 0.065 0.935 32 H 0.104 0.896 33 H 0.122 0.878 34 H 0.200 0.800 35 H 0.196 0.804 36 H 0.079 0.921 37 H 0.384 0.616 38 H -0.259 1.259 39 H -0.271 1.271 40 H 0.162 0.838 41 H 0.186 0.814 42 H 0.198 0.802 43 H 0.131 0.869 44 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.709 -0.949 -6.341 7.955 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.272 6.272 4 C 0.316 3.684 5 O -0.425 6.425 6 C -0.117 4.117 7 H 0.195 0.805 8 C -0.192 4.192 9 C 0.069 3.931 10 F -0.184 7.184 11 C -0.779 4.779 12 S 2.677 3.323 13 O -0.949 6.949 14 O -0.950 6.950 15 O -0.623 6.623 16 C 0.014 3.986 17 C -0.104 4.104 18 C -0.200 4.200 19 O -0.342 6.342 20 Si 0.688 3.312 21 C -0.092 4.092 22 C -0.160 4.160 23 Br 0.062 6.938 24 C -0.083 4.083 25 C -0.139 4.139 26 C -0.157 4.157 27 H 0.091 0.909 28 H 0.113 0.887 29 H 0.086 0.914 30 H 0.089 0.911 31 H 0.084 0.916 32 H 0.123 0.877 33 H 0.141 0.859 34 H 0.217 0.783 35 H 0.213 0.787 36 H 0.097 0.903 37 H 0.234 0.766 38 H -0.184 1.184 39 H -0.196 1.196 40 H 0.179 0.821 41 H 0.203 0.797 42 H 0.215 0.785 43 H 0.149 0.851 44 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -4.251 0.353 -6.512 7.785 hybrid contribution 0.054 -2.066 -0.295 2.088 sum -4.197 -1.714 -6.807 8.179 Atomic orbital electron populations 1.21830 0.90689 1.04245 1.03845 1.23275 0.96924 0.79234 1.02572 1.86515 1.23923 1.33530 1.83268 1.23743 0.80733 0.92601 0.71284 1.90700 1.61200 1.44124 1.46454 1.22490 0.96981 0.90940 1.01272 0.80508 1.23926 0.95904 1.02289 0.97121 1.21865 0.88712 0.94629 0.87852 1.92970 1.66677 1.97374 1.61352 1.31230 1.18191 1.09365 1.19114 1.05884 0.74334 0.75597 0.76529 1.93654 1.47774 1.84492 1.68988 1.93642 1.44084 1.84889 1.72358 1.85793 1.40696 1.61276 1.74567 1.18261 0.80543 1.04193 0.95649 1.20549 0.94065 0.97022 0.98780 1.25451 0.94987 1.09218 0.90354 1.86676 1.26069 1.40563 1.80844 0.92843 0.75471 0.75443 0.87419 1.21041 0.95717 0.98636 0.93840 1.22260 0.94800 1.02064 0.96890 1.96894 1.20806 1.95283 1.80861 1.21503 0.90529 0.95242 1.01069 1.21885 0.98962 1.01135 0.91871 1.23623 0.93958 0.96649 1.01477 0.90928 0.88707 0.91356 0.91055 0.91617 0.87715 0.85929 0.78300 0.78651 0.90320 0.76605 1.18449 1.19632 0.82073 0.79654 0.78460 0.85055 0.88087 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.80 10.29 71.98 0.74 1.55 16 2 C 0.05 -0.06 6.19 71.98 0.45 0.38 16 3 O -0.36 -0.08 10.22 -51.39 -0.53 -0.60 16 4 C 0.47 0.34 7.48 71.24 0.53 0.88 16 5 O -0.54 -4.12 15.65 21.96 0.34 -3.77 16 6 C -0.10 0.68 3.91 -11.02 -0.04 0.64 16 7 H 0.18 -2.80 7.65 -2.39 -0.02 -2.82 16 8 C -0.15 0.64 7.09 31.12 0.22 0.86 16 9 C 0.09 -0.29 1.79 -10.28 -0.02 -0.31 16 10 F -0.20 -1.11 16.31 44.97 0.73 -0.38 16 11 C -0.65 5.79 4.93 71.98 0.35 6.15 16 12 S 2.58 6.21 4.69 -56.49 -0.26 5.94 16 13 O -0.95 -11.25 17.54 -118.57 -2.08 -13.33 16 14 O -0.95 -4.19 14.44 -118.57 -1.71 -5.90 16 15 O -0.66 -1.18 8.67 -61.62 -0.53 -1.71 16 16 C 0.06 -0.05 4.35 22.51 0.10 0.05 16 17 C -0.10 -0.15 3.97 -19.77 -0.08 -0.23 16 18 C -0.09 -0.32 2.42 71.23 0.17 -0.14 16 19 O -0.53 -0.67 11.52 -148.98 -1.72 -2.38 16 20 Si 0.79 2.84 32.40 68.60 2.22 5.06 16 21 C -0.07 0.09 8.92 22.27 0.20 0.29 16 22 C -0.08 0.32 6.22 22.32 0.14 0.46 16 23 Br -0.02 0.08 33.70 -20.37 -0.69 -0.60 16 24 C -0.06 0.58 9.78 22.27 0.22 0.80 16 25 C -0.12 1.09 8.45 22.36 0.19 1.28 16 26 C -0.12 0.69 6.88 31.11 0.21 0.91 16 27 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 28 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 29 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 30 H 0.07 -0.08 8.13 -2.39 -0.02 -0.10 16 31 H 0.07 -0.01 8.13 -2.38 -0.02 -0.03 16 32 H 0.10 -0.19 8.09 -2.39 -0.02 -0.21 16 33 H 0.12 -0.81 7.51 -2.39 -0.02 -0.83 16 34 H 0.20 -3.61 5.37 -2.39 -0.01 -3.62 16 35 H 0.20 -2.99 8.14 -2.39 -0.02 -3.01 16 36 H 0.08 0.35 6.09 -2.39 -0.01 0.34 16 37 H 0.38 -1.76 8.64 -74.06 -0.64 -2.40 16 38 H -0.26 -1.92 7.11 99.48 0.71 -1.21 16 39 H -0.27 -1.97 7.11 99.48 0.71 -1.27 16 40 H 0.16 -0.44 7.06 -2.91 -0.02 -0.47 16 41 H 0.19 -2.85 8.06 -2.91 -0.02 -2.88 16 42 H 0.20 -3.73 6.91 -2.91 -0.02 -3.75 16 43 H 0.13 -1.59 8.10 -2.39 -0.02 -1.61 16 44 H 0.10 -0.09 7.44 -2.38 -0.02 -0.11 16 Total: 0.00 -29.28 401.76 -0.36 -29.65 By element: Atomic # 1 Polarization: -25.99 SS G_CDS: 0.47 Total: -25.52 kcal Atomic # 6 Polarization: 10.17 SS G_CDS: 3.38 Total: 13.56 kcal Atomic # 8 Polarization: -21.48 SS G_CDS: -6.22 Total: -27.71 kcal Atomic # 9 Polarization: -1.11 SS G_CDS: 0.73 Total: -0.38 kcal Atomic # 14 Polarization: 2.84 SS G_CDS: 2.22 Total: 5.06 kcal Atomic # 16 Polarization: 6.21 SS G_CDS: -0.26 Total: 5.94 kcal Atomic # 35 Polarization: 0.08 SS G_CDS: -0.69 Total: -0.60 kcal Total: -29.28 -0.36 -29.65 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79519_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.647 kcal (2) G-P(sol) polarization free energy of solvation -29.284 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -197.931 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.362 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.646 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.294 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds