Wall clock time and date at job start Mon Mar 8 2021 12:50:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45199 * 109.47100 * 2 1 4 4 C 1.34231 * 116.99676 * 179.97438 * 3 2 1 5 5 O 1.20830 * 120.00317 * 0.02562 * 4 3 2 6 6 C 1.50703 * 120.00159 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.90050 * 48.74520 * 6 4 3 8 8 C 1.53775 * 113.61667 * 180.02562 * 6 4 3 9 9 C 1.53780 * 87.17173 * 139.93804 * 8 6 4 10 10 F 1.39898 * 113.61331 * 89.15787 * 9 8 6 11 11 C 1.53005 * 113.61136 * 220.05733 * 9 8 6 12 12 S 1.81406 * 109.46846 * 180.02562 * 11 9 8 13 13 O 1.42100 * 110.54389 * 291.62950 * 12 11 9 14 14 O 1.42101 * 110.53982 * 68.37790 * 12 11 9 15 15 O 1.52198 * 104.44757 * 180.02562 * 12 11 9 16 16 C 1.35910 * 114.00339 * 74.14057 * 15 12 11 17 17 C 1.38708 * 120.04787 * 262.75217 * 16 15 12 18 18 C 1.50702 * 120.01879 * 359.97438 * 17 16 15 19 19 O 1.42903 * 109.46952 * 253.44283 * 18 17 16 20 20 Si 1.86302 * 109.46862 * 133.44727 * 18 17 16 21 21 C 1.38157 * 119.95448 * 179.97438 * 17 16 15 22 22 C 1.38327 * 120.04569 * 0.02562 * 21 17 16 23 23 Br 1.89101 * 119.95091 * 179.97438 * 22 21 17 24 24 C 1.38357 * 120.09247 * 359.97438 * 22 21 17 25 25 C 1.38121 * 120.04510 * 359.72669 * 24 22 21 26 26 C 1.53779 * 113.61382 * 277.49788 * 6 4 3 27 27 H 1.08996 * 109.47358 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47195 * 300.00511 * 1 2 3 29 29 H 1.09000 * 109.46818 * 59.99709 * 1 2 3 30 30 H 1.09008 * 109.47155 * 239.99686 * 2 1 3 31 31 H 1.09000 * 109.46818 * 120.00291 * 2 1 3 32 32 H 1.08999 * 113.61525 * 254.53198 * 8 6 4 33 33 H 1.08996 * 113.61814 * 25.34550 * 8 6 4 34 34 H 1.08995 * 109.47636 * 300.00364 * 11 9 8 35 35 H 1.08997 * 109.46941 * 60.00382 * 11 9 8 36 36 H 1.08997 * 109.47512 * 13.43870 * 18 17 16 37 37 H 0.96697 * 113.99946 * 66.48715 * 19 18 17 38 38 H 1.48498 * 109.99678 * 299.99417 * 20 18 17 39 39 H 1.48497 * 110.00096 * 61.31314 * 20 18 17 40 40 H 1.07996 * 119.98053 * 179.97438 * 21 17 16 41 41 H 1.07995 * 119.97856 * 180.02562 * 24 22 21 42 42 H 1.08006 * 120.02584 * 180.27455 * 25 24 22 43 43 H 1.09000 * 113.61342 * 334.56910 * 26 6 4 44 44 H 1.09007 * 113.61179 * 105.38029 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9209 2.9373 0.0012 7 1 3.4709 3.5821 0.7560 8 6 5.4583 2.9679 0.0011 9 6 5.3590 4.1422 -0.9869 10 9 5.2876 5.3933 -0.3650 11 6 6.4017 4.0917 -2.1055 12 16 6.1841 5.5222 -3.1998 13 8 4.9666 5.4149 -3.9246 14 8 6.5316 6.7235 -2.5250 15 8 7.2660 5.3589 -4.2578 16 6 7.0072 4.3823 -5.1669 17 6 7.5634 3.1215 -5.0092 18 6 8.4558 2.8333 -3.8295 19 8 9.8132 2.7493 -4.2683 20 14 7.9537 1.2169 -3.0512 21 6 7.2987 2.1300 -5.9342 22 6 6.4800 2.3942 -7.0175 23 35 6.1201 1.0354 -8.2824 24 6 5.9242 3.6512 -7.1767 25 6 6.1814 4.6434 -6.2509 26 6 3.9870 3.5772 -1.3956 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5139 -0.8900 30 1 1.8934 -0.5139 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 5.8896 3.2425 0.9637 33 1 5.9129 2.0745 -0.4269 34 1 7.4014 4.1152 -1.6718 35 1 6.2757 3.1731 -2.6785 36 1 8.3599 3.6347 -3.0969 37 1 10.1737 3.5854 -4.5939 38 1 6.5439 1.2914 -2.5905 39 1 8.1104 0.1114 -4.0302 40 1 7.7318 1.1483 -5.8120 41 1 5.2850 3.8553 -8.0229 42 1 5.7438 5.6232 -6.3732 43 1 4.0393 2.8508 -2.2066 44 1 3.2290 4.3428 -1.5614 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_79519_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:50:07 Heat of formation + Delta-G solvation = -188.825739 kcal Electronic energy + Delta-G solvation = -36667.340046 eV Core-core repulsion = 31449.310787 eV Total energy + Delta-G solvation = -5218.029259 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -49.27660 -42.82554 -41.88751 -39.84566 -39.40361 -38.70245 -37.88287 -37.59207 -37.54322 -33.65863 -33.19928 -32.82539 -32.12650 -30.38806 -27.65237 -27.34558 -26.75088 -24.88768 -24.01544 -23.40456 -22.51145 -21.67360 -20.97212 -20.01490 -19.40826 -19.16700 -18.79974 -18.66716 -17.85748 -17.68418 -17.53450 -17.23099 -17.19092 -16.58071 -16.41636 -16.23926 -16.11014 -15.77705 -15.51297 -15.37535 -14.83621 -14.76335 -14.71821 -14.59474 -14.41779 -14.14303 -14.04772 -13.76556 -13.71514 -13.64802 -13.58629 -13.37610 -13.18748 -13.07838 -13.04379 -12.97778 -12.62241 -12.53159 -12.16051 -12.00101 -11.94266 -11.69040 -11.60376 -11.58544 -11.52042 -11.45728 -11.35563 -10.55710 -10.13695 -5.05307 -1.56525 -0.59236 -0.37034 0.20741 0.59907 0.95575 1.02503 1.41761 1.52155 1.76341 1.85636 2.11818 2.42803 2.58608 2.60717 2.77529 2.95001 3.11921 3.12820 3.18510 3.37234 3.50496 3.56635 3.65665 3.66723 3.75369 3.89205 3.94802 4.00574 4.01388 4.14745 4.22566 4.28925 4.29958 4.36628 4.37367 4.56478 4.57789 4.64913 4.67838 4.73755 4.79088 4.86807 4.98527 5.10029 5.14438 5.37505 6.46629 6.56556 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.474 3.526 5 O -0.527 6.527 6 C -0.109 4.109 7 H 0.155 0.845 8 C -0.119 4.119 9 C 0.100 3.900 10 F -0.180 7.180 11 C -0.684 4.684 12 S 2.591 3.409 13 O -0.952 6.952 14 O -0.939 6.939 15 O -0.655 6.655 16 C 0.069 3.931 17 C -0.117 4.117 18 C -0.102 4.102 19 O -0.531 6.531 20 Si 0.773 3.227 21 C -0.075 4.075 22 C -0.079 4.079 23 Br -0.023 7.023 24 C -0.064 4.064 25 C -0.087 4.087 26 C -0.152 4.152 27 H 0.096 0.904 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.072 0.928 32 H 0.123 0.877 33 H 0.128 0.872 34 H 0.199 0.801 35 H 0.164 0.836 36 H 0.091 0.909 37 H 0.385 0.615 38 H -0.232 1.232 39 H -0.270 1.270 40 H 0.155 0.845 41 H 0.176 0.824 42 H 0.165 0.835 43 H 0.118 0.882 44 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.612 -3.549 0.951 3.725 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.318 3.682 5 O -0.416 6.416 6 C -0.127 4.127 7 H 0.173 0.827 8 C -0.157 4.157 9 C 0.080 3.920 10 F -0.160 7.160 11 C -0.811 4.811 12 S 2.687 3.313 13 O -0.951 6.951 14 O -0.937 6.937 15 O -0.614 6.614 16 C 0.027 3.973 17 C -0.120 4.120 18 C -0.209 4.209 19 O -0.338 6.338 20 Si 0.671 3.329 21 C -0.095 4.095 22 C -0.160 4.160 23 Br 0.063 6.937 24 C -0.084 4.084 25 C -0.108 4.108 26 C -0.190 4.190 27 H 0.115 0.885 28 H 0.087 0.913 29 H 0.086 0.914 30 H 0.088 0.912 31 H 0.090 0.910 32 H 0.142 0.858 33 H 0.146 0.854 34 H 0.217 0.783 35 H 0.181 0.819 36 H 0.108 0.892 37 H 0.235 0.765 38 H -0.156 1.156 39 H -0.195 1.195 40 H 0.173 0.827 41 H 0.193 0.807 42 H 0.183 0.817 43 H 0.136 0.864 44 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -1.253 -4.858 0.360 5.030 hybrid contribution 0.146 1.244 -0.514 1.354 sum -1.108 -3.613 -0.154 3.782 Atomic orbital electron populations 1.21836 0.90901 1.04273 1.03704 1.23291 0.96823 0.79129 1.02751 1.86530 1.24135 1.33727 1.83295 1.23638 0.80727 0.92387 0.71423 1.90673 1.60952 1.43687 1.46286 1.22596 0.97819 0.91001 1.01323 0.82703 1.23699 0.93409 0.97102 1.01457 1.21263 0.95401 0.82165 0.93157 1.93003 1.97048 1.42273 1.83721 1.31733 1.12246 1.23251 1.13832 1.05584 0.73578 0.76803 0.75294 1.93647 1.46330 1.87193 1.67889 1.93664 1.82557 1.42619 1.74846 1.85751 1.67737 1.58465 1.49447 1.18139 1.02397 0.84998 0.91799 1.20617 1.00433 0.91305 0.99682 1.25966 0.84538 1.15421 0.95001 1.86729 1.22746 1.39169 1.85162 0.92698 0.81261 0.72501 0.86469 1.21142 0.96180 1.00090 0.92112 1.22215 1.01718 0.95382 0.96700 1.96882 1.94363 1.48164 1.54245 1.21438 0.97834 0.89669 0.99464 1.21728 0.95288 1.02168 0.91601 1.23917 0.96106 1.02080 0.96895 0.88507 0.91252 0.91401 0.91208 0.90971 0.85831 0.85433 0.78323 0.81874 0.89167 0.76501 1.15626 1.19534 0.82721 0.80673 0.81701 0.86392 0.86699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.64 10.29 71.98 0.74 1.38 16 2 C 0.05 -0.02 6.19 71.98 0.45 0.42 16 3 O -0.36 -0.78 10.22 -51.42 -0.53 -1.30 16 4 C 0.47 0.95 7.48 71.24 0.53 1.49 16 5 O -0.53 -3.47 15.65 21.95 0.34 -3.13 16 6 C -0.11 0.34 4.24 -11.02 -0.05 0.30 16 7 H 0.16 -1.01 8.14 -2.39 -0.02 -1.03 16 8 C -0.12 0.62 6.85 31.12 0.21 0.83 16 9 C 0.10 -0.25 1.63 -10.22 -0.02 -0.27 16 10 F -0.18 -0.37 16.28 44.97 0.73 0.36 16 11 C -0.68 2.75 3.28 71.98 0.24 2.99 16 12 S 2.59 8.84 4.88 -56.49 -0.28 8.56 16 13 O -0.95 -5.65 15.83 -118.57 -1.88 -7.52 16 14 O -0.94 -10.13 17.54 -118.57 -2.08 -12.21 16 15 O -0.66 -1.21 9.06 -61.63 -0.56 -1.77 16 16 C 0.07 0.07 4.89 22.50 0.11 0.18 16 17 C -0.12 0.09 4.19 -19.77 -0.08 0.01 16 18 C -0.10 0.40 2.10 71.24 0.15 0.55 16 19 O -0.53 1.67 12.63 -148.98 -1.88 -0.21 16 20 Si 0.77 -3.52 29.27 68.60 2.01 -1.51 16 21 C -0.08 0.01 8.42 22.27 0.19 0.19 16 22 C -0.08 0.02 6.22 22.32 0.14 0.16 16 23 Br -0.02 0.00 33.70 -20.37 -0.69 -0.68 16 24 C -0.06 0.13 9.78 22.27 0.22 0.35 16 25 C -0.09 0.00 8.60 22.36 0.19 0.19 16 26 C -0.15 0.43 7.08 31.16 0.22 0.65 16 27 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 28 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 29 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 30 H 0.07 -0.03 8.14 -2.38 -0.02 -0.05 16 31 H 0.07 -0.04 8.13 -2.39 -0.02 -0.06 16 32 H 0.12 -1.04 8.14 -2.39 -0.02 -1.06 16 33 H 0.13 -0.76 7.34 -2.39 -0.02 -0.78 16 34 H 0.20 -2.28 6.84 -2.39 -0.02 -2.29 16 35 H 0.16 -1.07 3.71 -2.39 -0.01 -1.08 16 36 H 0.09 -0.74 4.03 -2.39 -0.01 -0.75 16 37 H 0.39 -3.08 9.12 -74.06 -0.68 -3.76 16 38 H -0.23 1.08 6.23 99.48 0.62 1.70 16 39 H -0.27 -0.22 6.61 99.48 0.66 0.44 16 40 H 0.16 -0.10 6.42 -2.91 -0.02 -0.12 16 41 H 0.18 -1.16 8.06 -2.91 -0.02 -1.19 16 42 H 0.17 -0.33 7.93 -2.91 -0.02 -0.36 16 43 H 0.12 -0.49 7.91 -2.39 -0.02 -0.50 16 44 H 0.11 -0.41 8.14 -2.38 -0.02 -0.43 16 Total: 0.00 -21.35 395.61 -1.25 -22.60 By element: Atomic # 1 Polarization: -12.93 SS G_CDS: 0.31 Total: -12.62 kcal Atomic # 6 Polarization: 6.18 SS G_CDS: 3.24 Total: 9.41 kcal Atomic # 8 Polarization: -19.56 SS G_CDS: -6.58 Total: -26.14 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.73 Total: 0.36 kcal Atomic # 14 Polarization: -3.52 SS G_CDS: 2.01 Total: -1.51 kcal Atomic # 16 Polarization: 8.84 SS G_CDS: -0.28 Total: 8.56 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.68 kcal Total: -21.35 -1.25 -22.60 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79519_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.223 kcal (2) G-P(sol) polarization free energy of solvation -21.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.574 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.603 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.826 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds