Wall clock time and date at job start Mon Mar 8 2021 13:00:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45205 * 109.47294 * 2 1 4 4 C 1.34227 * 117.00016 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00311 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99669 * 179.97438 * 4 3 2 7 7 H 1.09003 * 112.84695 * 311.20095 * 6 4 3 8 8 C 1.53778 * 113.61115 * 82.50787 * 6 4 3 9 9 C 1.53781 * 87.07901 * 139.98039 * 8 6 4 10 10 F 1.39905 * 113.68855 * 220.00509 * 9 8 6 11 11 C 1.53002 * 113.61585 * 89.11705 * 9 8 6 12 12 S 1.81397 * 109.47268 * 82.50044 * 11 9 8 13 13 O 1.42101 * 110.54571 * 63.30387 * 12 11 9 14 14 O 1.42104 * 110.54371 * 286.55266 * 12 11 9 15 15 O 1.52203 * 104.44999 * 174.92969 * 12 11 9 16 16 C 1.35891 * 113.99856 * 77.10335 * 15 12 11 17 17 C 1.38757 * 120.03204 * 98.63825 * 16 15 12 18 18 C 1.50708 * 119.96666 * 0.02562 * 17 16 15 19 19 O 1.42903 * 109.46570 * 283.73610 * 18 17 16 20 20 Si 1.86300 * 109.46893 * 163.74074 * 18 17 16 21 21 C 1.38198 * 120.05797 * 180.26893 * 17 16 15 22 22 C 1.38149 * 120.10731 * 359.49093 * 21 17 16 23 23 C 1.38795 * 120.05820 * 0.25846 * 22 21 17 24 24 O 1.35893 * 120.02898 * 180.02562 * 23 22 21 25 25 C 1.42896 * 116.99923 * 0.02562 * 24 23 22 26 26 C 1.53002 * 109.46987 * 179.97438 * 25 24 23 27 27 C 1.38617 * 119.94193 * 359.97438 * 23 22 21 28 28 C 1.53776 * 113.61095 * 180.02562 * 6 4 3 29 29 H 1.08998 * 109.47372 * 59.99773 * 1 2 3 30 30 H 1.09000 * 109.47066 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47049 * 299.99485 * 1 2 3 32 32 H 1.09004 * 109.47049 * 240.00515 * 2 1 3 33 33 H 1.08998 * 109.47372 * 120.00226 * 2 1 3 34 34 H 1.08996 * 113.61489 * 25.42671 * 8 6 4 35 35 H 1.08999 * 113.61203 * 254.52740 * 8 6 4 36 36 H 1.09005 * 109.46776 * 322.49929 * 11 9 8 37 37 H 1.08999 * 109.47450 * 202.50474 * 11 9 8 38 38 H 1.08998 * 109.47528 * 43.73810 * 18 17 16 39 39 H 0.96696 * 114.00414 * 299.99826 * 19 18 17 40 40 H 1.48497 * 109.99899 * 179.97438 * 20 18 17 41 41 H 1.48498 * 110.00044 * 301.31620 * 20 18 17 42 42 H 1.07998 * 119.94183 * 179.76869 * 21 17 16 43 43 H 1.07999 * 119.97391 * 180.27175 * 22 21 17 44 44 H 1.09005 * 109.46784 * 299.99472 * 25 24 23 45 45 H 1.08997 * 109.47425 * 60.00163 * 25 24 23 46 46 H 1.08997 * 109.47207 * 299.99683 * 26 25 24 47 47 H 1.08999 * 109.47362 * 59.99911 * 26 25 24 48 48 H 1.09001 * 109.47275 * 179.97438 * 26 25 24 49 49 H 1.07999 * 120.04984 * 180.02562 * 27 23 22 50 50 H 1.09000 * 113.61415 * 105.47392 * 28 6 4 51 51 H 1.08996 * 113.61583 * 334.56867 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5867 0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.4714 3.5810 -0.7564 8 6 3.9857 3.5777 1.3967 9 6 5.3560 4.1430 0.9875 10 9 6.3097 4.1005 2.0102 11 6 5.2762 5.5107 0.3062 12 16 5.1596 6.8089 1.5677 13 8 6.3327 6.8321 2.3693 14 8 3.8677 6.8144 2.1596 15 8 5.2172 8.1100 0.7802 16 6 4.0535 8.4301 0.1558 17 6 3.1828 9.3423 0.7348 18 6 3.5286 9.9785 2.0565 19 8 3.3070 9.0387 3.1099 20 14 2.4539 11.4765 2.3245 21 6 1.9966 9.6641 0.1029 22 6 1.6795 9.0866 -1.1114 23 6 2.5494 8.1776 -1.6972 24 8 2.2371 7.6103 -2.8920 25 6 0.9974 7.9960 -3.4889 26 6 0.8208 7.2599 -4.8185 27 6 3.7376 7.8496 -1.0631 28 6 5.4582 2.9681 0.0001 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8901 32 1 1.8933 -0.5138 -0.8901 33 1 1.8933 -0.5138 0.8899 34 1 4.0374 2.8515 2.2078 35 1 3.2285 4.3443 1.5611 36 1 4.3951 5.5464 -0.3346 37 1 6.1704 5.6691 -0.2967 38 1 4.5763 10.2791 2.0521 39 1 2.3938 8.7271 3.1734 40 1 2.7847 12.1127 3.6249 41 1 2.6514 12.4478 1.2187 42 1 1.3186 10.3715 0.5570 43 1 0.7539 9.3430 -1.6054 44 1 0.1764 7.7393 -2.8193 45 1 0.9987 9.0713 -3.6667 46 1 1.6417 7.5169 -5.4879 47 1 0.8196 6.1845 -4.6412 48 1 -0.1251 7.5537 -5.2737 49 1 4.4159 7.1427 -1.5176 50 1 5.8895 3.2428 -0.9625 51 1 5.9127 2.0753 0.4293 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79574_15494190.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:00:20 Heat of formation + Delta-G solvation = -237.917136 kcal Electronic energy + Delta-G solvation = -41196.249905 eV Core-core repulsion = 35686.152456 eV Total energy + Delta-G solvation = -5510.097449 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 419.132 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -48.97096 -42.58681 -41.87318 -40.89531 -39.62690 -38.80024 -38.15506 -37.51141 -37.27972 -36.97176 -33.48327 -32.84047 -32.08465 -31.52693 -31.38620 -27.42082 -27.17366 -26.69457 -25.52705 -24.20679 -23.89930 -23.12092 -22.34939 -21.62700 -20.57853 -19.93115 -19.43889 -18.95901 -18.71250 -18.23306 -18.06212 -17.90651 -17.67495 -17.37810 -17.23337 -16.98172 -16.72764 -16.58479 -16.17403 -15.99438 -15.81223 -15.50510 -15.42454 -15.16731 -14.88524 -14.62525 -14.59626 -14.48699 -14.23447 -14.08306 -13.90685 -13.83385 -13.78935 -13.75195 -13.63012 -13.16472 -13.12411 -13.09059 -13.06566 -12.92902 -12.90434 -12.82607 -12.57452 -12.53508 -12.29875 -12.21818 -12.03386 -11.95751 -11.90535 -11.57813 -11.49286 -11.43210 -10.39343 -10.39199 -9.57464 -5.10687 -1.19808 -0.24594 -0.11026 0.90979 1.04967 1.21067 1.51082 1.59553 1.80644 1.95287 2.13453 2.39043 2.55491 2.75234 2.84729 2.89758 3.06266 3.24648 3.28628 3.35749 3.46654 3.56609 3.63610 3.69019 3.71272 3.75229 3.84689 3.87051 3.90942 3.91889 3.94720 3.97250 4.03754 4.08523 4.24527 4.31672 4.39238 4.40086 4.44279 4.49454 4.57415 4.60871 4.61683 4.65688 4.67969 4.75744 4.79817 4.91078 4.92013 4.93886 4.97201 5.27942 5.38457 5.98785 6.65235 6.73886 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.354 6.354 4 C 0.475 3.525 5 O -0.500 6.500 6 C -0.107 4.107 7 H 0.135 0.865 8 C -0.147 4.147 9 C 0.104 3.896 10 F -0.178 7.178 11 C -0.681 4.681 12 S 2.601 3.399 13 O -0.903 6.903 14 O -0.913 6.913 15 O -0.660 6.660 16 C 0.136 3.864 17 C -0.128 4.128 18 C -0.082 4.082 19 O -0.522 6.522 20 Si 0.691 3.309 21 C -0.052 4.052 22 C -0.187 4.187 23 C 0.162 3.838 24 O -0.309 6.309 25 C 0.051 3.949 26 C -0.155 4.155 27 C -0.185 4.185 28 C -0.122 4.122 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.068 0.932 32 H 0.072 0.928 33 H 0.072 0.928 34 H 0.116 0.884 35 H 0.111 0.889 36 H 0.157 0.843 37 H 0.156 0.844 38 H 0.117 0.883 39 H 0.384 0.616 40 H -0.249 1.249 41 H -0.254 1.254 42 H 0.149 0.851 43 H 0.146 0.854 44 H 0.070 0.930 45 H 0.068 0.932 46 H 0.068 0.932 47 H 0.068 0.932 48 H 0.083 0.917 49 H 0.150 0.850 50 H 0.099 0.901 51 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.961 1.162 -6.751 12.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.317 3.683 5 O -0.387 6.387 6 C -0.126 4.126 7 H 0.153 0.847 8 C -0.184 4.184 9 C 0.084 3.916 10 F -0.158 7.158 11 C -0.804 4.804 12 S 2.692 3.308 13 O -0.901 6.901 14 O -0.911 6.911 15 O -0.618 6.618 16 C 0.095 3.905 17 C -0.131 4.131 18 C -0.193 4.193 19 O -0.328 6.328 20 Si 0.592 3.408 21 C -0.070 4.070 22 C -0.206 4.206 23 C 0.116 3.884 24 O -0.222 6.222 25 C -0.024 4.024 26 C -0.212 4.212 27 C -0.206 4.206 28 C -0.160 4.160 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.087 0.913 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.134 0.866 35 H 0.130 0.870 36 H 0.174 0.826 37 H 0.175 0.825 38 H 0.135 0.865 39 H 0.232 0.768 40 H -0.173 1.173 41 H -0.179 1.179 42 H 0.166 0.834 43 H 0.164 0.836 44 H 0.088 0.912 45 H 0.086 0.914 46 H 0.087 0.913 47 H 0.087 0.913 48 H 0.102 0.898 49 H 0.167 0.833 50 H 0.117 0.883 51 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -8.866 2.068 -6.014 10.911 hybrid contribution 0.854 -0.807 -0.901 1.481 sum -8.012 1.261 -6.915 10.659 Atomic orbital electron populations 1.21825 0.92199 1.03335 1.03715 1.23127 0.95703 0.79620 1.02885 1.86507 1.23978 1.32967 1.83599 1.23138 0.80900 0.91768 0.72453 1.90706 1.60524 1.42675 1.44757 1.22277 0.97250 0.92194 1.00917 0.84731 1.23843 0.95920 1.02074 0.96611 1.21502 0.88960 0.93357 0.87744 1.93020 1.65684 1.97197 1.59896 1.31473 1.14086 1.13807 1.20991 1.05578 0.75636 0.74464 0.75091 1.93688 1.49846 1.83894 1.62649 1.93663 1.40713 1.83450 1.73318 1.85757 1.42976 1.60527 1.72547 1.17305 0.82047 0.99410 0.91781 1.20403 0.94652 0.99225 0.98838 1.25186 1.07792 1.01625 0.84673 1.86580 1.34848 1.61837 1.49515 0.95100 0.88361 0.76119 0.81247 1.20752 0.94490 0.97711 0.93998 1.21467 1.01511 0.99886 0.97769 1.18454 0.92591 0.91784 0.85594 1.86104 1.40459 1.64332 1.31345 1.22979 0.83876 1.00077 0.95455 1.21807 1.03152 1.01521 0.94699 1.20484 0.98342 1.06546 0.95184 1.23630 0.93548 0.98200 1.00666 0.91355 0.89942 0.91254 0.91002 0.90951 0.86579 0.87021 0.82552 0.82542 0.86546 0.76774 1.17323 1.17851 0.83420 0.83585 0.91206 0.91371 0.91299 0.91256 0.89843 0.83283 0.88259 0.86116 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.34 10.29 37.16 0.38 0.72 16 2 C 0.06 -0.02 6.19 37.16 0.23 0.21 16 3 O -0.35 -0.34 10.22 -39.25 -0.40 -0.74 16 4 C 0.48 0.69 7.48 36.01 0.27 0.96 16 5 O -0.50 -2.17 15.65 -18.75 -0.29 -2.46 16 6 C -0.11 0.13 3.91 -90.96 -0.36 -0.23 16 7 H 0.13 -0.53 7.66 -51.93 -0.40 -0.92 16 8 C -0.15 0.09 7.09 -25.92 -0.18 -0.09 16 9 C 0.10 0.05 1.79 -89.79 -0.16 -0.12 16 10 F -0.18 -0.68 16.10 2.25 0.04 -0.64 16 11 C -0.68 0.84 4.72 37.16 0.18 1.01 16 12 S 2.60 7.48 4.98 -107.50 -0.54 6.94 16 13 O -0.90 -6.58 17.26 -67.04 -1.16 -7.74 16 14 O -0.91 -2.75 13.62 -70.44 -0.96 -3.71 16 15 O -0.66 -1.69 9.36 -51.72 -0.48 -2.17 16 16 C 0.14 0.15 4.60 -39.24 -0.18 -0.03 16 17 C -0.13 -0.03 4.95 -104.44 -0.52 -0.55 16 18 C -0.08 -0.08 2.39 36.01 0.09 0.01 16 19 O -0.52 -1.05 10.29 -57.42 -0.59 -1.64 16 20 Si 0.69 -0.91 29.94 -169.99 -5.09 -6.00 16 21 C -0.05 0.13 8.65 -39.63 -0.34 -0.21 16 22 C -0.19 0.54 9.04 -39.41 -0.36 0.18 16 23 C 0.16 -0.24 6.68 -39.24 -0.26 -0.50 16 24 O -0.31 0.51 10.13 -19.40 -0.20 0.32 16 25 C 0.05 -0.21 5.46 37.16 0.20 0.00 16 26 C -0.15 0.67 10.28 37.16 0.38 1.05 16 27 C -0.19 0.16 8.50 -39.29 -0.33 -0.17 16 28 C -0.12 0.08 6.89 -25.90 -0.18 -0.10 16 29 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 31 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 33 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 34 H 0.12 -0.06 8.09 -51.93 -0.42 -0.49 16 35 H 0.11 -0.21 7.68 -51.93 -0.40 -0.61 16 36 H 0.16 -0.67 5.52 -51.92 -0.29 -0.96 16 37 H 0.16 -0.54 8.14 -51.92 -0.42 -0.96 16 38 H 0.12 0.25 7.79 -51.93 -0.40 -0.15 16 39 H 0.38 -0.69 8.70 45.56 0.40 -0.30 16 40 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 41 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 42 H 0.15 -0.81 5.17 -52.49 -0.27 -1.08 16 43 H 0.15 -0.81 6.29 -52.49 -0.33 -1.14 16 44 H 0.07 -0.38 7.66 -51.93 -0.40 -0.77 16 45 H 0.07 -0.34 7.66 -51.93 -0.40 -0.74 16 46 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 47 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 48 H 0.08 -0.46 8.14 -51.93 -0.42 -0.88 16 49 H 0.15 -0.47 6.65 -52.49 -0.35 -0.82 16 50 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 51 H 0.12 0.07 7.43 -51.93 -0.39 -0.31 16 LS Contribution 428.34 15.07 6.46 6.46 Total: 0.00 -12.59 428.34 -11.42 -24.01 By element: Atomic # 1 Polarization: -7.71 SS G_CDS: -7.07 Total: -14.78 kcal Atomic # 6 Polarization: 3.30 SS G_CDS: -1.14 Total: 2.15 kcal Atomic # 8 Polarization: -14.06 SS G_CDS: -4.08 Total: -18.14 kcal Atomic # 9 Polarization: -0.68 SS G_CDS: 0.04 Total: -0.64 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.09 Total: -6.00 kcal Atomic # 16 Polarization: 7.48 SS G_CDS: -0.54 Total: 6.94 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -12.59 -11.42 -24.01 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79574_15494190.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -213.904 kcal (2) G-P(sol) polarization free energy of solvation -12.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -226.492 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds