Wall clock time and date at job start Mon Mar 8 2021 13:30:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45199 * 109.47470 * 2 1 4 4 C 1.34223 * 117.00007 * 180.02562 * 3 2 1 5 5 O 1.20825 * 120.00216 * 359.97438 * 4 3 2 6 6 C 1.50708 * 119.99733 * 180.02562 * 4 3 2 7 7 H 1.08995 * 112.85352 * 48.79925 * 6 4 3 8 8 C 1.53779 * 113.61071 * 179.97438 * 6 4 3 9 9 C 1.53784 * 87.07871 * 140.06226 * 8 6 4 10 10 F 1.39896 * 113.61490 * 89.20261 * 9 8 6 11 11 C 1.53007 * 113.61226 * 220.01693 * 9 8 6 12 12 S 1.81402 * 109.47123 * 179.97438 * 11 9 8 13 13 O 1.42102 * 110.54192 * 68.37498 * 12 11 9 14 14 O 1.42098 * 110.54194 * 291.62780 * 12 11 9 15 15 O 1.52194 * 104.45071 * 179.97438 * 12 11 9 16 16 C 1.35907 * 113.99887 * 74.99918 * 15 12 11 17 17 C 1.38749 * 120.02376 * 89.99900 * 16 15 12 18 18 C 1.50702 * 119.97572 * 0.02562 * 17 16 15 19 19 O 1.42892 * 109.47242 * 74.71999 * 18 17 16 20 20 Si 1.86298 * 109.46915 * 194.72538 * 18 17 16 21 21 C 1.38196 * 120.05167 * 179.72569 * 17 16 15 22 22 C 1.38161 * 120.11020 * 0.25613 * 21 17 16 23 23 C 1.38792 * 120.05122 * 359.97438 * 22 21 17 24 24 O 1.35901 * 120.02425 * 179.97438 * 23 22 21 25 25 C 1.42903 * 116.99923 * 0.02562 * 24 23 22 26 26 C 1.52997 * 109.46923 * 180.02562 * 25 24 23 27 27 C 1.38614 * 119.94847 * 0.02562 * 23 22 21 28 28 C 1.53777 * 87.08032 * 334.56246 * 9 8 6 29 29 H 1.09005 * 109.47114 * 299.99841 * 1 2 3 30 30 H 1.09003 * 109.47507 * 59.99938 * 1 2 3 31 31 H 1.09005 * 109.47657 * 180.02562 * 1 2 3 32 32 H 1.09006 * 109.46599 * 240.00060 * 2 1 3 33 33 H 1.08999 * 109.47074 * 120.00311 * 2 1 3 34 34 H 1.09000 * 113.61714 * 25.51748 * 8 6 4 35 35 H 1.08998 * 113.69089 * 254.62168 * 8 6 4 36 36 H 1.08998 * 109.47063 * 59.99985 * 11 9 8 37 37 H 1.09001 * 109.46932 * 300.00050 * 11 9 8 38 38 H 1.09000 * 109.46724 * 314.72045 * 18 17 16 39 39 H 0.96703 * 114.00176 * 180.02562 * 19 18 17 40 40 H 1.48506 * 109.99834 * 178.68053 * 20 18 17 41 41 H 1.48502 * 110.00011 * 299.99318 * 20 18 17 42 42 H 1.08000 * 119.94761 * 180.23156 * 21 17 16 43 43 H 1.08000 * 119.97282 * 179.97438 * 22 21 17 44 44 H 1.09002 * 109.46910 * 299.99486 * 25 24 23 45 45 H 1.08995 * 109.47433 * 59.99749 * 25 24 23 46 46 H 1.09000 * 109.46856 * 299.99930 * 26 25 24 47 47 H 1.08995 * 109.47425 * 59.99556 * 26 25 24 48 48 H 1.09003 * 109.47040 * 180.02562 * 26 25 24 49 49 H 1.07997 * 120.05483 * 179.97438 * 27 23 22 50 50 H 1.09006 * 113.60853 * 139.98209 * 28 9 8 51 51 H 1.08996 * 113.61808 * 270.88218 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5447 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9207 2.9373 0.0000 7 1 3.4715 3.5809 0.7563 8 6 5.4582 2.9679 -0.0001 9 6 5.3564 4.1441 -0.9855 10 9 5.2852 5.3939 -0.3610 11 6 6.3985 4.0978 -2.1049 12 16 6.1771 5.5294 -3.1968 13 8 6.5221 6.7305 -2.5204 14 8 4.9594 5.4204 -3.9211 15 8 7.2594 5.3710 -4.2549 16 6 6.9948 4.4077 -5.1764 17 6 6.3044 4.7276 -6.3366 18 6 5.8484 6.1441 -6.5751 19 8 6.9706 6.9512 -6.9371 20 14 4.5949 6.1692 -7.9530 21 6 6.0400 3.7497 -7.2766 22 6 6.4575 2.4504 -7.0613 23 6 7.1443 2.1244 -5.9001 24 8 7.5543 0.8461 -5.6887 25 6 7.2448 -0.1108 -6.7039 26 6 7.7814 -1.4830 -6.2919 27 6 7.4108 3.1035 -4.9558 28 6 3.9862 3.5793 -1.3959 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3634 -1.0277 0.0005 32 1 1.8932 -0.5139 -0.8901 33 1 1.8933 -0.5139 0.8900 34 1 5.9127 2.0757 -0.4307 35 1 5.8909 3.2408 0.9624 36 1 6.2738 3.1802 -2.6797 37 1 7.3984 4.1221 -1.6716 38 1 5.3959 6.5381 -5.6650 39 1 6.7507 7.8777 -7.1055 40 1 4.1136 7.5562 -8.1766 41 1 5.1995 5.6343 -9.1995 42 1 5.5057 4.0014 -8.1808 43 1 6.2493 1.6878 -7.7972 44 1 6.1639 -0.1674 -6.8324 45 1 7.7069 0.1935 -7.6430 46 1 8.8623 -1.4267 -6.1630 47 1 7.3190 -1.7870 -5.3529 48 1 7.5458 -2.2128 -7.0665 49 1 7.9447 2.8517 -4.0514 50 1 3.2292 4.3463 -1.5597 51 1 4.0382 2.8542 -2.2080 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79574_16464788.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:30:48 Heat of formation + Delta-G solvation = -233.861806 kcal Electronic energy + Delta-G solvation = -40918.019795 eV Core-core repulsion = 35408.098199 eV Total energy + Delta-G solvation = -5509.921596 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 419.132 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -49.19787 -42.56566 -41.81134 -40.85499 -39.39963 -38.74267 -38.27857 -37.48802 -37.45775 -37.16663 -33.50276 -32.89465 -32.22609 -31.64868 -31.52326 -27.42395 -26.98783 -26.71527 -25.42884 -24.14281 -23.80860 -23.08582 -22.29768 -21.44084 -20.93199 -20.01425 -19.23386 -19.15594 -18.68284 -18.46786 -18.02640 -17.80177 -17.62671 -17.53566 -17.31055 -17.18452 -17.05160 -16.45546 -16.21678 -16.09291 -15.82051 -15.51802 -15.41905 -15.17408 -14.72602 -14.67901 -14.62947 -14.40500 -14.09541 -14.01427 -13.92268 -13.83764 -13.81017 -13.76398 -13.59619 -13.34749 -13.25064 -13.22400 -13.13608 -13.00495 -12.97741 -12.92482 -12.61031 -12.53325 -12.46250 -12.15974 -11.95843 -11.86221 -11.74282 -11.57764 -11.52925 -11.38640 -10.47072 -10.32115 -9.51568 -4.97179 -1.24721 -0.19592 -0.05482 0.84183 1.04822 1.23106 1.52406 1.54461 1.86427 1.87299 2.16758 2.35947 2.53132 2.64658 2.72178 2.83859 3.07389 3.16675 3.20950 3.37194 3.50517 3.60823 3.64800 3.73239 3.77066 3.80380 3.87782 3.90219 3.94705 3.96057 4.00898 4.02711 4.09506 4.19844 4.23183 4.24697 4.28954 4.35666 4.51571 4.55007 4.58472 4.65294 4.67229 4.67593 4.71160 4.76519 4.87034 4.91234 4.98275 4.99358 5.00633 5.32798 5.38803 6.05601 6.44339 6.65312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.502 6.502 6 C -0.110 4.110 7 H 0.138 0.862 8 C -0.121 4.121 9 C 0.103 3.897 10 F -0.171 7.171 11 C -0.675 4.675 12 S 2.591 3.409 13 O -0.905 6.905 14 O -0.935 6.935 15 O -0.650 6.650 16 C 0.126 3.874 17 C -0.075 4.075 18 C -0.095 4.095 19 O -0.531 6.531 20 Si 0.700 3.300 21 C -0.058 4.058 22 C -0.184 4.184 23 C 0.158 3.842 24 O -0.308 6.308 25 C 0.051 3.949 26 C -0.155 4.155 27 C -0.172 4.172 28 C -0.142 4.142 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.072 0.928 33 H 0.071 0.929 34 H 0.122 0.878 35 H 0.102 0.898 36 H 0.158 0.842 37 H 0.157 0.843 38 H 0.086 0.914 39 H 0.382 0.618 40 H -0.254 1.254 41 H -0.250 1.250 42 H 0.148 0.852 43 H 0.147 0.853 44 H 0.069 0.931 45 H 0.068 0.932 46 H 0.068 0.932 47 H 0.069 0.931 48 H 0.082 0.918 49 H 0.152 0.848 50 H 0.111 0.889 51 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.096 -6.762 -2.515 8.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.390 6.390 6 C -0.129 4.129 7 H 0.156 0.844 8 C -0.160 4.160 9 C 0.083 3.917 10 F -0.151 7.151 11 C -0.800 4.800 12 S 2.684 3.316 13 O -0.903 6.903 14 O -0.933 6.933 15 O -0.608 6.608 16 C 0.085 3.915 17 C -0.077 4.077 18 C -0.203 4.203 19 O -0.339 6.339 20 Si 0.600 3.400 21 C -0.076 4.076 22 C -0.203 4.203 23 C 0.112 3.888 24 O -0.221 6.221 25 C -0.024 4.024 26 C -0.212 4.212 27 C -0.193 4.193 28 C -0.180 4.180 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.100 0.900 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.140 0.860 35 H 0.120 0.880 36 H 0.176 0.824 37 H 0.175 0.825 38 H 0.104 0.896 39 H 0.230 0.770 40 H -0.179 1.179 41 H -0.175 1.175 42 H 0.165 0.835 43 H 0.164 0.836 44 H 0.087 0.913 45 H 0.086 0.914 46 H 0.087 0.913 47 H 0.088 0.912 48 H 0.101 0.899 49 H 0.170 0.830 50 H 0.130 0.870 51 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -3.758 -6.669 -3.283 8.329 hybrid contribution 1.040 0.466 0.623 1.298 sum -2.719 -6.203 -2.660 7.276 Atomic orbital electron populations 1.21829 0.92208 1.03309 1.03789 1.23118 0.95723 0.79648 1.02806 1.86520 1.24027 1.32924 1.83511 1.23213 0.80878 0.91814 0.72300 1.90691 1.60541 1.42714 1.45021 1.22482 0.97168 0.92090 1.01122 0.84405 1.23591 0.93792 0.97741 1.00854 1.21173 0.95481 0.82203 0.92863 1.93014 1.97019 1.41598 1.83453 1.31377 1.09684 1.25080 1.13814 1.05779 0.74000 0.76596 0.75225 1.93696 1.82156 1.40199 1.74231 1.93644 1.45951 1.86754 1.66950 1.85766 1.67298 1.59263 1.48510 1.17363 1.00316 0.84306 0.89562 1.19258 0.99609 0.95268 0.93608 1.25006 0.96006 0.89647 1.09675 1.86599 1.32124 1.24197 1.90985 0.94694 0.83308 0.85290 0.76741 1.20887 0.97166 0.91632 0.97908 1.21461 1.02688 0.98073 0.98072 1.18482 0.93084 0.84433 0.92818 1.86114 1.74697 1.15044 1.46288 1.22975 1.00813 0.88314 0.90312 1.21804 1.02658 0.93518 1.03181 1.20400 1.06288 0.89841 1.02765 1.23773 0.95951 1.01791 0.96454 0.91309 0.91243 0.89965 0.91008 0.91018 0.86024 0.87982 0.82436 0.82459 0.89639 0.76971 1.17900 1.17481 0.83450 0.83571 0.91276 0.91382 0.91276 0.91238 0.89880 0.83049 0.87043 0.86547 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.35 10.29 37.15 0.38 0.73 16 2 C 0.06 -0.03 6.18 37.15 0.23 0.20 16 3 O -0.35 -0.32 10.22 -39.24 -0.40 -0.72 16 4 C 0.48 0.52 7.49 36.01 0.27 0.79 16 5 O -0.50 -1.75 15.65 -18.75 -0.29 -2.04 16 6 C -0.11 0.11 4.24 -90.96 -0.39 -0.27 16 7 H 0.14 -0.33 8.14 -51.93 -0.42 -0.76 16 8 C -0.12 0.16 6.86 -25.92 -0.18 -0.02 16 9 C 0.10 -0.03 1.62 -89.80 -0.15 -0.18 16 10 F -0.17 -0.36 16.28 2.25 0.04 -0.33 16 11 C -0.67 0.80 5.16 37.16 0.19 0.99 16 12 S 2.59 6.79 4.65 -107.50 -0.50 6.29 16 13 O -0.90 -5.73 17.54 -67.04 -1.18 -6.90 16 14 O -0.93 -2.56 14.24 -67.03 -0.95 -3.52 16 15 O -0.65 -2.09 9.47 -51.77 -0.49 -2.58 16 16 C 0.13 0.30 4.78 -39.24 -0.19 0.11 16 17 C -0.07 -0.17 4.71 -104.45 -0.49 -0.66 16 18 C -0.09 -0.22 2.22 36.01 0.08 -0.14 16 19 O -0.53 -1.65 12.86 -35.23 -0.45 -2.10 16 20 Si 0.70 -0.10 30.19 -169.99 -5.13 -5.23 16 21 C -0.06 0.00 8.65 -39.63 -0.34 -0.34 16 22 C -0.18 0.22 9.04 -39.40 -0.36 -0.14 16 23 C 0.16 -0.01 6.68 -39.24 -0.26 -0.27 16 24 O -0.31 0.10 10.13 -19.43 -0.20 -0.09 16 25 C 0.05 -0.15 5.46 37.16 0.20 0.06 16 26 C -0.15 0.51 10.28 37.16 0.38 0.89 16 27 C -0.17 -0.07 8.39 -39.29 -0.33 -0.40 16 28 C -0.14 0.19 7.08 -25.92 -0.18 0.01 16 29 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 31 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.07 -0.05 8.13 -51.93 -0.42 -0.48 16 33 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 34 H 0.12 -0.19 7.40 -51.93 -0.38 -0.58 16 35 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.16 -0.58 6.38 -51.92 -0.33 -0.91 16 37 H 0.16 -0.52 8.14 -51.92 -0.42 -0.94 16 38 H 0.09 0.22 5.43 -51.93 -0.28 -0.06 16 39 H 0.38 -0.38 8.74 45.56 0.40 0.02 16 40 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 41 H -0.25 -0.26 6.75 56.52 0.38 0.12 16 42 H 0.15 -0.30 4.89 -52.49 -0.26 -0.55 16 43 H 0.15 -0.58 6.29 -52.49 -0.33 -0.91 16 44 H 0.07 -0.30 7.66 -51.93 -0.40 -0.69 16 45 H 0.07 -0.26 7.66 -51.93 -0.40 -0.66 16 46 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 47 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 48 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 49 H 0.15 -0.29 7.47 -52.49 -0.39 -0.69 16 50 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 51 H 0.12 -0.31 7.92 -51.93 -0.41 -0.72 16 LS Contribution 431.75 15.07 6.51 6.51 Total: 0.00 -11.55 431.75 -11.25 -22.80 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -7.07 Total: -13.44 kcal Atomic # 6 Polarization: 2.48 SS G_CDS: -1.12 Total: 1.36 kcal Atomic # 8 Polarization: -14.00 SS G_CDS: -3.96 Total: -17.96 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.33 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.13 Total: -5.23 kcal Atomic # 16 Polarization: 6.79 SS G_CDS: -0.50 Total: 6.29 kcal Total LS contribution 6.51 Total: 6.51 kcal Total: -11.55 -11.25 -22.80 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79574_16464788.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -211.061 kcal (2) G-P(sol) polarization free energy of solvation -11.548 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -222.609 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.253 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.801 kcal (6) G-S(sol) free energy of system = (1) + (5) -233.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds