Wall clock time and date at job start Mon Mar 8 2021 12:35:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45196 * 109.47153 * 2 1 4 4 C 1.34227 * 117.00027 * 179.97438 * 3 2 1 5 5 O 1.20826 * 120.00239 * 0.02562 * 4 3 2 6 6 C 1.50703 * 120.00259 * 180.02562 * 4 3 2 7 7 H 1.08998 * 112.84767 * 311.19629 * 6 4 3 8 8 C 1.53778 * 113.61622 * 82.50102 * 6 4 3 9 9 C 1.53785 * 87.08212 * 139.98279 * 8 6 4 10 10 F 1.39894 * 113.68867 * 89.12773 * 9 8 6 11 11 C 1.53001 * 113.61510 * 220.02331 * 9 8 6 12 12 S 1.81404 * 109.46919 * 282.49424 * 11 9 8 13 13 O 1.42103 * 110.53848 * 68.37798 * 12 11 9 14 14 O 1.42102 * 110.54363 * 291.62945 * 12 11 9 15 15 O 1.52192 * 104.44941 * 179.97438 * 12 11 9 16 16 C 1.35904 * 113.99815 * 74.99896 * 15 12 11 17 17 C 1.38705 * 120.05924 * 270.25476 * 16 15 12 18 18 C 1.38173 * 119.94203 * 180.25551 * 17 16 15 19 19 C 1.50701 * 119.96834 * 179.74471 * 18 17 16 20 20 O 1.42898 * 109.47201 * 65.02405 * 19 18 17 21 21 Si 1.86299 * 109.46917 * 185.02317 * 19 18 17 22 22 C 1.38232 * 120.05823 * 359.76822 * 18 17 16 23 23 C 1.38294 * 120.11124 * 359.97438 * 22 18 17 24 24 C 1.38122 * 120.05499 * 359.97438 * 23 22 18 25 25 C 1.53778 * 113.61894 * 180.02562 * 6 4 3 26 26 H 1.08996 * 109.47091 * 179.97438 * 1 2 3 27 27 H 1.09004 * 109.46737 * 299.99502 * 1 2 3 28 28 H 1.08996 * 109.46691 * 59.99429 * 1 2 3 29 29 H 1.09004 * 109.46737 * 240.00497 * 2 1 3 30 30 H 1.08995 * 109.47427 * 120.00674 * 2 1 3 31 31 H 1.09007 * 113.61329 * 25.43554 * 8 6 4 32 32 H 1.09000 * 113.61853 * 254.53230 * 8 6 4 33 33 H 1.09003 * 109.47041 * 162.49954 * 11 9 8 34 34 H 1.08995 * 109.47145 * 42.49613 * 11 9 8 35 35 H 1.07997 * 120.03160 * 0.02562 * 17 16 15 36 36 H 1.09005 * 109.47422 * 305.02069 * 19 18 17 37 37 H 0.96699 * 114.00084 * 59.99896 * 20 19 18 38 38 H 1.48502 * 110.00293 * 179.97438 * 21 19 18 39 39 H 1.48498 * 110.00243 * 301.31996 * 21 19 18 40 40 H 1.08002 * 119.94710 * 179.97438 * 22 18 17 41 41 H 1.07999 * 119.97251 * 180.02562 * 23 22 18 42 42 H 1.08002 * 120.02504 * 180.02562 * 24 23 22 43 43 H 1.08996 * 113.61786 * 105.46691 * 25 6 4 44 44 H 1.09012 * 113.68840 * 334.57724 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0012 7 1 3.4715 3.5816 -0.7546 8 6 3.9859 3.5765 1.3983 9 6 5.3563 4.1421 0.9896 10 9 5.2851 5.3932 0.3676 11 6 6.3981 4.0935 2.1090 12 16 6.0850 5.4386 3.2852 13 8 4.8760 5.2084 3.9956 14 8 6.3537 6.6984 2.6851 15 8 7.1734 5.2837 4.3377 16 6 8.4019 5.6950 3.9271 17 6 9.2625 4.8012 3.3072 18 6 10.5130 5.2206 2.8954 19 6 11.4507 4.2485 2.2271 20 8 10.8962 3.8348 0.9767 21 14 13.0953 5.0734 1.9344 22 6 10.9048 6.5309 3.0965 23 6 10.0465 7.4253 3.7096 24 6 8.7950 7.0113 4.1220 25 6 5.4583 2.9681 0.0011 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8901 28 1 -0.3632 0.5139 -0.8899 29 1 1.8933 -0.5138 -0.8901 30 1 1.8934 -0.5139 0.8899 31 1 4.0377 2.8496 2.2090 32 1 3.2288 4.3430 1.5636 33 1 7.3948 4.2080 1.6830 34 1 6.3316 3.1361 2.6258 35 1 8.9569 3.7774 3.1498 36 1 11.5899 3.3782 2.8686 37 1 10.7452 4.5593 0.3544 38 1 14.0294 4.1250 1.2762 39 1 12.9149 6.2796 1.0873 40 1 11.8828 6.8566 2.7744 41 1 10.3548 8.4486 3.8652 42 1 8.1250 7.7104 4.6004 43 1 5.8895 3.2435 -0.9613 44 1 5.9142 2.0752 0.4292 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79615_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:35:45 Heat of formation + Delta-G solvation = -201.321785 kcal Electronic energy + Delta-G solvation = -33243.213035 eV Core-core repulsion = 28364.459910 eV Total energy + Delta-G solvation = -4878.753125 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.101 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -49.19603 -42.36375 -41.81345 -39.95745 -39.40075 -38.35312 -37.72352 -37.46745 -37.23748 -33.01350 -32.83489 -32.18815 -31.66352 -27.44105 -27.26800 -26.89504 -24.92770 -24.00114 -23.39271 -22.34818 -21.38296 -20.93627 -19.56869 -19.24002 -18.92815 -18.71822 -18.26827 -17.84042 -17.64976 -17.60610 -17.27268 -16.92407 -16.43925 -16.42825 -16.20577 -16.14278 -15.66411 -15.42778 -15.16959 -14.72430 -14.66064 -14.46746 -14.38815 -14.27902 -14.19092 -13.81569 -13.80268 -13.46986 -13.31191 -13.20678 -13.19073 -13.14314 -13.05951 -13.00217 -12.96890 -12.60119 -12.51270 -12.23238 -11.96810 -11.83067 -11.57099 -11.54373 -11.40032 -10.88400 -10.31622 -10.19972 -5.12047 -1.26018 -0.19218 -0.12599 0.85711 1.04644 1.09654 1.43303 1.52727 1.81446 2.16603 2.31086 2.52881 2.63541 2.67323 2.92538 3.06187 3.08433 3.11237 3.25946 3.44695 3.49334 3.66577 3.74273 3.79563 3.89936 3.90744 3.94579 3.96180 4.06767 4.18191 4.22085 4.25698 4.26978 4.27817 4.50568 4.54682 4.56869 4.66469 4.68287 4.77816 4.82820 4.90007 4.98603 4.99474 5.03818 5.39327 5.48596 6.17446 6.65263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.475 3.525 5 O -0.502 6.502 6 C -0.109 4.109 7 H 0.138 0.862 8 C -0.147 4.147 9 C 0.104 3.896 10 F -0.170 7.170 11 C -0.674 4.674 12 S 2.594 3.406 13 O -0.913 6.913 14 O -0.931 6.931 15 O -0.659 6.659 16 C 0.062 3.938 17 C -0.107 4.107 18 C -0.101 4.101 19 C -0.079 4.079 20 O -0.528 6.528 21 Si 0.691 3.309 22 C -0.099 4.099 23 C -0.092 4.092 24 C -0.081 4.081 25 C -0.120 4.120 26 H 0.082 0.918 27 H 0.068 0.932 28 H 0.068 0.932 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.117 0.883 32 H 0.110 0.890 33 H 0.153 0.847 34 H 0.160 0.840 35 H 0.144 0.856 36 H 0.124 0.876 37 H 0.378 0.622 38 H -0.254 1.254 39 H -0.256 1.256 40 H 0.141 0.859 41 H 0.147 0.853 42 H 0.145 0.855 43 H 0.101 0.899 44 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.388 0.055 0.563 3.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.390 6.390 6 C -0.128 4.128 7 H 0.156 0.844 8 C -0.185 4.185 9 C 0.084 3.916 10 F -0.150 7.150 11 C -0.798 4.798 12 S 2.687 3.313 13 O -0.912 6.912 14 O -0.930 6.930 15 O -0.618 6.618 16 C 0.020 3.980 17 C -0.127 4.127 18 C -0.102 4.102 19 C -0.188 4.188 20 O -0.334 6.334 21 Si 0.591 3.409 22 C -0.117 4.117 23 C -0.110 4.110 24 C -0.101 4.101 25 C -0.158 4.158 26 H 0.101 0.899 27 H 0.088 0.912 28 H 0.087 0.913 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.135 0.865 32 H 0.129 0.871 33 H 0.171 0.829 34 H 0.178 0.822 35 H 0.162 0.838 36 H 0.142 0.858 37 H 0.226 0.774 38 H -0.178 1.178 39 H -0.181 1.181 40 H 0.158 0.842 41 H 0.165 0.835 42 H 0.163 0.837 43 H 0.119 0.881 44 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 3.826 -0.115 0.738 3.899 hybrid contribution -0.836 -0.647 -1.254 1.640 sum 2.990 -0.761 -0.516 3.128 Atomic orbital electron populations 1.21830 0.92188 1.03332 1.03781 1.23128 0.95747 0.79609 1.02833 1.86519 1.24006 1.32973 1.83489 1.23211 0.80901 0.91812 0.72304 1.90692 1.60540 1.42722 1.45036 1.22474 0.97209 0.92107 1.00979 0.84405 1.23817 0.96057 1.01966 0.96614 1.21159 0.95309 0.82176 0.92964 1.93009 1.97008 1.41458 1.83518 1.31361 1.09688 1.23905 1.14863 1.05648 0.74649 0.76208 0.74773 1.93675 1.42007 1.86345 1.69138 1.93685 1.83168 1.37835 1.78285 1.85770 1.29049 1.85913 1.61101 1.18101 0.82454 0.94119 1.03296 1.21196 0.93801 0.99876 0.97856 1.20172 0.94945 0.95109 0.99947 1.25124 1.04226 1.02625 0.86844 1.86624 1.84034 1.37476 1.25280 0.94852 0.76719 0.79191 0.90105 1.21370 1.00013 0.92668 0.97666 1.21141 0.92313 1.00698 0.96840 1.21448 0.97375 0.93732 0.97570 1.23582 0.93709 0.97766 1.00769 0.89930 0.91248 0.91309 0.90992 0.90979 0.86452 0.87141 0.82881 0.82151 0.83833 0.85775 0.77365 1.17831 1.18068 0.84198 0.83495 0.83676 0.88054 0.86043 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.24 10.29 37.16 0.38 0.62 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.35 -0.57 10.22 -39.25 -0.40 -0.98 16 4 C 0.48 0.83 7.48 36.01 0.27 1.10 16 5 O -0.50 -2.07 15.65 -18.75 -0.29 -2.37 16 6 C -0.11 0.06 4.24 -90.96 -0.39 -0.33 16 7 H 0.14 -0.28 8.14 -51.93 -0.42 -0.70 16 8 C -0.15 0.08 6.90 -25.92 -0.18 -0.09 16 9 C 0.10 -0.02 1.57 -89.79 -0.14 -0.16 16 10 F -0.17 -0.32 16.51 2.25 0.04 -0.28 16 11 C -0.67 0.96 5.11 37.16 0.19 1.15 16 12 S 2.59 5.23 4.92 -107.50 -0.53 4.70 16 13 O -0.91 -4.26 17.96 -67.04 -1.20 -5.46 16 14 O -0.93 -3.93 15.82 -67.03 -1.06 -4.99 16 15 O -0.66 -1.04 10.05 -51.76 -0.52 -1.56 16 16 C 0.06 0.05 4.80 -39.22 -0.19 -0.14 16 17 C -0.11 0.11 8.09 -39.43 -0.32 -0.21 16 18 C -0.10 0.20 5.35 -104.65 -0.56 -0.36 16 19 C -0.08 0.20 2.80 36.01 0.10 0.30 16 20 O -0.53 0.62 12.83 -35.23 -0.45 0.17 16 21 Si 0.69 -2.07 29.88 -169.99 -5.08 -7.15 16 22 C -0.10 0.26 8.67 -39.56 -0.34 -0.09 16 23 C -0.09 0.19 10.04 -39.60 -0.40 -0.21 16 24 C -0.08 -0.01 9.05 -39.43 -0.36 -0.36 16 25 C -0.12 0.13 6.86 -25.90 -0.18 -0.05 16 26 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 30 H 0.07 0.01 8.13 -51.93 -0.42 -0.42 16 31 H 0.12 -0.19 7.99 -51.93 -0.41 -0.60 16 32 H 0.11 -0.11 8.14 -51.93 -0.42 -0.54 16 33 H 0.15 -0.48 6.58 -51.92 -0.34 -0.82 16 34 H 0.16 -0.67 8.05 -51.93 -0.42 -1.09 16 35 H 0.14 -0.41 7.47 -52.49 -0.39 -0.80 16 36 H 0.12 -0.42 7.96 -51.93 -0.41 -0.83 16 37 H 0.38 -1.45 8.70 45.56 0.40 -1.06 16 38 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 39 H -0.26 0.33 7.01 56.52 0.40 0.73 16 40 H 0.14 -0.65 4.84 -52.49 -0.25 -0.91 16 41 H 0.15 -0.68 8.06 -52.49 -0.42 -1.10 16 42 H 0.15 -0.10 8.06 -52.49 -0.42 -0.53 16 43 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 44 H 0.12 -0.15 7.40 -51.92 -0.38 -0.53 16 LS Contribution 385.61 15.07 5.81 5.81 Total: 0.00 -11.16 385.61 -11.22 -22.38 By element: Atomic # 1 Polarization: -6.03 SS G_CDS: -5.65 Total: -11.69 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: -1.88 Total: 1.40 kcal Atomic # 8 Polarization: -11.25 SS G_CDS: -3.93 Total: -15.19 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.28 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: -5.08 Total: -7.15 kcal Atomic # 16 Polarization: 5.23 SS G_CDS: -0.53 Total: 4.70 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -11.16 -11.22 -22.38 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79615_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -178.947 kcal (2) G-P(sol) polarization free energy of solvation -11.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -190.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.217 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.375 kcal (6) G-S(sol) free energy of system = (1) + (5) -201.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds