Wall clock time and date at job start Mon Mar 8 2021 11:28:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45199 * 109.46836 * 2 1 4 4 C 1.34224 * 117.00086 * 179.97438 * 3 2 1 5 5 O 1.20829 * 119.99859 * 0.02562 * 4 3 2 6 6 C 1.50702 * 120.00470 * 180.02562 * 4 3 2 7 7 H 1.09005 * 112.90667 * 48.75083 * 6 4 3 8 8 C 1.53773 * 113.61789 * 180.02562 * 6 4 3 9 9 C 1.53784 * 87.08270 * 139.98207 * 8 6 4 10 10 F 1.39893 * 113.61284 * 89.20296 * 9 8 6 11 11 C 1.52999 * 113.61318 * 220.01686 * 9 8 6 12 12 S 1.81402 * 109.47106 * 179.97438 * 11 9 8 13 13 O 1.42096 * 110.53929 * 68.37676 * 12 11 9 14 14 O 1.42105 * 110.54122 * 291.62808 * 12 11 9 15 15 O 1.52195 * 104.45122 * 180.02562 * 12 11 9 16 16 C 1.36009 * 114.00142 * 74.99720 * 15 12 11 17 17 C 1.38603 * 120.07959 * 270.25248 * 16 15 12 18 18 Br 1.89092 * 120.00788 * 0.02562 * 17 16 15 19 19 C 1.38357 * 119.97966 * 180.27808 * 17 16 15 20 20 C 1.38203 * 120.14202 * 359.74633 * 19 17 16 21 21 C 1.50701 * 119.92996 * 179.97438 * 20 19 17 22 22 O 1.42897 * 109.47363 * 245.02528 * 21 20 19 23 23 Si 1.86305 * 109.46807 * 5.02119 * 21 20 19 24 24 C 1.38281 * 120.14987 * 359.97438 * 20 19 17 25 25 C 1.38546 * 120.01646 * 0.02659 * 24 20 19 26 26 O 1.35992 * 120.06962 * 179.97438 * 25 24 20 27 27 C 1.42905 * 116.99843 * 359.97438 * 26 25 24 28 28 C 1.53780 * 87.07866 * 334.56590 * 9 8 6 29 29 H 1.08997 * 109.47367 * 60.00091 * 1 2 3 30 30 H 1.09001 * 109.46799 * 179.97438 * 1 2 3 31 31 H 1.08995 * 109.47371 * 299.99959 * 1 2 3 32 32 H 1.09000 * 109.47008 * 240.00361 * 2 1 3 33 33 H 1.09000 * 109.46923 * 120.00154 * 2 1 3 34 34 H 1.09005 * 113.61667 * 25.43416 * 8 6 4 35 35 H 1.09002 * 113.69182 * 254.53964 * 8 6 4 36 36 H 1.09013 * 109.47047 * 60.00264 * 11 9 8 37 37 H 1.08993 * 109.47378 * 300.00198 * 11 9 8 38 38 H 1.08004 * 119.92744 * 179.72427 * 19 17 16 39 39 H 1.08997 * 109.47521 * 125.01907 * 21 20 19 40 40 H 0.96697 * 113.99754 * 179.97438 * 22 21 20 41 41 H 1.48499 * 110.00335 * 178.67830 * 23 21 20 42 42 H 1.48496 * 110.00097 * 300.00403 * 23 21 20 43 43 H 1.08005 * 119.98960 * 179.97438 * 24 20 19 44 44 H 1.09001 * 109.47103 * 60.00803 * 27 26 25 45 45 H 1.09004 * 109.47054 * 180.02562 * 27 26 25 46 46 H 1.09000 * 109.47187 * 300.00363 * 27 26 25 47 47 H 1.08999 * 113.61264 * 139.98172 * 28 9 8 48 48 H 1.08999 * 113.61773 * 270.88377 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9375 0.0012 7 1 3.4708 3.5824 0.7561 8 6 5.4581 2.9683 0.0011 9 6 5.3562 4.1431 -0.9859 10 9 5.2849 5.3937 -0.3631 11 6 6.3984 4.0954 -2.1051 12 16 6.1769 5.5255 -3.1989 13 8 6.5219 6.7275 -2.5241 14 8 4.9593 5.4154 -3.9232 15 8 7.2586 5.3651 -4.2576 16 6 6.9928 4.3998 -5.1782 17 6 7.4069 3.0957 -4.9567 18 35 8.3420 2.6565 -3.3729 19 6 7.1406 2.1166 -5.8972 20 6 6.4573 2.4346 -7.0557 21 6 6.1703 1.3645 -8.0772 22 8 6.8761 1.6569 -9.2848 23 14 6.7249 -0.2876 -7.4184 24 6 6.0365 3.7327 -7.2797 25 6 6.2999 4.7182 -6.3422 26 8 5.8870 5.9952 -6.5617 27 6 5.1870 6.2501 -7.7812 28 6 3.9861 3.5777 -1.3956 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 1.8933 -0.5138 -0.8900 33 1 1.8933 -0.5139 0.8900 34 1 5.9127 2.0754 -0.4283 35 1 5.8907 3.2426 0.9632 36 1 6.2738 3.1769 -2.6788 37 1 7.3982 4.1203 -1.6718 38 1 7.4675 1.1016 -5.7258 39 1 5.0998 1.3338 -8.2803 40 1 6.7378 1.0079 -9.9881 41 1 6.4184 -1.3560 -8.4031 42 1 8.1828 -0.2588 -7.1374 43 1 5.5032 3.9784 -8.1862 44 1 4.2842 5.6404 -7.8162 45 1 4.9157 7.3047 -7.8308 46 1 5.8275 5.9999 -8.6269 47 1 3.2290 4.3443 -1.5604 48 1 4.0382 2.8515 -2.2067 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79621_16464788.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:28:34 Heat of formation + Delta-G solvation = -210.479116 kcal Electronic energy + Delta-G solvation = -41309.344015 eV Core-core repulsion = 35616.155984 eV Total energy + Delta-G solvation = -5693.188031 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 483.027 amu Computer time = 3.12 seconds Orbital eigenvalues (eV) -49.11141 -42.72154 -41.77068 -40.46696 -39.41640 -39.32862 -38.21735 -37.70864 -37.42707 -37.09241 -34.08320 -32.83673 -32.32186 -31.92436 -30.69950 -28.82164 -27.37150 -27.19631 -26.93289 -24.11261 -23.82972 -23.54743 -22.34748 -21.72884 -20.89213 -19.84862 -19.29060 -19.05475 -18.88165 -18.77990 -18.52347 -17.89677 -17.64393 -17.60411 -17.19402 -16.91461 -16.77472 -16.53534 -16.24731 -16.16243 -16.04604 -15.63630 -15.44306 -15.35770 -14.79177 -14.68733 -14.67304 -14.48781 -14.37624 -14.16127 -14.03990 -13.81893 -13.74032 -13.53989 -13.19657 -13.17505 -13.11713 -13.09008 -13.07320 -12.97036 -12.92993 -12.63831 -12.58486 -12.55434 -12.52846 -12.05487 -11.91575 -11.73865 -11.59856 -11.54648 -11.33231 -11.20784 -10.83685 -10.22664 -9.71197 -5.20475 -1.25929 -0.54986 -0.28972 -0.13534 0.89143 0.95431 1.08617 1.36624 1.56113 1.71545 1.80680 1.87100 2.43746 2.60946 2.71935 2.81276 2.82672 2.91316 3.13038 3.21507 3.27809 3.32497 3.37180 3.60226 3.64928 3.69954 3.80270 3.92244 3.92607 3.97026 4.01851 4.06579 4.08258 4.19240 4.26171 4.27856 4.29777 4.34659 4.41207 4.46640 4.56756 4.61477 4.64362 4.69423 4.78249 4.79645 4.90717 4.97862 5.00042 5.41761 5.88524 6.12878 6.68940 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.354 6.354 4 C 0.476 3.524 5 O -0.501 6.501 6 C -0.109 4.109 7 H 0.138 0.862 8 C -0.121 4.121 9 C 0.104 3.896 10 F -0.171 7.171 11 C -0.682 4.682 12 S 2.588 3.412 13 O -0.903 6.903 14 O -0.931 6.931 15 O -0.641 6.641 16 C 0.059 3.941 17 C -0.073 4.073 18 Br -0.002 7.002 19 C -0.109 4.109 20 C -0.006 4.006 21 C -0.080 4.080 22 O -0.532 6.532 23 Si 0.678 3.322 24 C -0.151 4.151 25 C 0.176 3.824 26 O -0.292 6.292 27 C 0.020 3.980 28 C -0.143 4.143 29 H 0.068 0.932 30 H 0.081 0.919 31 H 0.068 0.932 32 H 0.072 0.928 33 H 0.071 0.929 34 H 0.122 0.878 35 H 0.101 0.899 36 H 0.158 0.842 37 H 0.158 0.842 38 H 0.155 0.845 39 H 0.090 0.910 40 H 0.387 0.613 41 H -0.252 1.252 42 H -0.246 1.246 43 H 0.157 0.843 44 H 0.067 0.933 45 H 0.112 0.888 46 H 0.064 0.936 47 H 0.109 0.891 48 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.633 -6.271 -3.799 8.673 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.389 6.389 6 C -0.128 4.128 7 H 0.155 0.845 8 C -0.159 4.159 9 C 0.084 3.916 10 F -0.151 7.151 11 C -0.807 4.807 12 S 2.681 3.319 13 O -0.901 6.901 14 O -0.930 6.930 15 O -0.600 6.600 16 C 0.014 3.986 17 C -0.154 4.154 18 Br 0.084 6.916 19 C -0.129 4.129 20 C -0.008 4.008 21 C -0.190 4.190 22 O -0.340 6.340 23 Si 0.578 3.422 24 C -0.171 4.171 25 C 0.126 3.874 26 O -0.203 6.203 27 C -0.075 4.075 28 C -0.180 4.180 29 H 0.087 0.913 30 H 0.100 0.900 31 H 0.087 0.913 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.140 0.860 35 H 0.120 0.880 36 H 0.176 0.824 37 H 0.176 0.824 38 H 0.172 0.828 39 H 0.108 0.892 40 H 0.235 0.765 41 H -0.176 1.176 42 H -0.170 1.170 43 H 0.174 0.826 44 H 0.085 0.915 45 H 0.131 0.869 46 H 0.083 0.917 47 H 0.128 0.872 48 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -3.416 -5.982 -3.081 7.547 hybrid contribution 0.127 -0.310 -1.202 1.248 sum -3.289 -6.293 -4.284 8.293 Atomic orbital electron populations 1.21827 0.92283 1.03278 1.03757 1.23114 0.95668 0.79690 1.02822 1.86523 1.24084 1.32884 1.83541 1.23220 0.80846 0.91831 0.72299 1.90688 1.60509 1.42685 1.44998 1.22482 0.97219 0.92051 1.01075 0.84454 1.23579 0.93675 0.97856 1.00774 1.21208 0.95354 0.82125 0.92899 1.93008 1.97016 1.41577 1.83537 1.32199 1.09450 1.24940 1.14087 1.05950 0.74059 0.76619 0.75320 1.93682 1.82110 1.40075 1.74202 1.93656 1.45503 1.86737 1.67065 1.85817 1.67477 1.58523 1.48136 1.16741 1.06879 0.84647 0.90373 1.21746 1.02940 0.93233 0.97512 1.96861 1.74119 1.93467 1.27132 1.20793 1.00015 0.99111 0.92941 1.19203 0.94491 0.93894 0.93244 1.24817 1.00193 1.06120 0.87830 1.86574 1.72014 1.52422 1.23021 0.95019 0.84126 0.74427 0.88632 1.21257 1.04029 0.91819 0.99954 1.18783 0.91382 0.85661 0.91613 1.86220 1.69697 1.22710 1.41681 1.23355 0.96037 1.04245 0.83830 1.23767 0.96059 1.01768 0.96429 0.91286 0.89984 0.91339 0.90951 0.91032 0.85998 0.88041 0.82440 0.82413 0.82760 0.89244 0.76458 1.17629 1.17037 0.82575 0.91453 0.86942 0.91716 0.87209 0.86614 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.35 10.29 37.16 0.38 0.74 16 2 C 0.06 -0.04 6.19 37.16 0.23 0.19 16 3 O -0.35 -0.31 10.22 -39.24 -0.40 -0.71 16 4 C 0.48 0.50 7.48 36.01 0.27 0.77 16 5 O -0.50 -1.62 15.65 -18.75 -0.29 -1.91 16 6 C -0.11 0.09 4.24 -90.96 -0.39 -0.30 16 7 H 0.14 -0.30 8.14 -51.93 -0.42 -0.72 16 8 C -0.12 0.12 6.86 -25.92 -0.18 -0.06 16 9 C 0.10 0.04 1.62 -89.81 -0.15 -0.11 16 10 F -0.17 -0.47 16.28 2.25 0.04 -0.43 16 11 C -0.68 -0.20 3.53 37.16 0.13 -0.07 16 12 S 2.59 10.44 4.89 -107.50 -0.53 9.91 16 13 O -0.90 -6.80 17.54 -67.03 -1.18 -7.98 16 14 O -0.93 -4.27 15.81 -68.54 -1.08 -5.36 16 15 O -0.64 -2.57 9.28 -54.27 -0.50 -3.08 16 16 C 0.06 0.16 4.81 -39.10 -0.19 -0.03 16 17 C -0.07 -0.04 5.55 -39.40 -0.22 -0.26 16 18 Br 0.00 0.00 27.48 -68.01 -1.87 -1.87 16 19 C -0.11 0.10 8.40 -39.55 -0.33 -0.24 16 20 C -0.01 0.01 5.38 -104.62 -0.56 -0.56 16 21 C -0.08 0.23 2.79 36.01 0.10 0.33 16 22 O -0.53 0.96 12.81 -35.23 -0.45 0.51 16 23 Si 0.68 -2.14 29.84 -169.99 -5.07 -7.22 16 24 C -0.15 0.05 8.67 -39.45 -0.34 -0.29 16 25 C 0.18 0.38 5.93 -39.12 -0.23 0.15 16 26 O -0.29 -0.80 9.73 -41.52 -0.40 -1.20 16 27 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 28 C -0.14 0.13 7.08 -25.92 -0.18 -0.06 16 29 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 30 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 31 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.07 -0.07 8.13 -51.93 -0.42 -0.50 16 33 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 34 H 0.12 -0.17 7.39 -51.93 -0.38 -0.56 16 35 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 36 H 0.16 -0.29 5.14 -51.92 -0.27 -0.55 16 37 H 0.16 -0.18 6.77 -51.93 -0.35 -0.53 16 38 H 0.16 -0.44 4.85 -52.48 -0.25 -0.70 16 39 H 0.09 -0.46 7.96 -51.93 -0.41 -0.87 16 40 H 0.39 -2.19 8.74 45.56 0.40 -1.79 16 41 H -0.25 0.31 7.11 56.52 0.40 0.71 16 42 H -0.25 0.05 7.04 56.52 0.40 0.45 16 43 H 0.16 -0.41 6.30 -52.48 -0.33 -0.74 16 44 H 0.07 -0.22 7.66 -51.93 -0.40 -0.61 16 45 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 46 H 0.06 -0.21 7.66 -51.93 -0.40 -0.60 16 47 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 48 H 0.12 -0.27 7.91 -51.93 -0.41 -0.68 16 LS Contribution 425.98 15.07 6.42 6.42 Total: 0.00 -11.89 425.98 -11.80 -23.69 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -5.81 Total: -11.95 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -0.66 Total: 1.17 kcal Atomic # 8 Polarization: -15.42 SS G_CDS: -4.31 Total: -19.73 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: -2.14 SS G_CDS: -5.07 Total: -7.22 kcal Atomic # 16 Polarization: 10.44 SS G_CDS: -0.53 Total: 9.91 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -1.87 Total: -1.87 kcal Total LS contribution 6.42 Total: 6.42 kcal Total: -11.89 -11.80 -23.69 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79621_16464788.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -186.788 kcal (2) G-P(sol) polarization free energy of solvation -11.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.677 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.803 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.691 kcal (6) G-S(sol) free energy of system = (1) + (5) -210.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.12 seconds