Wall clock time and date at job start Mon Mar 8 2021 12:21:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.42897 * 109.46948 * 2 1 4 4 C 1.35998 * 117.00120 * 180.02562 * 3 2 1 5 5 C 1.38543 * 120.06665 * 0.27599 * 4 3 2 6 6 C 1.38282 * 120.01560 * 180.25466 * 5 4 3 7 7 C 1.50696 * 119.92601 * 179.72383 * 6 5 4 8 8 O 1.42904 * 109.47043 * 300.01944 * 7 6 5 9 9 Si 1.86306 * 109.47167 * 180.02562 * 7 6 5 10 10 H 1.48497 * 109.46936 * 60.00141 * 9 7 6 11 11 H 1.48501 * 109.47004 * 179.97438 * 9 7 6 12 12 H 1.48499 * 109.46943 * 300.00070 * 9 7 6 13 13 C 1.38212 * 120.15051 * 359.74607 * 6 5 4 14 14 C 1.38355 * 120.13706 * 359.97438 * 13 6 5 15 15 Br 1.89102 * 120.01040 * 180.02562 * 14 13 6 16 16 C 1.38611 * 119.98314 * 0.02562 * 14 13 6 17 17 O 1.36011 * 120.07252 * 179.97438 * 16 14 13 18 18 S 1.52200 * 113.99909 * 90.00240 * 17 16 14 19 19 O 1.42096 * 104.27696 * 318.92761 * 18 17 16 20 20 O 1.42097 * 104.27816 * 191.06607 * 18 17 16 21 21 C 1.81399 * 104.44943 * 74.99710 * 18 17 16 22 22 C 1.53002 * 109.47162 * 180.02562 * 21 18 17 23 23 C 1.53006 * 109.46974 * 179.97438 * 22 21 18 24 24 Si 1.86299 * 109.46797 * 179.97438 * 23 22 21 25 25 C 1.86301 * 109.47106 * 60.00209 * 24 23 22 26 26 C 1.86300 * 109.46875 * 180.02562 * 24 23 22 27 27 C 1.86300 * 109.47459 * 299.99993 * 24 23 22 28 28 H 1.09004 * 109.47093 * 299.99460 * 1 2 3 29 29 H 1.08998 * 109.47176 * 60.00224 * 1 2 3 30 30 H 1.09005 * 109.46460 * 180.02562 * 1 2 3 31 31 H 1.09000 * 109.47215 * 240.00051 * 2 1 3 32 32 H 1.08999 * 109.47559 * 120.00145 * 2 1 3 33 33 H 1.08006 * 119.99409 * 359.97438 * 5 4 3 34 34 H 1.09000 * 109.47191 * 60.02196 * 7 6 5 35 35 H 0.96697 * 114.00298 * 300.00350 * 8 7 6 36 36 H 1.08003 * 119.93127 * 179.97438 * 13 6 5 37 37 H 1.09004 * 109.47089 * 299.99831 * 21 18 17 38 38 H 1.09004 * 109.47568 * 59.99841 * 21 18 17 39 39 H 1.09000 * 109.46497 * 299.99702 * 22 21 18 40 40 H 1.08996 * 109.46876 * 60.00092 * 22 21 18 41 41 H 1.08993 * 109.46955 * 300.00073 * 23 22 21 42 42 H 1.09000 * 109.47050 * 59.99902 * 23 22 21 43 43 H 1.08996 * 109.46889 * 59.99853 * 25 24 23 44 44 H 1.09001 * 109.46900 * 179.97438 * 25 24 23 45 45 H 1.09002 * 109.47148 * 299.99722 * 25 24 23 46 46 H 1.09000 * 109.47204 * 59.99997 * 26 24 23 47 47 H 1.09001 * 109.47076 * 180.02562 * 26 24 23 48 48 H 1.09000 * 109.47148 * 299.99444 * 26 24 23 49 49 H 1.09002 * 109.46724 * 59.99677 * 27 24 23 50 50 H 1.08988 * 109.47614 * 179.97438 * 27 24 23 51 51 H 1.09000 * 109.47108 * 300.00303 * 27 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3545 1.5255 -0.0005 5 6 4.1998 0.4278 -0.0068 6 6 5.5705 0.6103 -0.0021 7 6 6.4881 -0.5851 -0.0026 8 8 6.2398 -1.3767 1.1609 9 14 8.2596 -0.0083 0.0053 10 1 8.5093 0.8067 1.2212 11 1 9.1637 -1.1864 0.0054 12 1 8.5176 0.8144 -1.2037 13 6 6.1010 1.8865 0.0037 14 6 5.2627 2.9872 0.0042 15 35 5.9923 4.7318 0.0113 16 6 3.8878 2.8108 -0.0006 17 8 3.0620 3.8916 0.0004 18 16 2.6904 4.3879 -1.3896 19 8 3.9008 4.2993 -2.1286 20 8 2.0636 5.6419 -1.1579 21 6 1.4844 3.1759 -1.9956 22 6 1.0292 3.5689 -3.4024 23 6 0.0125 2.5462 -3.9138 24 14 -0.5423 3.0252 -5.6265 25 6 0.9293 3.0623 -6.7684 26 6 -1.7808 1.7804 -6.2489 27 6 -1.3308 4.7123 -5.5748 28 1 -0.3633 0.5138 0.8901 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3632 -1.0278 0.0005 31 1 1.8933 -0.5138 -0.8900 32 1 1.8934 -0.5138 0.8899 33 1 3.7881 -0.5707 -0.0109 34 1 6.3047 -1.1835 -0.8951 35 1 6.3832 -0.9073 1.9940 36 1 7.1721 2.0249 0.0078 37 1 1.9454 2.1886 -2.0258 38 1 0.6235 3.1545 -1.3274 39 1 0.5684 4.5562 -3.3725 40 1 1.8903 3.5898 -4.0703 41 1 0.4737 1.5591 -3.9436 42 1 -0.8486 2.5248 -3.2460 43 1 1.3906 2.0752 -6.7986 44 1 0.6046 3.3421 -7.7706 45 1 1.6536 3.7908 -6.4041 46 1 -2.6418 1.7592 -5.5807 47 1 -2.1051 2.0604 -7.2512 48 1 -1.3199 0.7932 -6.2792 49 1 -0.6065 5.4408 -5.2104 50 1 -1.6550 4.9928 -6.5769 51 1 -2.1918 4.6907 -4.9068 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79967_14927650.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:21:39 Heat of formation + Delta-G solvation = -187.233122 kcal Electronic energy + Delta-G solvation = -34666.952380 eV Core-core repulsion = 30057.836290 eV Total energy + Delta-G solvation = -4609.116090 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 454.053 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.72501 -40.55251 -39.60059 -38.14528 -37.51272 -37.03214 -35.91644 -33.62189 -33.29740 -31.45176 -30.50665 -29.75032 -28.53305 -28.44792 -28.33824 -27.38180 -25.37615 -23.72156 -23.32251 -22.88746 -21.55117 -19.82175 -19.29488 -18.85462 -18.71667 -18.19806 -17.49111 -17.26989 -16.87592 -16.53340 -16.30086 -16.12745 -15.62405 -15.39160 -15.07608 -14.85387 -14.77817 -14.48373 -14.28107 -14.17314 -14.10856 -13.90447 -13.86473 -13.83599 -13.63283 -13.55020 -13.46112 -13.29234 -13.19436 -13.13583 -13.11566 -13.08311 -13.07030 -12.97094 -12.73108 -12.46329 -12.32206 -12.25424 -11.97133 -11.88369 -11.78133 -11.68786 -11.42491 -10.87643 -10.83901 -10.76177 -10.57914 -10.07150 -9.77317 -1.10356 -0.41284 -0.30711 0.21975 0.89725 1.01043 1.28628 1.35781 1.60549 1.69512 1.76693 1.80643 1.81913 1.87483 2.54433 2.65941 2.91114 3.02855 3.21261 3.29943 3.41930 3.55026 3.62926 3.65180 3.66404 3.70450 3.81010 3.98257 4.03722 4.16672 4.24486 4.29919 4.39641 4.43122 4.56550 4.58193 4.64298 4.66649 4.67346 4.72119 4.72929 4.73223 4.74643 4.77717 4.78083 4.86968 4.90485 4.97464 5.23278 5.42339 5.51207 5.53946 5.76456 6.25460 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.047 3.953 3 O -0.305 6.305 4 C 0.136 3.864 5 C -0.153 4.153 6 C -0.056 4.056 7 C -0.083 4.083 8 O -0.533 6.533 9 Si 0.935 3.065 10 H -0.243 1.243 11 H -0.245 1.245 12 H -0.241 1.241 13 C -0.122 4.122 14 C -0.026 4.026 15 Br 0.004 6.996 16 C 0.064 3.936 17 O -0.646 6.646 18 S 2.571 3.429 19 O -0.941 6.941 20 O -0.921 6.921 21 C -0.635 4.635 22 C -0.102 4.102 23 C -0.402 4.402 24 Si 1.000 3.000 25 C -0.453 4.453 26 C -0.448 4.448 27 C -0.454 4.454 28 H 0.071 0.929 29 H 0.070 0.930 30 H 0.085 0.915 31 H 0.072 0.928 32 H 0.074 0.926 33 H 0.158 0.842 34 H 0.130 0.870 35 H 0.380 0.620 36 H 0.147 0.853 37 H 0.134 0.866 38 H 0.141 0.859 39 H 0.081 0.919 40 H 0.081 0.919 41 H 0.079 0.921 42 H 0.081 0.919 43 H 0.069 0.931 44 H 0.070 0.930 45 H 0.070 0.930 46 H 0.068 0.932 47 H 0.069 0.931 48 H 0.068 0.932 49 H 0.070 0.930 50 H 0.070 0.930 51 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.211 -7.481 -0.436 7.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.027 4.027 3 O -0.219 6.219 4 C 0.087 3.913 5 C -0.173 4.173 6 C -0.058 4.058 7 C -0.193 4.193 8 O -0.338 6.338 9 Si 0.756 3.244 10 H -0.166 1.166 11 H -0.168 1.168 12 H -0.164 1.164 13 C -0.141 4.141 14 C -0.108 4.108 15 Br 0.091 6.909 16 C 0.019 3.981 17 O -0.604 6.604 18 S 2.668 3.332 19 O -0.940 6.940 20 O -0.919 6.919 21 C -0.763 4.763 22 C -0.140 4.140 23 C -0.488 4.488 24 Si 1.197 2.803 25 C -0.560 4.560 26 C -0.556 4.556 27 C -0.561 4.561 28 H 0.090 0.910 29 H 0.089 0.911 30 H 0.104 0.896 31 H 0.090 0.910 32 H 0.092 0.908 33 H 0.175 0.825 34 H 0.147 0.853 35 H 0.228 0.772 36 H 0.165 0.835 37 H 0.152 0.848 38 H 0.159 0.841 39 H 0.099 0.901 40 H 0.099 0.901 41 H 0.098 0.902 42 H 0.100 0.900 43 H 0.088 0.912 44 H 0.089 0.911 45 H 0.089 0.911 46 H 0.087 0.913 47 H 0.088 0.912 48 H 0.087 0.913 49 H 0.089 0.911 50 H 0.089 0.911 51 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -0.036 -6.150 -0.633 6.182 hybrid contribution -1.088 -0.640 0.373 1.316 sum -1.124 -6.790 -0.261 6.887 Atomic orbital electron populations 1.21849 0.91724 1.03713 1.04098 1.23084 0.96723 0.80354 1.02522 1.86212 1.16752 1.31317 1.87611 1.18845 0.84285 0.91621 0.96559 1.21157 0.92782 0.98464 1.04851 1.20371 0.94583 0.94661 0.96200 1.25072 1.08077 0.93336 0.92827 1.86541 1.92113 1.39851 1.15300 0.85851 0.74744 0.80952 0.82897 1.16638 1.16824 1.16395 1.20925 1.00216 0.90265 1.02737 1.21764 0.92062 0.94580 1.02405 1.96898 1.83339 1.13966 1.96728 1.16781 0.86750 0.81265 1.13344 1.85777 1.67101 1.49712 1.57850 1.06312 0.76621 0.76687 0.73598 1.93691 1.41471 1.86826 1.71972 1.93654 1.78275 1.37724 1.82245 1.30875 1.18547 1.18264 1.08583 1.20992 1.00657 1.00640 0.91745 1.26143 1.02591 1.02245 1.17853 0.79359 0.67286 0.67384 0.66286 1.26170 1.14618 1.04554 1.10689 1.26097 1.11560 1.11585 1.06341 1.26176 1.07519 1.17804 1.04615 0.91033 0.91060 0.89600 0.90999 0.90793 0.82462 0.85250 0.77196 0.83517 0.84764 0.84087 0.90058 0.90053 0.90192 0.90026 0.91207 0.91119 0.91077 0.91251 0.91151 0.91299 0.91079 0.91120 0.91138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.64 10.28 37.16 0.38 1.02 16 2 C 0.05 -0.17 5.46 37.16 0.20 0.03 16 3 O -0.31 0.26 7.18 -34.23 -0.25 0.02 16 4 C 0.14 0.03 5.83 -39.13 -0.23 -0.20 16 5 C -0.15 0.26 8.60 -39.45 -0.34 -0.08 16 6 C -0.06 0.08 5.39 -104.62 -0.56 -0.48 16 7 C -0.08 0.25 2.82 36.00 0.10 0.35 16 8 O -0.53 1.40 12.77 -35.23 -0.45 0.95 16 9 Si 0.93 -2.07 25.06 -169.99 -4.26 -6.33 16 10 H -0.24 0.49 7.11 56.52 0.40 0.89 16 11 H -0.24 0.22 7.11 56.52 0.40 0.62 16 12 H -0.24 0.35 7.11 56.52 0.40 0.75 16 13 C -0.12 -0.03 8.40 -39.55 -0.33 -0.36 16 14 C -0.03 -0.07 5.58 -39.40 -0.22 -0.29 16 15 Br 0.00 0.02 31.62 -68.01 -2.15 -2.14 16 16 C 0.06 0.17 4.80 -39.10 -0.19 -0.01 16 17 O -0.65 -2.61 9.19 -54.27 -0.50 -3.11 16 18 S 2.57 10.04 5.10 -107.50 -0.55 9.49 16 19 O -0.94 -4.76 14.93 -67.04 -1.00 -5.76 16 20 O -0.92 -6.48 18.09 -67.04 -1.21 -7.69 16 21 C -0.63 0.02 4.53 37.16 0.17 0.19 16 22 C -0.10 0.07 4.59 -26.73 -0.12 -0.05 16 23 C -0.40 0.99 4.45 37.16 0.17 1.15 16 24 Si 1.00 -2.87 12.19 -169.99 -2.07 -4.94 16 25 C -0.45 0.68 8.65 101.05 0.87 1.56 16 26 C -0.45 0.90 8.65 101.05 0.87 1.77 16 27 C -0.45 0.59 8.65 101.05 0.87 1.46 16 28 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 29 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 30 H 0.09 -0.45 8.14 -51.93 -0.42 -0.88 16 31 H 0.07 -0.37 7.65 -51.93 -0.40 -0.77 16 32 H 0.07 -0.33 7.68 -51.93 -0.40 -0.73 16 33 H 0.16 -0.63 6.30 -52.48 -0.33 -0.96 16 34 H 0.13 -0.57 7.96 -51.93 -0.41 -0.98 16 35 H 0.38 -2.11 8.70 45.56 0.40 -1.71 16 36 H 0.15 -0.16 4.87 -52.48 -0.26 -0.41 16 37 H 0.13 -0.20 6.03 -51.92 -0.31 -0.52 16 38 H 0.14 -0.19 8.10 -51.92 -0.42 -0.61 16 39 H 0.08 -0.09 7.79 -51.93 -0.40 -0.50 16 40 H 0.08 -0.12 7.79 -51.93 -0.40 -0.53 16 41 H 0.08 -0.26 7.96 -51.93 -0.41 -0.67 16 42 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 43 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 44 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 45 H 0.07 -0.09 7.79 -51.93 -0.40 -0.49 16 46 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 47 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 48 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 49 H 0.07 -0.07 7.79 -51.93 -0.40 -0.48 16 50 H 0.07 -0.08 7.96 -51.94 -0.41 -0.50 16 51 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 LS Contribution 438.70 15.07 6.61 6.61 Total: 0.00 -8.81 438.70 -11.72 -20.52 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -7.54 Total: -13.68 kcal Atomic # 6 Polarization: 4.40 SS G_CDS: 1.65 Total: 6.05 kcal Atomic # 8 Polarization: -12.18 SS G_CDS: -3.41 Total: -15.59 kcal Atomic # 14 Polarization: -4.94 SS G_CDS: -6.33 Total: -11.28 kcal Atomic # 16 Polarization: 10.04 SS G_CDS: -0.55 Total: 9.49 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.15 Total: -2.14 kcal Total LS contribution 6.61 Total: 6.61 kcal Total: -8.81 -11.72 -20.52 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79967_14927650.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.710 kcal (2) G-P(sol) polarization free energy of solvation -8.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.517 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.716 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.523 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds