Wall clock time and date at job start Mon Mar 8 2021 12:59:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45199 * 109.47057 * 2 1 4 4 C 1.34232 * 116.99330 * 179.97438 * 3 2 1 5 5 O 1.20823 * 120.00389 * 0.02562 * 4 3 2 6 6 C 1.50699 * 119.99567 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.90791 * 311.25185 * 6 4 3 8 8 C 1.53779 * 113.61429 * 82.50513 * 6 4 3 9 9 C 1.53779 * 87.08402 * 139.98140 * 8 6 4 10 10 F 1.39903 * 113.61445 * 220.02294 * 9 8 6 11 11 C 1.52998 * 113.69187 * 89.12587 * 9 8 6 12 12 S 1.81401 * 109.47076 * 82.46915 * 11 9 8 13 13 O 1.42098 * 110.53994 * 291.62329 * 12 11 9 14 14 O 1.42098 * 110.54382 * 68.37453 * 12 11 9 15 15 O 1.52200 * 104.44973 * 180.02562 * 12 11 9 16 16 C 1.36015 * 114.00210 * 74.99441 * 15 12 11 17 17 C 1.39111 * 120.07575 * 269.72493 * 16 15 12 18 18 O 1.35994 * 120.07068 * 0.02562 * 17 16 15 19 19 C 1.42900 * 116.99934 * 179.97438 * 18 17 16 20 20 C 1.52996 * 109.47172 * 180.02562 * 19 18 17 21 21 C 1.38589 * 119.86099 * 179.79191 * 17 16 15 22 22 C 1.38242 * 120.01538 * 0.48367 * 21 17 16 23 23 C 1.50694 * 119.92251 * 179.72391 * 22 21 17 24 24 O 1.42903 * 109.47478 * 65.02512 * 23 22 21 25 25 Si 1.86301 * 109.47070 * 185.02514 * 23 22 21 26 26 C 1.38251 * 120.14938 * 359.74896 * 22 21 17 27 27 C 1.38313 * 120.13964 * 0.02562 * 26 22 21 28 28 Br 1.89101 * 120.01062 * 180.02562 * 27 26 22 29 29 C 1.53784 * 113.61308 * 180.02562 * 6 4 3 30 30 H 1.09004 * 109.47629 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.47289 * 300.00290 * 1 2 3 32 32 H 1.09004 * 109.47368 * 60.00138 * 1 2 3 33 33 H 1.08995 * 109.46787 * 239.99688 * 2 1 3 34 34 H 1.08999 * 109.46928 * 120.00440 * 2 1 3 35 35 H 1.09006 * 113.61307 * 25.43343 * 8 6 4 36 36 H 1.09007 * 113.61642 * 254.53100 * 8 6 4 37 37 H 1.09005 * 109.46827 * 202.46552 * 11 9 8 38 38 H 1.08994 * 109.46980 * 322.46514 * 11 9 8 39 39 H 1.08995 * 109.47515 * 300.00516 * 19 18 17 40 40 H 1.09001 * 109.46839 * 60.00426 * 19 18 17 41 41 H 1.09001 * 109.46893 * 60.00456 * 20 19 18 42 42 H 1.08997 * 109.47719 * 180.02562 * 20 19 18 43 43 H 1.09003 * 109.47587 * 300.00785 * 20 19 18 44 44 H 1.07996 * 119.99575 * 180.23218 * 21 17 16 45 45 H 1.08999 * 109.47457 * 305.01888 * 23 22 21 46 46 H 0.96698 * 113.99846 * 179.97438 * 24 23 22 47 47 H 1.48505 * 109.99936 * 300.00208 * 25 23 22 48 48 H 1.48503 * 110.00296 * 61.31377 * 25 23 22 49 49 H 1.08007 * 119.92883 * 179.97438 * 26 22 21 50 50 H 1.09004 * 113.61451 * 105.47354 * 29 6 4 51 51 H 1.08994 * 113.61477 * 334.56656 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9208 2.9372 0.0000 7 1 3.4716 3.5819 -0.7555 8 6 3.9858 3.5775 1.3966 9 6 5.3561 4.1429 0.9876 10 9 6.3086 4.0992 2.0113 11 6 5.2784 5.5105 0.3062 12 16 5.1617 6.8088 1.5678 13 8 3.9111 6.7408 2.2389 14 8 6.3787 6.9087 2.2945 15 8 5.0908 8.1051 0.7733 16 6 3.8854 8.3273 0.1837 17 6 3.6437 7.8633 -1.1053 18 8 4.6120 7.1859 -1.7784 19 6 4.2932 6.7387 -3.0977 20 6 5.4958 6.0022 -3.6910 21 6 2.4125 8.0885 -1.7002 22 6 1.4307 8.7816 -1.0170 23 6 0.0948 9.0307 -1.6682 24 8 -0.5722 7.7846 -1.8790 25 14 -0.9436 10.1114 -0.5616 26 6 1.6720 9.2472 0.2622 27 6 2.8969 9.0220 0.8638 28 35 3.2228 9.6599 2.6139 29 6 5.4583 2.9678 0.0001 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8899 32 1 -0.3634 0.5138 -0.8900 33 1 1.8933 -0.5139 -0.8899 34 1 1.8933 -0.5139 0.8899 35 1 4.0375 2.8514 2.2079 36 1 3.2286 4.3443 1.5612 37 1 6.1736 5.6680 -0.2955 38 1 4.3982 5.5472 -0.3355 39 1 3.4386 6.0635 -3.0559 40 1 4.0478 7.5972 -3.7229 41 1 5.7408 5.1437 -3.0657 42 1 5.2529 5.6615 -4.6975 43 1 6.3508 6.6770 -3.7328 44 1 2.2212 7.7259 -2.6994 45 1 0.2447 9.5292 -2.6259 46 1 -1.4408 7.8689 -2.2956 47 1 -1.1553 9.4431 0.7475 48 1 -0.2760 11.4225 -0.3603 49 1 0.9026 9.7888 0.7926 50 1 5.8897 3.2425 -0.9626 51 1 5.9128 2.0750 0.4294 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_79967_15494190.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:59:14 Heat of formation + Delta-G solvation = -226.856844 kcal Electronic energy + Delta-G solvation = -44463.465818 eV Core-core repulsion = 38614.029977 eV Total energy + Delta-G solvation = -5849.435841 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 497.042 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -49.18335 -42.88261 -41.96073 -40.64953 -39.66495 -39.43654 -38.60162 -37.64210 -37.48446 -37.35193 -33.76413 -33.18508 -32.77513 -31.65796 -31.41530 -30.65530 -27.40324 -27.31126 -27.17820 -25.25209 -24.05968 -23.58208 -23.20185 -22.47033 -21.87302 -20.56302 -20.05866 -19.63443 -19.17817 -18.87148 -18.78707 -18.33549 -18.11834 -17.79310 -17.49223 -17.31367 -17.16168 -16.96942 -16.61854 -16.20115 -16.16419 -15.88428 -15.56258 -15.53788 -15.13687 -14.92082 -14.88296 -14.53303 -14.42264 -14.30057 -14.25594 -14.15239 -13.88795 -13.76212 -13.70670 -13.68649 -13.58620 -13.44459 -13.38808 -13.08523 -13.00191 -12.96390 -12.79951 -12.57850 -12.56027 -12.50078 -12.29061 -12.17484 -12.11316 -12.02025 -11.77202 -11.62943 -11.59233 -11.55769 -11.51123 -10.43532 -10.16978 -9.82858 -4.97330 -1.46268 -0.58418 -0.42421 -0.00755 0.67780 0.94614 1.24323 1.50553 1.61498 1.65958 1.83022 1.99168 2.17704 2.49468 2.64711 2.67218 2.86681 3.00636 3.07686 3.19867 3.23059 3.29138 3.48421 3.59479 3.63452 3.78931 3.87376 3.95665 3.98385 4.02022 4.02458 4.07456 4.20112 4.21297 4.28108 4.31001 4.34349 4.38633 4.40131 4.47292 4.50763 4.53545 4.65949 4.69593 4.81451 4.84466 4.89437 4.94051 4.97856 5.02287 5.11834 5.31249 5.38318 5.86406 6.56319 6.92418 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.356 6.356 4 C 0.475 3.525 5 O -0.532 6.532 6 C -0.096 4.096 7 H 0.170 0.830 8 C -0.156 4.156 9 C 0.088 3.912 10 F -0.203 7.203 11 C -0.634 4.634 12 S 2.572 3.428 13 O -0.951 6.951 14 O -0.954 6.954 15 O -0.650 6.650 16 C 0.029 3.971 17 C 0.148 3.852 18 O -0.313 6.313 19 C 0.032 3.968 20 C -0.161 4.161 21 C -0.136 4.136 22 C -0.010 4.010 23 C -0.066 4.066 24 O -0.552 6.552 25 Si 0.746 3.254 26 C -0.134 4.134 27 C -0.043 4.043 28 Br -0.023 7.023 29 C -0.113 4.113 30 H 0.096 0.904 31 H 0.066 0.934 32 H 0.073 0.927 33 H 0.073 0.927 34 H 0.065 0.935 35 H 0.108 0.892 36 H 0.116 0.884 37 H 0.185 0.815 38 H 0.185 0.815 39 H 0.100 0.900 40 H 0.089 0.911 41 H 0.074 0.926 42 H 0.102 0.898 43 H 0.060 0.940 44 H 0.198 0.802 45 H 0.126 0.874 46 H 0.411 0.589 47 H -0.295 1.295 48 H -0.286 1.286 49 H 0.140 0.860 50 H 0.130 0.870 51 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.287 0.061 -14.847 18.062 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.273 6.273 4 C 0.319 3.681 5 O -0.421 6.421 6 C -0.115 4.115 7 H 0.188 0.812 8 C -0.194 4.194 9 C 0.068 3.932 10 F -0.184 7.184 11 C -0.763 4.763 12 S 2.670 3.330 13 O -0.950 6.950 14 O -0.952 6.952 15 O -0.608 6.608 16 C -0.016 4.016 17 C 0.098 3.902 18 O -0.227 6.227 19 C -0.042 4.042 20 C -0.218 4.218 21 C -0.155 4.155 22 C -0.012 4.012 23 C -0.177 4.177 24 O -0.363 6.363 25 Si 0.653 3.347 26 C -0.153 4.153 27 C -0.125 4.125 28 Br 0.063 6.937 29 C -0.152 4.152 30 H 0.114 0.886 31 H 0.085 0.915 32 H 0.092 0.908 33 H 0.092 0.908 34 H 0.083 0.917 35 H 0.126 0.874 36 H 0.134 0.866 37 H 0.203 0.797 38 H 0.203 0.797 39 H 0.118 0.882 40 H 0.107 0.893 41 H 0.093 0.907 42 H 0.120 0.880 43 H 0.079 0.921 44 H 0.215 0.785 45 H 0.144 0.856 46 H 0.263 0.737 47 H -0.223 1.223 48 H -0.213 1.213 49 H 0.157 0.843 50 H 0.149 0.851 51 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -9.092 0.602 -12.434 15.415 hybrid contribution 1.051 -0.609 0.084 1.218 sum -8.041 -0.007 -12.350 14.737 Atomic orbital electron populations 1.21833 0.90631 1.04281 1.03849 1.23296 0.96981 0.79123 1.02641 1.86523 1.23813 1.33675 1.83250 1.23593 0.80791 0.92323 0.71357 1.90693 1.61154 1.43920 1.46371 1.22407 0.97075 0.91099 1.00878 0.81246 1.23920 0.95825 1.02201 0.97408 1.21927 0.88783 0.94577 0.87888 1.92961 1.66820 1.97356 1.61223 1.31092 1.17276 1.09524 1.18376 1.06136 0.74456 0.75822 0.76543 1.93668 1.43835 1.84936 1.72526 1.93621 1.47877 1.84587 1.69160 1.85781 1.40496 1.60863 1.73669 1.17091 0.81849 1.09994 0.92643 1.18793 0.89806 0.92889 0.88674 1.86212 1.37345 1.67473 1.31646 1.23533 1.01414 1.00575 0.78629 1.21933 0.96857 1.00805 1.02237 1.21557 0.89537 1.00843 1.03535 1.19738 0.96385 0.93614 0.91445 1.24556 0.92146 0.93662 1.07356 1.86423 1.37828 1.26912 1.85142 0.94491 0.86357 0.75354 0.78497 1.20914 0.94774 1.03421 0.96217 1.21801 0.96123 1.01159 0.93462 1.96853 1.96237 1.85485 1.15122 1.23610 0.93822 0.96446 1.01300 0.88585 0.91527 0.90791 0.90839 0.91671 0.87352 0.86593 0.79728 0.79707 0.88185 0.89270 0.90740 0.87968 0.92119 0.78507 0.85640 0.73651 1.22319 1.21313 0.84253 0.85143 0.87645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.71 10.29 71.98 0.74 1.45 16 2 C 0.05 -0.02 6.19 71.98 0.45 0.43 16 3 O -0.36 -0.64 10.22 -51.44 -0.53 -1.17 16 4 C 0.48 1.22 7.48 71.24 0.53 1.76 16 5 O -0.53 -4.70 15.65 21.97 0.34 -4.36 16 6 C -0.10 0.34 3.91 -11.01 -0.04 0.29 16 7 H 0.17 -1.92 7.66 -2.39 -0.02 -1.94 16 8 C -0.16 -0.07 7.09 31.12 0.22 0.15 16 9 C 0.09 0.17 1.78 -10.25 -0.02 0.15 16 10 F -0.20 -2.05 16.31 44.97 0.73 -1.31 16 11 C -0.63 0.47 4.12 71.98 0.30 0.77 16 12 S 2.57 27.06 4.82 -56.49 -0.27 26.79 16 13 O -0.95 -12.06 14.34 -118.57 -1.70 -13.76 16 14 O -0.95 -18.25 17.54 -118.57 -2.08 -20.33 16 15 O -0.65 -6.35 9.19 -60.73 -0.56 -6.91 16 16 C 0.03 0.18 4.80 22.58 0.11 0.29 16 17 C 0.15 -0.28 5.83 22.56 0.13 -0.15 16 18 O -0.31 1.90 7.17 -79.60 -0.57 1.33 16 19 C 0.03 -0.42 5.46 71.98 0.39 -0.03 16 20 C -0.16 2.14 10.28 71.98 0.74 2.88 16 21 C -0.14 0.87 8.67 22.35 0.19 1.07 16 22 C -0.01 0.03 5.38 -19.86 -0.11 -0.08 16 23 C -0.07 0.63 2.79 71.23 0.20 0.83 16 24 O -0.55 5.83 12.81 -148.98 -1.91 3.92 16 25 Si 0.75 -4.76 29.84 68.60 2.05 -2.72 16 26 C -0.13 -0.49 8.40 22.29 0.19 -0.31 16 27 C -0.04 -0.35 5.58 22.38 0.12 -0.23 16 28 Br -0.02 -0.28 31.62 -20.37 -0.64 -0.92 16 29 C -0.11 0.29 6.89 31.14 0.21 0.50 16 30 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 31 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 32 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 33 H 0.07 -0.06 8.13 -2.39 -0.02 -0.08 16 34 H 0.06 0.05 8.13 -2.39 -0.02 0.04 16 35 H 0.11 0.19 8.09 -2.38 -0.02 0.18 16 36 H 0.12 -0.08 7.52 -2.38 -0.02 -0.10 16 37 H 0.19 -1.03 8.11 -2.39 -0.02 -1.05 16 38 H 0.19 -1.41 5.24 -2.39 -0.01 -1.43 16 39 H 0.10 -1.80 7.65 -2.39 -0.02 -1.82 16 40 H 0.09 -1.40 7.67 -2.39 -0.02 -1.42 16 41 H 0.07 -1.03 8.14 -2.39 -0.02 -1.05 16 42 H 0.10 -1.62 8.14 -2.39 -0.02 -1.64 16 43 H 0.06 -0.63 8.14 -2.39 -0.02 -0.64 16 44 H 0.20 -2.87 6.30 -2.91 -0.02 -2.89 16 45 H 0.13 -2.04 7.96 -2.39 -0.02 -2.06 16 46 H 0.41 -8.33 8.74 -74.06 -0.65 -8.97 16 47 H -0.30 -0.76 7.05 99.48 0.70 -0.05 16 48 H -0.29 0.01 7.11 99.48 0.71 0.72 16 49 H 0.14 0.53 4.85 -2.91 -0.01 0.52 16 50 H 0.13 -1.17 8.10 -2.39 -0.02 -1.19 16 51 H 0.11 0.14 7.43 -2.39 -0.02 0.12 16 Total: 0.00 -35.50 449.07 -0.38 -35.88 By element: Atomic # 1 Polarization: -26.60 SS G_CDS: 0.39 Total: -26.21 kcal Atomic # 6 Polarization: 5.40 SS G_CDS: 4.36 Total: 9.77 kcal Atomic # 8 Polarization: -34.27 SS G_CDS: -7.00 Total: -41.27 kcal Atomic # 9 Polarization: -2.05 SS G_CDS: 0.73 Total: -1.31 kcal Atomic # 14 Polarization: -4.76 SS G_CDS: 2.05 Total: -2.72 kcal Atomic # 16 Polarization: 27.06 SS G_CDS: -0.27 Total: 26.79 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.64 Total: -0.92 kcal Total: -35.50 -0.38 -35.88 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79967_15494190.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -190.977 kcal (2) G-P(sol) polarization free energy of solvation -35.497 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -226.474 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.879 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds