Wall clock time and date at job start Mon Mar 8 2021 13:50:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42895 * 109.47306 * 2 1 4 4 C 1.35993 * 117.00250 * 179.97438 * 3 2 1 5 5 C 1.39119 * 120.07194 * 180.02562 * 4 3 2 6 6 O 1.36018 * 120.07216 * 0.02562 * 5 4 3 7 7 S 1.52199 * 113.99967 * 269.72119 * 6 5 4 8 8 O 1.42094 * 104.27778 * 318.93334 * 7 6 5 9 9 O 1.42100 * 104.27640 * 191.07094 * 7 6 5 10 10 C 1.81403 * 104.44800 * 75.00262 * 7 6 5 11 11 C 1.53001 * 109.47032 * 179.97438 * 10 7 6 12 12 H 1.08998 * 112.85183 * 316.19740 * 11 10 7 13 13 C 1.53781 * 113.68890 * 87.46653 * 11 10 7 14 14 C 1.53781 * 87.08204 * 89.12339 * 13 11 10 15 15 O 1.42893 * 113.69298 * 270.87305 * 14 13 11 16 16 C 1.42902 * 114.00012 * 171.41457 * 15 14 13 17 17 C 1.53005 * 113.61332 * 139.97848 * 14 13 11 18 18 F 1.39901 * 109.46895 * 327.61059 * 17 14 13 19 19 F 1.39897 * 109.47053 * 207.60998 * 17 14 13 20 20 F 1.39894 * 109.46950 * 87.60580 * 17 14 13 21 21 C 1.53777 * 113.61204 * 185.00059 * 11 10 7 22 22 C 1.38637 * 119.85097 * 179.73115 * 5 4 3 23 23 Br 1.89099 * 120.00836 * 180.23463 * 22 5 4 24 24 C 1.38308 * 119.98356 * 0.24916 * 22 5 4 25 25 C 1.38255 * 120.13863 * 359.97438 * 24 22 5 26 26 C 1.50694 * 119.92653 * 180.02562 * 25 24 22 27 27 O 1.42902 * 109.47536 * 245.00051 * 26 25 24 28 28 Si 1.86302 * 109.47168 * 5.00240 * 26 25 24 29 29 C 1.38240 * 120.14979 * 0.02562 * 25 24 22 30 30 H 1.09000 * 109.46942 * 299.99824 * 1 2 3 31 31 H 1.09004 * 109.47449 * 59.99585 * 1 2 3 32 32 H 1.09002 * 109.47614 * 179.97438 * 1 2 3 33 33 H 1.09000 * 109.46942 * 240.00176 * 2 1 3 34 34 H 1.09001 * 109.46982 * 120.00620 * 2 1 3 35 35 H 1.09009 * 109.47101 * 59.99905 * 10 7 6 36 36 H 1.08996 * 109.47075 * 300.00073 * 10 7 6 37 37 H 1.08999 * 113.61084 * 334.57675 * 13 11 10 38 38 H 1.08993 * 113.61345 * 203.67768 * 13 11 10 39 39 H 1.09000 * 109.47283 * 305.24594 * 16 15 14 40 40 H 1.08994 * 109.47068 * 65.24649 * 16 15 14 41 41 H 1.09006 * 109.46865 * 185.24446 * 16 15 14 42 42 H 1.09002 * 113.61763 * 156.25153 * 21 11 10 43 43 H 1.08999 * 113.69646 * 25.35765 * 21 11 10 44 44 H 1.08003 * 119.93884 * 180.02562 * 24 22 5 45 45 H 1.09003 * 109.47421 * 124.99829 * 26 25 24 46 46 H 0.96697 * 114.00091 * 180.02562 * 27 26 25 47 47 H 1.48502 * 109.99828 * 299.99482 * 28 26 25 48 48 H 1.48498 * 110.00239 * 61.31629 * 28 26 25 49 49 H 1.07996 * 119.99266 * 180.02562 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.3545 1.5254 0.0005 5 6 3.8879 2.8103 0.0011 6 8 3.0620 3.8911 0.0017 7 16 2.6914 4.3877 -1.3885 8 8 3.9024 4.2991 -2.1266 9 8 2.0645 5.6417 -1.1570 10 6 1.4859 3.1758 -1.9956 11 6 1.0308 3.5698 -3.4022 12 1 0.8232 4.6356 -3.4969 13 6 1.9295 3.0155 -4.5203 14 6 1.0277 1.7698 -4.5199 15 8 1.4516 0.7545 -3.6082 16 6 0.5194 -0.3183 -3.4585 17 6 0.7327 1.2263 -5.9194 18 9 0.6903 2.2860 -6.8318 19 9 -0.5010 0.5667 -5.9130 20 9 1.7392 0.3293 -6.2929 21 6 -0.0855 2.6726 -3.9624 22 6 5.2630 2.9867 0.0073 23 35 5.9927 4.7312 0.0148 24 6 6.1009 1.8864 0.0077 25 6 5.5703 0.6097 0.0024 26 6 6.4878 -0.5858 0.0035 27 8 6.3313 -1.3075 -1.2200 28 14 8.2533 -0.0135 0.1654 29 6 4.2000 0.4273 -0.0037 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3634 -1.0277 -0.0005 33 1 1.8933 -0.5138 -0.8900 34 1 1.8933 -0.5139 0.8899 35 1 0.6244 3.1544 -1.3280 36 1 1.9468 2.1885 -2.0256 37 1 2.9516 2.8147 -4.1996 38 1 1.8801 3.5900 -5.4452 39 1 -0.4541 0.0829 -3.1766 40 1 0.4310 -0.8570 -4.4019 41 1 0.8704 -0.9990 -2.6829 42 1 -0.6858 3.1533 -4.7349 43 1 -0.6909 2.1943 -3.1924 44 1 7.1721 2.0246 0.0129 45 1 6.2379 -1.2349 0.8427 46 1 6.8926 -2.0919 -1.2884 47 1 8.6065 0.8723 -0.9730 48 1 8.4368 0.7110 1.4486 49 1 3.7883 -0.5711 -0.0074 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79967_17541816.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:50:33 Heat of formation + Delta-G solvation = -280.282696 kcal Electronic energy + Delta-G solvation = -47497.041072 eV Core-core repulsion = 41153.288893 eV Total energy + Delta-G solvation = -6343.752179 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 505.024 amu Computer time = 2.42 seconds Orbital eigenvalues (eV) -51.23117 -48.76809 -48.65801 -42.72574 -41.55403 -40.52362 -39.49330 -38.18359 -37.55241 -37.51438 -37.05250 -33.66154 -33.39184 -31.84065 -31.46900 -30.51780 -28.46049 -27.91483 -27.36546 -27.06264 -25.39997 -23.80379 -23.40040 -23.30467 -21.79104 -20.81498 -19.97754 -19.73836 -19.51982 -19.36626 -19.08216 -18.83112 -18.65211 -18.48471 -17.62480 -17.37713 -17.21875 -17.00341 -16.67080 -16.24455 -15.99193 -15.91692 -15.69580 -15.59665 -15.54856 -15.38888 -15.14910 -15.09708 -14.97030 -14.86987 -14.82925 -14.70311 -14.44122 -14.35526 -14.27712 -14.11080 -13.84870 -13.80210 -13.51229 -13.49344 -13.24249 -13.17349 -13.13098 -13.02441 -12.98949 -12.66743 -12.49792 -12.43613 -12.29397 -12.25800 -12.14148 -12.09586 -11.67837 -11.52199 -11.40089 -10.95012 -10.60155 -10.07308 -9.75897 -5.14094 -1.13445 -0.40957 -0.30510 0.20885 0.97279 1.04601 1.48640 1.50295 1.60198 1.82852 1.87737 1.91298 2.46455 2.54078 2.55289 2.76874 2.85202 2.94279 3.05047 3.21481 3.27745 3.30599 3.36931 3.41990 3.45114 3.61686 3.62371 3.68951 3.75215 3.86919 3.89139 4.01251 4.04885 4.07019 4.13031 4.24099 4.27039 4.32650 4.35144 4.39116 4.41837 4.47433 4.50720 4.54516 4.64650 4.67796 4.79751 4.82671 4.83495 4.95961 5.53180 5.76134 6.37361 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.047 3.953 3 O -0.303 6.303 4 C 0.142 3.858 5 C 0.062 3.938 6 O -0.645 6.645 7 S 2.579 3.421 8 O -0.936 6.936 9 O -0.920 6.920 10 C -0.632 4.632 11 C -0.092 4.092 12 H 0.108 0.892 13 C -0.126 4.126 14 C 0.044 3.956 15 O -0.330 6.330 16 C 0.008 3.992 17 C 0.437 3.563 18 F -0.173 7.173 19 F -0.181 7.181 20 F -0.173 7.173 21 C -0.134 4.134 22 C -0.024 4.024 23 Br 0.005 6.995 24 C -0.119 4.119 25 C -0.009 4.009 26 C -0.076 4.076 27 O -0.540 6.540 28 Si 0.678 3.322 29 C -0.150 4.150 30 H 0.072 0.928 31 H 0.069 0.931 32 H 0.085 0.915 33 H 0.074 0.926 34 H 0.072 0.928 35 H 0.147 0.853 36 H 0.154 0.846 37 H 0.108 0.892 38 H 0.125 0.875 39 H 0.057 0.943 40 H 0.054 0.946 41 H 0.099 0.901 42 H 0.112 0.888 43 H 0.097 0.903 44 H 0.145 0.855 45 H 0.085 0.915 46 H 0.388 0.612 47 H -0.241 1.241 48 H -0.247 1.247 49 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.383 -9.602 2.620 9.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.215 4.215 2 C -0.027 4.027 3 O -0.216 6.216 4 C 0.093 3.907 5 C 0.016 3.984 6 O -0.603 6.603 7 S 2.674 3.326 8 O -0.935 6.935 9 O -0.918 6.918 10 C -0.758 4.758 11 C -0.111 4.111 12 H 0.126 0.874 13 C -0.163 4.163 14 C 0.001 3.999 15 O -0.247 6.247 16 C -0.088 4.088 17 C 0.382 3.618 18 F -0.154 7.154 19 F -0.162 7.162 20 F -0.154 7.154 21 C -0.173 4.173 22 C -0.106 4.106 23 Br 0.091 6.909 24 C -0.139 4.139 25 C -0.011 4.011 26 C -0.186 4.186 27 O -0.347 6.347 28 Si 0.578 3.422 29 C -0.169 4.169 30 H 0.091 0.909 31 H 0.088 0.912 32 H 0.104 0.896 33 H 0.092 0.908 34 H 0.090 0.910 35 H 0.165 0.835 36 H 0.172 0.828 37 H 0.127 0.873 38 H 0.143 0.857 39 H 0.075 0.925 40 H 0.073 0.927 41 H 0.117 0.883 42 H 0.130 0.870 43 H 0.115 0.885 44 H 0.163 0.837 45 H 0.103 0.897 46 H 0.236 0.764 47 H -0.165 1.165 48 H -0.171 1.171 49 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 0.329 -6.950 2.878 7.530 hybrid contribution -1.619 -1.223 -0.387 2.066 sum -1.291 -8.174 2.491 8.642 Atomic orbital electron populations 1.21885 0.91849 1.03655 1.04085 1.23098 0.96591 0.80565 1.02488 1.86183 1.16681 1.31187 1.87559 1.18773 0.84244 0.91506 0.96211 1.16718 0.86627 0.81191 1.13832 1.85772 1.67068 1.49763 1.57672 1.06117 0.76487 0.76349 0.73620 1.93699 1.41128 1.86644 1.71981 1.93659 1.78342 1.37456 1.82343 1.30812 1.19275 1.20003 1.05715 1.21726 0.97497 1.01230 0.90659 0.87370 1.23495 1.00343 0.91483 1.00999 1.23945 1.01221 0.89782 0.84904 1.88058 1.44210 1.32274 1.60189 1.23196 0.93520 0.89258 1.02787 1.21127 0.74521 0.76342 0.89802 1.93188 1.96147 1.56524 1.69588 1.93197 1.44407 1.81672 1.96957 1.93226 1.60490 1.68886 1.92834 1.23565 0.95724 0.96000 1.01972 1.21682 0.92032 0.94468 1.02464 1.96888 1.83419 1.13791 1.96753 1.20749 0.99651 0.90371 1.03138 1.19313 0.93517 0.92995 0.95237 1.24691 1.08903 0.94433 0.90599 1.86493 1.68283 1.44023 1.35934 0.95149 0.78746 0.86765 0.81534 1.21113 0.92680 0.98436 1.04685 0.90901 0.91237 0.89595 0.90820 0.90985 0.83522 0.82837 0.87324 0.85688 0.92466 0.92736 0.88301 0.86959 0.88466 0.83738 0.89666 0.76382 1.16530 1.17131 0.82642 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.73 10.28 37.16 0.38 1.11 16 2 C 0.05 -0.17 5.46 37.16 0.20 0.04 16 3 O -0.30 0.17 7.17 -34.23 -0.25 -0.07 16 4 C 0.14 0.16 5.83 -39.13 -0.23 -0.07 16 5 C 0.06 0.22 4.80 -39.11 -0.19 0.03 16 6 O -0.64 -2.83 9.19 -54.30 -0.50 -3.33 16 7 S 2.58 10.44 5.09 -107.50 -0.55 9.89 16 8 O -0.94 -5.02 14.93 -67.04 -1.00 -6.02 16 9 O -0.92 -6.33 18.09 -67.04 -1.21 -7.55 16 10 C -0.63 -0.10 4.12 37.16 0.15 0.05 16 11 C -0.09 0.07 3.84 -89.81 -0.34 -0.28 16 12 H 0.11 -0.19 8.13 -51.93 -0.42 -0.61 16 13 C -0.13 0.02 6.89 -25.92 -0.18 -0.16 16 14 C 0.04 -0.01 0.86 -89.80 -0.08 -0.09 16 15 O -0.33 0.14 8.38 -35.23 -0.30 -0.16 16 16 C 0.01 -0.02 9.78 101.05 0.99 0.97 16 17 C 0.44 0.42 2.30 37.16 0.09 0.51 16 18 F -0.17 -0.22 15.82 2.25 0.04 -0.18 16 19 F -0.18 -0.16 15.34 2.25 0.03 -0.12 16 20 F -0.17 -0.44 16.89 2.25 0.04 -0.41 16 21 C -0.13 0.27 6.54 -25.92 -0.17 0.10 16 22 C -0.02 -0.10 5.58 -39.41 -0.22 -0.32 16 23 Br 0.00 0.02 31.62 -68.01 -2.15 -2.13 16 24 C -0.12 -0.28 8.40 -39.55 -0.33 -0.62 16 25 C -0.01 0.00 5.38 -104.62 -0.56 -0.57 16 26 C -0.08 0.18 2.79 36.00 0.10 0.28 16 27 O -0.54 1.22 12.81 -35.23 -0.45 0.77 16 28 Si 0.68 -1.64 29.84 -169.99 -5.07 -6.72 16 29 C -0.15 0.04 8.67 -39.45 -0.34 -0.30 16 30 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 31 H 0.07 -0.32 7.64 -51.93 -0.40 -0.72 16 32 H 0.09 -0.52 8.14 -51.93 -0.42 -0.94 16 33 H 0.07 -0.33 6.60 -51.93 -0.34 -0.67 16 34 H 0.07 -0.34 7.67 -51.93 -0.40 -0.73 16 35 H 0.15 -0.27 8.11 -51.92 -0.42 -0.69 16 36 H 0.15 -0.02 4.03 -51.93 -0.21 -0.23 16 37 H 0.11 0.07 8.10 -51.93 -0.42 -0.35 16 38 H 0.13 -0.19 7.01 -51.93 -0.36 -0.55 16 39 H 0.06 -0.22 6.85 -51.93 -0.36 -0.57 16 40 H 0.05 -0.09 6.53 -51.93 -0.34 -0.43 16 41 H 0.10 -0.44 7.09 -51.93 -0.37 -0.81 16 42 H 0.11 -0.34 8.06 -51.93 -0.42 -0.76 16 43 H 0.10 -0.32 7.21 -51.93 -0.37 -0.69 16 44 H 0.15 0.24 4.85 -52.48 -0.25 -0.02 16 45 H 0.09 -0.40 7.96 -51.93 -0.41 -0.82 16 46 H 0.39 -2.76 8.74 45.56 0.40 -2.36 16 47 H -0.24 -0.22 7.05 56.52 0.40 0.17 16 48 H -0.25 0.03 7.11 56.52 0.40 0.43 16 49 H 0.16 -0.46 6.30 -52.49 -0.33 -0.79 16 LS Contribution 428.03 15.07 6.45 6.45 Total: 0.00 -10.62 428.03 -11.13 -21.75 By element: Atomic # 1 Polarization: -7.37 SS G_CDS: -5.48 Total: -12.85 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -0.73 Total: 0.68 kcal Atomic # 8 Polarization: -12.66 SS G_CDS: -3.70 Total: -16.36 kcal Atomic # 9 Polarization: -0.82 SS G_CDS: 0.11 Total: -0.71 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.07 Total: -6.72 kcal Atomic # 16 Polarization: 10.44 SS G_CDS: -0.55 Total: 9.89 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.15 Total: -2.13 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -10.62 -11.13 -21.75 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79967_17541816.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -258.534 kcal (2) G-P(sol) polarization free energy of solvation -10.623 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -269.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.748 kcal (6) G-S(sol) free energy of system = (1) + (5) -280.283 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.42 seconds