Wall clock time and date at job start Mon Mar 8 2021 11:48:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86294 * 109.47276 * 2 1 4 4 C 1.50703 * 109.47171 * 120.00397 * 2 1 3 5 5 C 1.38242 * 119.94654 * 64.72618 * 4 2 1 6 6 C 1.38166 * 120.05297 * 179.72754 * 5 4 2 7 7 N 1.48006 * 120.02771 * 180.27774 * 6 5 4 8 8 O 1.21798 * 119.99698 * 359.17107 * 7 6 5 9 9 O 1.21799 * 120.00245 * 179.18360 * 7 6 5 10 10 C 1.38712 * 119.94447 * 0.54004 * 6 5 4 11 11 O 1.35899 * 120.05386 * 179.70464 * 10 6 5 12 12 S 1.52204 * 113.99783 * 92.78269 * 11 10 6 13 13 O 1.42099 * 104.27572 * 191.70732 * 12 11 10 14 14 O 1.42100 * 104.27577 * 319.56930 * 12 11 10 15 15 C 1.81396 * 104.44837 * 75.63594 * 12 11 10 16 16 H 1.09009 * 112.85232 * 44.80924 * 15 12 11 17 17 C 1.53781 * 113.61437 * 176.00597 * 15 12 11 18 18 C 1.53784 * 87.08129 * 139.98240 * 17 15 12 19 19 H 1.08997 * 113.61325 * 219.93060 * 18 17 15 20 20 O 1.42898 * 113.61534 * 89.11797 * 18 17 15 21 21 C 1.42903 * 114.00127 * 149.99935 * 20 18 17 22 22 C 1.50701 * 109.47165 * 179.97438 * 21 20 18 23 23 C 1.38236 * 120.00090 * 269.72957 * 22 21 20 24 24 C 1.38231 * 119.99981 * 179.79026 * 23 22 21 25 25 C 1.38242 * 119.99880 * 0.43550 * 24 23 22 26 26 C 1.38233 * 119.99906 * 359.81272 * 25 24 23 27 27 C 1.38233 * 119.99735 * 89.99950 * 22 21 20 28 28 C 1.53777 * 87.08164 * 334.56539 * 18 17 15 29 29 C 1.38750 * 119.88579 * 359.73302 * 10 6 5 30 30 C 1.38115 * 119.94697 * 359.97438 * 29 10 6 31 31 H 0.96706 * 113.99727 * 299.99828 * 1 2 3 32 32 H 1.09000 * 109.46893 * 239.99958 * 2 1 3 33 33 H 1.48509 * 109.99875 * 300.00320 * 3 2 1 34 34 H 1.48498 * 110.00194 * 61.31844 * 3 2 1 35 35 H 1.08007 * 119.97229 * 359.97438 * 5 4 2 36 36 H 1.09008 * 113.61527 * 254.52767 * 17 15 12 37 37 H 1.08992 * 113.61318 * 25.43168 * 17 15 12 38 38 H 1.08994 * 109.46857 * 299.99590 * 21 20 18 39 39 H 1.08996 * 109.46713 * 59.99784 * 21 20 18 40 40 H 1.08001 * 120.00092 * 359.97438 * 23 22 21 41 41 H 1.07999 * 120.00120 * 180.27106 * 24 23 22 42 42 H 1.08004 * 119.99811 * 179.83651 * 25 24 23 43 43 H 1.08005 * 119.99460 * 179.97438 * 26 25 24 44 44 H 1.07995 * 120.00603 * 359.97438 * 27 22 21 45 45 H 1.08998 * 113.61897 * 270.88564 * 28 18 17 46 46 H 1.09005 * 113.61162 * 139.98126 * 28 18 17 47 47 H 1.08004 * 120.02562 * 180.02562 * 29 10 6 48 48 H 1.08005 * 119.97074 * 180.02562 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6792 -2.0591 1.3998 6 6 2.1436 -2.7140 2.5243 7 7 1.8786 -4.1592 2.7022 8 8 1.2380 -4.7685 1.8644 9 8 2.3009 -4.7393 3.6864 10 6 2.8536 -2.0146 3.4891 11 8 3.3062 -2.6552 4.5989 12 16 4.7260 -3.1883 4.4702 13 8 4.8848 -4.0381 5.5979 14 8 4.7875 -3.7059 3.1482 15 6 5.7774 -1.7185 4.6277 16 1 5.4706 -1.0640 5.4436 17 6 7.2824 -2.0344 4.6241 18 6 7.4638 -0.7795 3.7539 19 1 8.1945 -0.9042 2.9548 20 8 7.6663 0.4165 4.5092 21 6 8.4688 1.3946 3.8449 22 6 8.6155 2.6075 4.7273 23 6 7.7020 3.6412 4.6388 24 6 7.8341 4.7518 5.4512 25 6 8.8849 4.8326 6.3459 26 6 9.8013 3.8011 6.4308 27 6 9.6667 2.6887 5.6213 28 6 6.0091 -0.9814 3.2980 29 6 3.1005 -0.6598 3.3194 30 6 2.6393 -0.0111 2.1906 31 1 -0.3933 0.4417 0.7651 32 1 1.7923 -0.5138 -0.8900 33 1 1.5614 2.4679 -1.2085 34 1 1.5879 2.4585 1.2242 35 1 1.1222 -2.6022 0.6506 36 1 7.7476 -1.9553 5.6068 37 1 7.5325 -2.9623 4.1099 38 1 9.4531 0.9758 3.6359 39 1 7.9901 1.6824 2.9090 40 1 6.8834 3.5799 3.9370 41 1 7.1180 5.5574 5.3852 42 1 8.9896 5.7014 6.9788 43 1 10.6224 3.8645 7.1295 44 1 10.3827 1.8829 5.6877 45 1 5.9111 -1.6214 2.4212 46 1 5.4461 -0.0521 3.2101 47 1 3.6534 -0.1131 4.0689 48 1 2.8316 1.0434 2.0579 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_80028_15608174.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:48:55 Heat of formation + Delta-G solvation = -69.859344 kcal Electronic energy + Delta-G solvation = -39818.039021 eV Core-core repulsion = 34517.427846 eV Total energy + Delta-G solvation = -5300.611175 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.105 amu Computer time = 3.73 seconds Orbital eigenvalues (eV) -43.59675 -42.23811 -41.02558 -40.49587 -40.12329 -38.41308 -37.99080 -37.50324 -37.27847 -37.22047 -33.71835 -32.94018 -32.80165 -31.95171 -27.97342 -27.76135 -27.55314 -27.32864 -26.70879 -24.52501 -23.77234 -23.64134 -22.45499 -22.34234 -21.30647 -20.37170 -19.96071 -19.70313 -19.18911 -18.90995 -18.64348 -18.34956 -18.04575 -17.69922 -17.47169 -17.01721 -16.84952 -16.69423 -16.60429 -16.25075 -16.15494 -15.65457 -15.51103 -15.26285 -15.10941 -14.74263 -14.65698 -14.45960 -14.29392 -14.15010 -14.00434 -13.78961 -13.76456 -13.66767 -13.52765 -13.39038 -13.29833 -13.22091 -12.74765 -12.57809 -12.40641 -12.25536 -12.23927 -12.14316 -12.07614 -12.07067 -11.97149 -11.43669 -11.23264 -11.13476 -10.86185 -10.66065 -9.96376 -9.91310 -5.36843 -1.72326 -1.16584 -0.70430 0.06154 0.14966 0.18014 0.36029 0.67239 0.81765 1.18330 1.51260 1.63000 2.17381 2.24528 2.51430 2.61611 2.72196 2.79900 2.85865 2.96954 2.98695 3.11000 3.17214 3.22786 3.27453 3.52216 3.67577 3.71704 3.78854 3.88720 3.90264 3.95900 4.06465 4.08998 4.09731 4.11011 4.13315 4.18900 4.23493 4.29773 4.37584 4.45383 4.50874 4.54127 4.59163 4.59812 4.71757 4.90461 4.97845 5.26748 5.39671 5.48054 5.49289 5.89824 5.94324 5.97510 6.57304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.080 4.080 3 Si 0.690 3.310 4 C -0.102 4.102 5 C -0.012 4.012 6 C -0.023 4.023 7 N 0.032 4.968 8 O -0.131 6.131 9 O -0.152 6.152 10 C 0.148 3.852 11 O -0.651 6.651 12 S 2.595 3.405 13 O -0.901 6.901 14 O -0.945 6.945 15 C -0.642 4.642 16 H 0.164 0.836 17 C -0.107 4.107 18 C 0.082 3.918 19 H 0.091 0.909 20 O -0.355 6.355 21 C 0.101 3.899 22 C -0.096 4.096 23 C -0.099 4.099 24 C -0.124 4.124 25 C -0.112 4.112 26 C -0.122 4.122 27 C -0.098 4.098 28 C -0.142 4.142 29 C -0.126 4.126 30 C -0.053 4.053 31 H 0.380 0.620 32 H 0.133 0.867 33 H -0.246 1.246 34 H -0.253 1.253 35 H 0.173 0.827 36 H 0.104 0.896 37 H 0.106 0.894 38 H 0.063 0.937 39 H 0.063 0.937 40 H 0.123 0.877 41 H 0.124 0.876 42 H 0.124 0.876 43 H 0.125 0.875 44 H 0.124 0.876 45 H 0.115 0.885 46 H 0.099 0.901 47 H 0.171 0.829 48 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.701 10.622 -3.426 12.111 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.189 4.189 3 Si 0.589 3.411 4 C -0.104 4.104 5 C -0.031 4.031 6 C -0.108 4.108 7 N 0.555 4.445 8 O -0.352 6.352 9 O -0.366 6.366 10 C 0.105 3.895 11 O -0.608 6.608 12 S 2.690 3.310 13 O -0.899 6.899 14 O -0.943 6.943 15 C -0.750 4.750 16 H 0.182 0.818 17 C -0.145 4.145 18 C 0.022 3.978 19 H 0.109 0.891 20 O -0.274 6.274 21 C 0.025 3.975 22 C -0.096 4.096 23 C -0.117 4.117 24 C -0.142 4.142 25 C -0.130 4.130 26 C -0.140 4.140 27 C -0.116 4.116 28 C -0.180 4.180 29 C -0.146 4.146 30 C -0.071 4.071 31 H 0.228 0.772 32 H 0.151 0.849 33 H -0.171 1.171 34 H -0.177 1.177 35 H 0.191 0.809 36 H 0.123 0.877 37 H 0.124 0.876 38 H 0.082 0.918 39 H 0.082 0.918 40 H 0.141 0.859 41 H 0.142 0.858 42 H 0.142 0.858 43 H 0.143 0.857 44 H 0.142 0.858 45 H 0.133 0.867 46 H 0.117 0.883 47 H 0.188 0.812 48 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 4.323 11.154 -3.714 12.526 hybrid contribution -0.798 -0.180 0.903 1.218 sum 3.526 10.974 -2.811 11.864 Atomic orbital electron populations 1.86696 1.16667 1.79861 1.49451 1.25226 0.84749 1.11587 0.97343 0.95118 0.91069 0.73381 0.81495 1.20589 0.98593 0.93153 0.98089 1.21012 0.93840 0.94114 0.94163 1.21352 1.07766 0.82507 0.99200 1.43195 0.98928 1.02211 1.00189 1.94570 1.36863 1.66238 1.37551 1.94584 1.53257 1.68825 1.19980 1.17651 0.98261 0.91143 0.82481 1.85858 1.54307 1.75854 1.44829 1.05752 0.73677 0.76456 0.75102 1.93672 1.82659 1.61330 1.52225 1.93644 1.84084 1.76998 1.39567 1.32309 1.12750 1.21058 1.08871 0.81780 1.22868 0.89157 0.98548 1.03958 1.22780 0.95614 0.85465 0.93935 0.89066 1.87984 1.71199 1.25423 1.42833 1.21460 0.95100 0.86886 0.94026 1.19536 0.96427 0.94947 0.98699 1.21052 0.98085 0.93502 0.99086 1.21198 0.98421 0.98225 0.96321 1.21285 0.94632 0.98801 0.98244 1.21218 0.99499 0.93948 0.99368 1.21099 0.97642 0.97967 0.94878 1.23519 0.99359 1.01689 0.93431 1.21528 1.02084 0.90841 1.00152 1.21423 0.93325 1.01121 0.91242 0.77185 0.84931 1.17057 1.17731 0.80949 0.87706 0.87590 0.91844 0.91834 0.85907 0.85758 0.85805 0.85702 0.85849 0.86671 0.88305 0.81199 0.82144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 32. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 1.32 12.83 -35.23 -0.45 0.87 16 2 C -0.08 0.36 2.80 36.01 0.10 0.46 16 3 Si 0.69 -3.77 29.88 -169.99 -5.08 -8.85 16 4 C -0.10 0.40 5.35 -104.60 -0.56 -0.16 16 5 C -0.01 0.01 9.18 -39.61 -0.36 -0.35 16 6 C -0.02 -0.05 6.17 -79.80 -0.49 -0.54 16 7 N 0.03 0.19 4.32 34.03 0.15 0.34 16 8 O -0.13 -0.79 18.45 -29.46 -0.54 -1.33 16 9 O -0.15 -1.24 15.65 -38.74 -0.61 -1.85 16 10 C 0.15 0.09 4.67 -39.22 -0.18 -0.09 16 11 O -0.65 -1.69 8.45 -54.89 -0.46 -2.16 16 12 S 2.59 6.52 4.45 -107.50 -0.48 6.04 16 13 O -0.90 -5.89 18.09 -67.04 -1.21 -7.10 16 14 O -0.94 -3.83 14.38 -69.44 -1.00 -4.83 16 15 C -0.64 1.39 3.50 -25.92 -0.09 1.30 16 16 H 0.16 -0.60 8.14 -51.92 -0.42 -1.02 16 17 C -0.11 0.26 7.50 -25.92 -0.19 0.07 16 18 C 0.08 -0.28 4.37 -25.92 -0.11 -0.39 16 19 H 0.09 -0.47 7.87 -51.93 -0.41 -0.88 16 20 O -0.36 0.62 10.26 -35.23 -0.36 0.26 16 21 C 0.10 -0.29 5.90 36.01 0.21 -0.07 16 22 C -0.10 0.10 5.51 -104.62 -0.58 -0.47 16 23 C -0.10 0.14 9.70 -39.58 -0.38 -0.24 16 24 C -0.12 0.14 10.05 -39.58 -0.40 -0.25 16 25 C -0.11 0.09 10.05 -39.58 -0.40 -0.30 16 26 C -0.12 0.08 10.05 -39.58 -0.40 -0.31 16 27 C -0.10 0.07 9.70 -39.58 -0.38 -0.32 16 28 C -0.14 0.59 5.78 -25.92 -0.15 0.44 16 29 C -0.13 0.48 7.02 -39.44 -0.28 0.20 16 30 C -0.05 0.29 8.66 -39.61 -0.34 -0.05 16 31 H 0.38 -2.09 8.70 45.56 0.40 -1.69 16 32 H 0.13 -0.72 7.96 -51.93 -0.41 -1.13 16 33 H -0.25 0.37 7.11 56.52 0.40 0.77 16 34 H -0.25 1.05 7.01 56.52 0.40 1.44 16 35 H 0.17 -0.28 7.61 -52.48 -0.40 -0.68 16 36 H 0.10 -0.25 8.14 -51.92 -0.42 -0.67 16 37 H 0.11 -0.37 8.10 -51.93 -0.42 -0.79 16 38 H 0.06 -0.23 8.09 -51.93 -0.42 -0.65 16 39 H 0.06 -0.29 8.08 -51.93 -0.42 -0.71 16 40 H 0.12 -0.44 8.06 -52.49 -0.42 -0.86 16 41 H 0.12 -0.36 8.06 -52.49 -0.42 -0.78 16 42 H 0.12 -0.30 8.06 -52.48 -0.42 -0.72 16 43 H 0.12 -0.27 8.06 -52.48 -0.42 -0.70 16 44 H 0.12 -0.24 8.06 -52.49 -0.42 -0.66 16 45 H 0.12 -0.53 7.36 -51.93 -0.38 -0.91 16 46 H 0.10 -0.64 6.32 -51.93 -0.33 -0.97 16 47 H 0.17 -1.15 6.64 -52.48 -0.35 -1.50 16 48 H 0.16 -1.35 4.84 -52.48 -0.25 -1.60 16 LS Contribution 415.00 15.07 6.25 6.25 Total: 0.00 -13.83 415.00 -14.35 -28.18 By element: Atomic # 1 Polarization: -9.16 SS G_CDS: -5.56 Total: -14.73 kcal Atomic # 6 Polarization: 3.89 SS G_CDS: -4.99 Total: -1.10 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: 0.15 Total: 0.34 kcal Atomic # 8 Polarization: -11.50 SS G_CDS: -4.64 Total: -16.14 kcal Atomic # 14 Polarization: -3.77 SS G_CDS: -5.08 Total: -8.85 kcal Atomic # 16 Polarization: 6.52 SS G_CDS: -0.48 Total: 6.04 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -13.83 -14.35 -28.18 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80028_15608174.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.678 kcal (2) G-P(sol) polarization free energy of solvation -13.833 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.348 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.181 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.859 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.73 seconds